marker-assisted selection in wheat - ictsd

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Chapter 9 – Molecular marker-assisted selection for resistance to pathogens in tomato 161Doganlar, S., Dodson, J., Gabor, B., Beck-Bunn, T., Crossman, C. & Tanksley, S.D. 1998 Molecularmapping of the py-1 gene for resistance to corky root rot (Pyranochaeta lycopersici) in tomato.Theor. Appl. Genet. 97: 784–788.Fazio, G., Stevens, M.R., & Scott, J.W. 1999. Identification of RAPD markers linked to fusariumcrown and root rot resistance (Frl) in tomato. Euphytica 105: 205–210.Folkertsma, R.T., Spassova, M.I., Prins, M., Stevens, M.R., Hille, J. & Goldbach, R.W. 1999.Construction of a bacterial artificial chromosome (BAC) library of Lycopersicon esculentum cv.Stevens and its application to physically map the Sw5 locus. Mol. Breed. 5: 197–207.Foolad, M.R. & Sharma, A. 2005. Molecular markers as selection tools in tomato breeding. ActaHort. 695: 225–240.Foolad, M.R., Zhang, L.P., Khan, A.A., Nino-Liu, D. & Lin, G.Y. 2002. Identification of QTLs forearly blight (Alternaria solani) resistance in tomato using backcross populations of a Lycopersiconesculentum x L. hirsutum cross. Theor. Appl. Genet. 104: 945–958.Ganal, M.W., Simon, R., Brommonschenkel, S., Arndt, M., Tanksley, S.D. & Kumar, A. 1995.Genetic mapping of a wide spectrum nematode resistance gene (Hero) against Globodera rostochiensisin tomato. Mol. Plant-Microbe Interact. 8: 886–891.Gardner, R.G. & Shoemaker, P.B. 1999. “Mountain Supreme” early blight-resistant hybrid tomatoand its parents NC EBR-3 and NC EBR-4 tomato breeding lines. Hort. Sci. 34: 745–746.Griffiths, P.D. & Scott, J.W. 2001. Inheritance and linkage of tomato mottle virus resistance genesderived from Lycopersicon chilense accession LA 1932. J. Am. Soc. Hort. Sci. 126: 462–467.Grube, R.C., Radwanski, E.R. & Jahn, M. 2000. Comparative genetics of disease resistance withinthe Solanaceae Genetics 155: 873–887.Hanson, P.M., Bernacchi, D., Green, S., Tanksley, S.D. & Muniy-Appa, V. 2000. Mapping a wildtomato introgression associated with tomato leaf curl virus resistance in a cultivated tomato line. J.Am. Soc. Hort. Sci. 125: 15–20.Huang, C.C., van de Putte, P.M., Haanstra-van der Meer, J.G., Mejer-Dekens, F. & Lindhout, P.2000. Characterization and mapping of resistance to Oidium lycopersicum in two Lycopersiconhirsutum accessions: evidence for close linkage of two Ol-genes on chromosome 6. Heredity 85:511–520.Hulbert, S.H., Webb, C.A., Smith, S.M. & Sun, Q. 2001. Resistance gene complexes: evolution andutilization. Ann. Rev. Phytopathol. 39: 285–312.Jones, D.A., Dickinson, M.J., Balint-Kurt, P.J., Dixon, M.S. & Jones, J.D.G. 1993. Two complexresistance loci revealed in tomato by classical and RFLP mapping of Cf-2, Cf-4, Cf-5, and Cf-9genes for resistance to Cladosporium fulvum. Mol. Plant-Microbe Interact. 6: 348–357.Kabelka, E., Franchino, B. & Francio, D.M. 2002. Two loci from Lycopersicon hirsutum LA407confer resistance to strains of Clavibacter michiganense subsp. michiganensis. Phytopath. 92:504–510.Kawchuck, L.M., Hachey, J. & Lynch, D.R. 1998. Development of sequence characterized DNAmarkers linked to a dominant Verticillium wilt resistance gene in tomato. Genome 41: 91–95.Kawchuk, L.M., Hachey, J., Lynch, D.R., Kulcsar, F., van Rooijen, G., Waterer, D.R., Robertson,A., Kokko, E., Byers, R., Howar, R.J., Fischer, R. & Prufer, D. 2001. Tomato Ve disease resistancegenes encode cell surface-like receptors. Proc. Nat. Acad. Sci. USA 98: 6511–6515.Konieczyn, A. & Ausubel, F.M. 1993. A procedure for mapping Arabidopsis mutations using codominantecotype-specific PCR-based markers. Plant J. 4: 403–410.
