Darwin's Dangerous Idea - Evolution and the Meaning of Life
Darwin's Dangerous Idea - Evolution and the Meaning of Life
Darwin's Dangerous Idea - Evolution and the Meaning of Life
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160 PRIMING DARWIN'S PUMP Molecular <strong>Evolution</strong> 161<br />
fragments <strong>of</strong> self-replicating nucleotide strings that will eventually come to<br />
"specify" <strong>the</strong>m in <strong>the</strong> macros <strong>the</strong>y compose. Eigen shows how <strong>the</strong> vicious<br />
circle can turn friendly if it is exp<strong>and</strong>ed into a "hypercycle" with more than<br />
two elements (Eigen <strong>and</strong> Schuster 1977). This is a difficult technical concept,<br />
but <strong>the</strong> underlying idea is clear enough: imagine a circumstance in which<br />
fragments <strong>of</strong> type A can enhance <strong>the</strong> prospects <strong>of</strong> hunks <strong>of</strong> B, which in turn<br />
promote <strong>the</strong> well-being <strong>of</strong> bits <strong>of</strong> C, which, completing <strong>the</strong> loop, permit <strong>the</strong><br />
replication <strong>of</strong> more fragments <strong>of</strong> A, <strong>and</strong> so forth, in a mutually reinforcing<br />
community <strong>of</strong> elements, until <strong>the</strong> point is reached where <strong>the</strong> whole process<br />
can take <strong>of</strong>f, creating environments that normally serve to replicate longer<br />
<strong>and</strong> longer strings <strong>of</strong> genetic material. (Maynard Smith 1979 is a great help in<br />
underst<strong>and</strong>ing <strong>the</strong> idea <strong>of</strong> a hypercycle; see also Eigen 1983.)<br />
But even if this is possible in principle, how could it get started? If all<br />
possible proteins <strong>and</strong> all possible nucleotide "texts" were truly equiproba-ble,<br />
<strong>the</strong>n it would be hard to see how <strong>the</strong> process could ever get going. Somehow,<br />
<strong>the</strong> bl<strong>and</strong>, mixed-up confetti <strong>of</strong> ingredients has to get some structure imposed<br />
on it, concentrating a few "likely-to-succeed" c<strong>and</strong>idates <strong>and</strong> <strong>the</strong>reby making<br />
<strong>the</strong>m still more likely to succeed. Remember <strong>the</strong> coin-tossing tournament in<br />
chapter 2? Somebody has to win, but <strong>the</strong> winner wins in virtue <strong>of</strong> no virtue,<br />
but simply in virtue <strong>of</strong> historical accident. The winner is not bigger or<br />
stronger or better than <strong>the</strong> o<strong>the</strong>r contestants, but is still <strong>the</strong> winner. It now<br />
seems that something similar happens in prebiotic molecular evolution, with<br />
a Darwinian twist: winners get to make extra copies <strong>of</strong> <strong>the</strong>mselves for <strong>the</strong><br />
next round, so that, without any selection "for cause" (as <strong>the</strong>y say when<br />
dismissing potential jurors), dynasties <strong>of</strong> sheer replicative prowess begin to<br />
emerge. If we start with a purely r<strong>and</strong>om assortment <strong>of</strong> "contestants" drawn<br />
from <strong>the</strong> pool <strong>of</strong> self-replicating fragments, even if <strong>the</strong>y are not initially<br />
distinguishable in terms <strong>of</strong> <strong>the</strong>ir replicative prowess, those that happen to win<br />
in <strong>the</strong> early rounds will occupy more <strong>of</strong> <strong>the</strong> slots in <strong>the</strong> subsequent rounds,<br />
flooding <strong>the</strong> space with trails <strong>of</strong> highly similar (short) texts, but still leaving<br />
vast hypervolumes <strong>of</strong> <strong>the</strong> space utterly empty <strong>and</strong> inaccessible for good. The<br />
initial threads <strong>of</strong> proto-life can emerge before <strong>the</strong>re is any difference in skill,<br />
becoming <strong>the</strong> actuality from which <strong>the</strong> Tree <strong>of</strong> <strong>Life</strong> can <strong>the</strong>n grow, thanks to<br />
tournaments <strong>of</strong> skill. As Eigen's colleague Bernd-Olaf Küppers (1990, p.<br />
150) puts it, "The <strong>the</strong>ory predicts that biological structures exist, but not what<br />
biological structures exist." 3 This is<br />
3. Kiippers (1990, pp. 137-46) borrows an example from Eigen (1976) to illustrate <strong>the</strong><br />
underlying idea: a game <strong>of</strong> "non-Darwinian selection" you can play on a checkerboard<br />
with differently colored marbles. Start by r<strong>and</strong>omly placing <strong>the</strong> marbles on all <strong>the</strong> squares,<br />
creating <strong>the</strong> initial confetti effect. Now throw two (eight-sided!) dice to determine a<br />
