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Enzymatic Digestion 521<br />

11. Modification of cysteine residues with MNS provides the advantage that the resulting<br />

S-methyl cysteine phenylthiohydantoin derivative elutes in a favorable position (i.e.,<br />

between PTH-Tyr and PTH-Pro) using an Applied Biosystems/Perkin Elmer PTH C-18<br />

column. Either the Applied Biosystems Premix or sodium acetate buffer system can be<br />

used, with a linear gradient extending from 10 to 38% buffer B over 27 min.<br />

References<br />

1. Brown, J. L. and Roberts, W. K. (1976) Evidence that approximately eighty percent of the<br />

soluble proteins from Ehrlich Ascites cells are amino terminally acetylated. J. Biol. Chem.<br />

251, 1009–1014.<br />

2. Driessen, H. P., DeJong, W. W., Tesser, G. I., and Bloemendal, H. (1985) The mechanism<br />

of N-terminal acetylation of proteins in Critical Reviews in Biochemistry vol. 18 (Fasman,<br />

G. D., ed.), CRC, Boca Raton, FL, pp. 281–325.<br />

3. Williams. K. R. and Stone, K. L. (1995) In gel digestion of SDS PAGE-separated protein:<br />

observations from internal sequencing of 25 proteins in Techniques in <strong>Protein</strong> Chemistry<br />

VI (Crabb, J. W., ed.), Academic, San Diego, pp. 143–152.<br />

4. Rosenfeld, J., Capdevielle, J., Guillemot, J., and Ferrara, P. (1992) In gel digestions of<br />

proteins for internal sequence analysis after 1 or 2 dimensional gel electrophoresis. Analyt.<br />

Biochem. 203, 173–179.<br />

5. Fernandez, J., DeMott, M., Atherton, D., and Mische, S. M. (1992) Internal protein<br />

sequence analysis: enzymatic digestion for less than 10 µg of protein bound to polyvinylidene<br />

difluoride or nitrocellulose membranes. Analyt. Biochem. 201, 255–264.<br />

6. Aebersold, R. H., Leavitt, J., Saavedra, R. A., Hood, L. E., and Kent, S. B. (1987) Internal<br />

amino acid sequence analysis of proteins separated by one- or two-dimensional gel electrophoresis<br />

after in situ protease digestion on nitrocellulose. Proc. Natl. Acad. Sci. USA 84,<br />

6970–6974.<br />

7. Stone, K. L., LoPresti, M. B., and Williams, K. R. (1990) Enzymatic digestion of proteins<br />

and HPLC peptide isolation in the subnanomole range in Laboratory Methodology in Biochemistry:<br />

Amino Acid Analysis and <strong>Protein</strong> Sequencing (Fini, C., Floridi, A., Finelli, V.,<br />

and Wittman-Liebold, B., eds.), CRC, Boca Raton, FL, pp. 181–205.<br />

8. Sun, Y., Zhou, Z., and Smith, D. (1989) Location of disulfide bonds in proteins by partial<br />

acid hydrolysis and mass spectrometry in Techniques in <strong>Protein</strong> Chemistry (Hugli, T., ed.),<br />

Academic, San Diego, pp. 176–185.<br />

9. Lombard-Platet, G. and Jalinot, P. (1993) Funnel-well SDS-PAGE: a rapid technique for<br />

obtaining sufficient quantities of low-abundance proteins for internal sequence analysis.<br />

BioTechniques 15, 669–672.

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