162Marker-assisted selection – Current status and future perspectives in crops, livestock, forestry and fishLangella, R., Ercolano, M.R., Monti, L., Frusciante, L. & Barone, A. 2004 Molecular markerassisted transfer of resistance to TSWV in tomato elite lines. J. Hort. Sci. & Biotech. 79: 806–810Laterrot, H. 1996. Breeding strategies for disease resistance in tomatoes with emphasis to the tropics:current status and research challenges, pp.126–132. Proc.1 st Internat. Symp. Trop. Tomato Dis.Recife, Brazil.Lefebvre, V. & Chèvre, A.M. 1995. Tools for marking plant disease and pest resistance genes: a review.Agronomie 15: 3–19.Leister, D., Ballvora, A., Salamini, F. & Gebhardt, C. 1996. PCR-based approach for isolating pathogenresistance genes from potato with potential for wide application in plants. Nature Genet. 14:421–429.Levesque, H., Vedel, F., Mathieu, C. & de Courcel, A.G.L. 1990. Identification of a short rDNAspacer sequence highly specific of a tomato line containing Tm-1 gene introgressed fromLycopersicon hirsutum. Theor. Appl. Genet. 80: 602–608.Martin, G.B., Brommonschenkel, S., Chunwongse, J., Frary, A., Ganal, M.W., Spivey, R., Wu, T.,Earle, E.D. & Tanksley, S.D. 1993. Map-based cloning of a protein kinase gene conferring diseaseresistance in tomato. Science 262: 1432–1436.Michelmore, R.W. 2003. The impact zone: genomics and breeding for durable disease resistance. Curr.Opin. Plant Biol. 6397–6404.Moreau, P., Thoquet, P., Olivier J., Laterrot, H. & Grimsley, N.H. 1998. Genetic mapping of Ph-2, asingle locus controlling partial resistance to Phytophthora infestans in tomato. Mol. Plant-MicrobeInteract. 11: 259–268.Morgante, M. & Salamini, F. 2003. From plant genomics to breeding practice. Curr. Opin. Biotechnol.14: 214–219.Ori, N., Eshed, Y., Paran, I., Prestino, G., Aviv, D., Tanksley, S.D., Zamir, D. & Fluhr, R. 1997. TheI2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-richrepeat superfamily of plant resistance genes. Plant Cell 9: 521–532.Parrella, G., Ruffel, S., Moretti, A., Morel, C., Palloix, A. & Caranta, C. 2002. Recessive resistancegenes against potyviruses are localized in colinear genomic regions of the tomato (Lycopersiconspp.) and pepper (Capsicum spp.) genomes. Theor. Appl. Genet. 105: 855–861.Parrella, G., Moretti, A., Gognalons, P., Lesage, M-L., Marchoux, G., Gebre-Selassie, K. & Carata,C. 2004. The Am gene controlling resistance to alfalfa mosaic virus in tomato is located in the clusterof dominant resistance genes on chromosome 6. Phytopath. 94: 345–350.Peleman, J.D. & van der Voort, J.R. 2003. Breeding by design. Trends Plant Sci. 8: 330–334.Pillen, K., Pineda, O., Lewis, C.B. & Tanksley, S.D. 1996. Status of genome mapping tools in thetaxon Solanaceae. In A. Paterson, ed. Genome mapping in plants, pp. 281–308. Austin, TX, USA,Landes.Rao, A.V. & Agarwal, S. 2000. Role of antioxidant lycopene in cancer and heart disease. J. Am. Coll.Nutr. 19: 563–569.Robert, V.J.M., West, M.A.L., Inai, S., Caines, A., Arntzen, L., Smith, J.K. & St. Clair, D.A. 2001.Marker-assisted introgression of blackmold resistance QTL alleles from wild Lycopersicon cheesmaniito cultivated tomato (L. esculentum) and evaluation of QTL phenotypic effects. Mol. Breed.8: 217–233.Salmeron, J.M., Oldroyd, G.E.D., Rommens, C.M.T., Scofield, S.R., Kim, H.S., Lavello, D.T.,Dahlbeck, D. & Staskawicz, B.J. 1996. Tomato Prf is a member of the leucine-rich repeat class of
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iiiContentsAcknowledgementsForeword
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Section v - marker-assisted selecti
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viiForewordSince almost the beginni
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ixAbbreviations and acronymsAATFAB-
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xiFIVIMSFNPFSCFSILGABIGASGCAGCPGDPG
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xiiiOBMOECDOIEOPVPAGEPBRsPCRPGRFAPI
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xvContributorsAmalia BaroneProfesso
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xviiElcio Perpétuo GuimarãesSenio
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xixAndrea SonninoSenior Agricultura
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Chapter 1Marker-assisted selection
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Chapter 1 - An overview of the issu
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16Marker-assisted selection - Curre
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Chapter 3Molecular markers for use
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Chapter 6Targeted introgression of
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Section VMarker-assisted selectioni
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Chapter 19Technical, economic and p
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This book provides a comprehensive
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