10.12.2012 Views

Protein Protocols Protein Protocols

Protein Protocols Protein Protocols

Protein Protocols Protein Protocols

SHOW MORE
SHOW LESS

You also want an ePaper? Increase the reach of your titles

YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.

Kinetic Silver Staining of <strong>Protein</strong>s 53<br />

10 min from the time of mixing reagents A and B; otherwise, excessive silver development<br />

in the reagent may cause a high background.<br />

5. Read optical densities of each well with a microtiter plate reader at 405 nm (see Note 5).<br />

The time elapsed from time zero for each well to reach 0.25 OD (lag time) is noted as the<br />

lag time.<br />

6. The lag time is plotted against the mass per well of adsorbed protein in the standard curve<br />

(step 3), which typically yields an inverse sigmoidal shape curve. Comparison of the lag<br />

times of the sample wells to the standard curve allows the determination of the total mass<br />

of protein in the sample well. The standard curve may be linearized to a sharply biphasic<br />

shape curve by plotting 1/lag time vs 1/protein per well (see Fig. 1).<br />

3.2. Cellulose Assay<br />

1. Mix equal volumes of reagents A and B immediately before use.<br />

2. Stain cellulose (see Note 6) with adsorbed proteins by immersion in the mixed reagents<br />

for at least 1 h.<br />

4. Notes<br />

Table 1<br />

Compounds Known to Interfere with Kinetic<br />

Silver Staining<br />

Compounds Concentration in the<br />

staining reagent<br />

TCA >0.01 mM<br />

Glucose >1 mM<br />

β-Mercaptoethanol >0.1 mM<br />

DTT >0.01 mM<br />

KOH >0.01 mM<br />

EDTA >1 mM<br />

Phosphate >0.01 mM<br />

SDS > 1 mM<br />

Triton X-100 >0.0005%<br />

Ammonium sulfate >1 mM<br />

Urea >1 mM<br />

Imidazole >0.01 mM<br />

Tris >1 mM<br />

NaCl >0.01 mM<br />

KCl >0.01 mM<br />

Guanidine HCl >0.01 mM<br />

1. The wells on the edge of microtiter plates should be avoided for quantitative measurements<br />

because they tend to yield less accurate numbers.<br />

2. Washing of microtiter plates is essential, as residual buffer reagents may interfere with<br />

silver staining (see Table 1). The washing is performed by gently dipping in beakers of<br />

deionized water. Vigorous washing was avoided for fear of losing adsorbed protein.<br />

3. Kinetic silver staining shows little protein-to-protein variation (

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!