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36 1 Amino Acids, Peptides, Proteins

acids:

(1.74)

The first three letters of the amino acids

are used as symbols to simplify designation

of peptides (cf. Table 1.1). Thus,

the peptide shown above can also be given

as:

Ala Ser Gly or ASG (1.75)

One-letter symbols (cf. Table 1.1) are used

for amino acid sequences of long peptide

chains.

D-Amino acids are denoted by the prefix D-. In

compounds in which a functional group of the

side chain is involved, the bond is indicated by

a perpendicular line. The tripeptide glutathione

(γ-glutamyl-cysteinyl-glycine) is given as an illustration

along with its corresponding disulfide,

oxidized glutathione:

Table 1.13. Dissociation constants and isoelectric

points of various peptides (25 ◦ C)

Peptide pK 1 pK 2 pK 3 pK 4 pK 5 pl

Gly-Gly 3.12 8.17 5.65

Gly-Gly-Gly 3.26 7.91 5.59

Ala-Ala 3.30 8.14 5.72

Gly-Asp 2.81 4.45 8.60 3.63

Asp-Gly 2.10 4.53 9.07 3.31

Asp-Asp 2.70 3.40 4.70 8.26 3.04

Lys-Ala 3.22 7.62 10.70 9.16

Ala-Lys-Ala 3.15 7.65 10.30 8.98

Lys-Lys 3.01 7.53 10.05 11.01 10.53

Lys-Lys-Lys 3.08 7.34 9.80 10.54 11.32 10.93

Lys-Glu 2.93 4.47 7.75 10.50 6.10

His-His 2.25 5.60 6.80 7.80 7.30

1.3.3 Sensory Properties

While the taste quality of amino acids does

depend on configuration, peptides, except for

the sweet dipeptide esters of aspartic acid (see

below), are neutral or bitter in taste with no

relationship to configuration (Table 1.14). As

(1.76)

By convention, the amino acid residue with the

free amino group is always placed on the left.

The amino acids of the chain ends are denoted as

N-terminal and C-terminal amino acid residues.

The peptide linkage direction in cyclic peptides is

indicated by an arrow, i. e., CO → NH-.

1.3.2 Physical Properties

1.3.2.1 Dissociation

The pK values and isoelectric points for some

peptides are listed in Table 1.13. The acidity of

the free carboxyl groups and the basicity of the

free amino groups are lower in peptides than in

the corresponding free amino acids. The amino

acid sequence also has an influence (e. g., Gly-

Asp/Asp-Gly).

Table 1.14. Taste threshold values of various peptides:

effect of configuration and amino acid sequence (tested

in aqueous solution at pH 6–7); bi – bitter

Peptide a

Taste

Quality

Intensity b

Gly-Leu bi 19–23

Gly-D-Leu bi 20–23

Gly-Phe bi 15–17

Gly-D-Phe bi 15–17

Leu-Leu bi 4–5

Leu-D-Leu bi 5–6

D-Leu-D-Leu bi 5–6

Ala-Leu bi 18–22

Leu-Ala bi 18–21

Gly-Leu bi 19–23

Leu-Gly bi 18–21

Ala-Val bi 60–80

Val-Ala bi 65–75

Phe-Gly bi 16–18

Gly-Phe bi 15–17

Phe-Gly-Phe-Gly bi 1.0–1.5

Phe-Gly-Gly-Phe bi 1.0–1.5

a L-Configuration if not otherwise designated.

b Recognition threshold value in mmol/l .

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