square (column 5, row 7, for instance) on which to act. Remove <strong>the</strong> marble on that<br />
enough to build plenty <strong>of</strong> bias into <strong>the</strong> probability space from <strong>the</strong> outset.<br />
So some <strong>of</strong> <strong>the</strong> possible macros, inevitably, are more probable—more<br />
likely to be stumbled upon in <strong>the</strong> Vast space <strong>of</strong> possibilities—than o<strong>the</strong>rs.<br />
Which ones? The "fitter" ones? Not in any nontrivial sense, but just in <strong>the</strong><br />
tautological sense <strong>of</strong> being identical to (or nearly identical to) previous<br />
"winners," who in turn tended to be almost identical to still earlier "winners."<br />
(In <strong>the</strong> million-dimension Library <strong>of</strong> Mendel, sequences that differ at a single<br />
locus are shelved "next to" each o<strong>the</strong>r in some dimension; <strong>the</strong> distance <strong>of</strong> any<br />
one volume from ano<strong>the</strong>r is technically known as <strong>the</strong> Hamming distance.<br />
This process spreads "winners" out gradually—taking leaps <strong>of</strong> small<br />
Hamming distances—from any initial starting point in any <strong>and</strong> all directions<br />
in <strong>the</strong> Library.) This is <strong>the</strong> most rudimentary possible case <strong>of</strong> "<strong>the</strong> rich get<br />
richer," <strong>and</strong> since <strong>the</strong> success <strong>of</strong> <strong>the</strong> string has an explanation with no<br />
reference beyond <strong>the</strong> string itself <strong>and</strong> its resemblance as a string to its parent<br />
string, this is a purely syntactic definition <strong>of</strong> fitness, as opposed to a semantic<br />
definition <strong>of</strong> fitness (Kiippers 1990, p. 141). That is, you don't have to<br />
consider what <strong>the</strong> string means in order to determine its fitness. We saw in<br />
chapter 6 that mere typographical change could never explain <strong>the</strong> Design that<br />
needs explaining, any more than you could explain <strong>the</strong> difference in quality<br />
between two books by comparing <strong>the</strong>ir relative frequencies <strong>of</strong> alphabetic<br />
characters, but before we can have <strong>the</strong> meaningful self-replicating codes that<br />
make this possible, we have to have self-replicating codes that don't mean a<br />
thing; <strong>the</strong>ir only "function" is to replicate <strong>the</strong>mselves. As Eigen (1992, p. 15)<br />
puts it, "The structural stability <strong>of</strong> <strong>the</strong> molecule has no bearing upon <strong>the</strong><br />
semantic information which it carries, <strong>and</strong> which is not expressed until <strong>the</strong><br />
product <strong>of</strong> translation appears."<br />
This is <strong>the</strong> birth <strong>of</strong> <strong>the</strong> ultimate QWERTY phenomenon, but, like <strong>the</strong><br />
cultural case that gives it its name, it was not entirely without point even<br />
from <strong>the</strong> outset. Perfect equiprobability could have dissolved into a monopoly<br />
by a purely r<strong>and</strong>om process, as we have just seen, but perfect<br />
equiprobability is hard to come by in nature at any point, <strong>and</strong> at <strong>the</strong> very<br />
beginnings <strong>of</strong> this process <strong>of</strong> text generation, a bias was present. Of <strong>the</strong> four<br />
bases—A, C, G, <strong>and</strong> T—G <strong>and</strong> C are <strong>the</strong> most structurally stable: "Calculation<br />
<strong>of</strong> <strong>the</strong> necessary binding energies, along with experiments on binding<br />
square. Throw <strong>the</strong> dice again; go to <strong>the</strong> square <strong>the</strong>y name <strong>and</strong> check <strong>the</strong> color <strong>of</strong> <strong>the</strong><br />
marble on this square <strong>and</strong> put a marble <strong>of</strong> that color on <strong>the</strong> just-vacated square ( "reproduction"<br />
<strong>of</strong> that marble). Repeat <strong>the</strong> process, over <strong>and</strong> over. Eventually, it has <strong>the</strong> effect<br />
<strong>of</strong> unr<strong>and</strong>omizing <strong>the</strong> initial distribution <strong>of</strong> colors, so that one color ends up "winning"<br />
but for no reason at all—just historical luck. He calls this "non-Darwinian selection"<br />
because it is selection in <strong>the</strong> absence <strong>of</strong> a biasing cause; selection without adaptation<br />
would be <strong>the</strong> more familiar term. It is non-Darwinian only in <strong>the</strong> sense that Darwin didn't<br />
see <strong>the</strong> importance <strong>of</strong> allowing for it, not in <strong>the</strong> sense that Darwin ( or Darwinism ) cannot<br />
accommodate it. Manifestly it can.