marker-assisted selection in wheat - ictsd

More documents

Recommendations

Info

Chapter 11 – Marker-assisted selection in poultry 197Liu, W. & Lamont, S.J. 2003. Candidate gene approach: Potential association of caspase-1, inhibitorof apoptosis protein-1, and Prosaposin gene polymorphisms with response to Salmonella enteritidischallenge or vaccination in young chicks. Anim. Biotech. 14: 61–76.Liu, H.C., Cheng, H.H., Tirunagaru, V., Sofer, L. & Burnside, J. 2001a. A strategy to identify positionalcandidate genes conferring Marek’s disease resistance by integrating DNA microarrays andgenetic mapping. Anim. Genet. 32: 351–359.Liu, H.C., Kung, H.J., Fulton, J.E., Morgan, R.W. & Cheng. H.H. 2001b. Growth hormone interactswith the Marek’s disease virus SORF2 protein and is associated with disease resistance inchicken. Proc. Natl. Acad. Sci. USA 98: 9203–9208.Liu, H.C., Niikura, M., Fulton, J.E. & Cheng. H.H. 2003. Identification of chicken lymphocyteantigen 6 complex, locus E (LY6E, alias SCA2) as a putative Marek’s disease resistance gene via avirus-host protein interaction screen. Cytogenet. & Genome Res. 102: 304–308.Liu, Y., Jansen, G.B. &. Lin, C.Y. 2002. The covariance between relatives conditional on geneticmarkers. Genet. Select. Evoln. 34: 657–678.McKay, J.C. 1998. A poultry breeder’s approach to avian neoplasia. Avian Pathology 27: S74–S77.Meuwissen, T.H.E., Hayes, B.J. & Goddard, M.E. 2001. Prediction of total genetic value usinggenome-wide dense marker maps. Genetics 157: 1819–1829.Muir, W.M. 2003. Incorporating molecular information in breeding programmes: applications andlimitations. In W.M. Muir & S.E. Aggrey, eds. Poultry Genetics, Breeding and Biotechnology, pp.549–562. Wallingford, UK, CABI Publishing.Nagamine, Y., Haley, C.S., Sewalem, A. & Visscher, P.M. 2003. Quantitative trait loci variation forgrowth and obesity between and within lines of pigs (Sus scrofa). Genetics 164: 629–635.Nagaraja, S.C., Aggrey, S.E., Yao, J., Zadworny, D., Fairfull R.W. & Kuhnlein, U. 2000. Trait associationof a genetic marker near the IGF-I gene in egg-laying chickens. J. Heredity 91: 150–156.Parsanejad, R., Torkamanzehi, A., Zadworny, D. & Kuhnlein, U. 2003. Alleles of cytosolic phosphoenolpyruvatecarboxykinase (PEPCK): trait association and interaction with mitochondrialPEPCK in a strain of white leghorn chickens. Poultry Sci. 82: 1708–1715.Parsanejad, R., Praslickova, D., Zadworny, D. & Kuhnlein, U. 2004. Ornithine decarboxylase: haplotypestructure and trait associations in White Leghorn chickens. Poultry Sci. 83: 1518–1523.Preisinger, R. 2004. Internationale Tendenzen der Tierzüchtung und die Rolle der Zuchtunternehmen.Züchtungskunde 76(6): 395–402.Schmid, M., Nanda, I., Guttenbach, M., Steinlein, C., Hoehn, M., Schartl, M., Haaf, T., Weigend,S., Fries, R., Buerstedde, J.M., Wimmers, K., Burt, D.W., Smith, J., A’Hara, S., Law, A., Griffin,D.K., Bumstead, N., Kaufman, J., Thomson, P.A., Burke, T., Groenen, M.A., Crooijmans, R.P.,Vignal, A., Fillon, V., Morisson, M., Pitel, F.,Tixier-Boichard, M.T., Ladjali-Mohammedi, K.,Hillel, J., Maki-Tanila, A., Cheng, H.H., Delany, M.E., Burnside, J. & Mizuno, S. 2000. Firstreport on chicken genes and chromosomes 2000. Cytogenet. & Cell Genet. 90: 169–218.Schmid, M., Nanda, I., Hoehn, H., Schartl, M., Haaf, T., Buerstedde, J.M., Arakawa, H., Caldwell,R.B., Weigend, S., Burt, D.W., Smith, J., Griffin, D.K., Masabanda, J.S., Groenen, M.A.,Crooijmans, R.P., Vignal, A., Fillon, V., Morisson, M., Pitel, F., Vignoles, M., Garrigues, A.,Gellin, J., Rodionov, A.V., Galkina, S.A., Lukina, N.A., Ben-Ari, G., Blum, S., Hillel, J., Twito,T., Lavi, U., David, L., Feldman, M.W., Delany, M.E., Conley, C.A., Fowler, V.M., Hedges, S.B.,Godbout, R., Katyal, S., Smith, C., Hudson, Q., Sinclair, A. & Mizuno, S. 2005. Second reporton chicken genes and chromosomes 2005. Cytogen.& Genome Res. 109: 415–479.
198Marker-assisted selection – Current status and future perspectives in crops, livestock, forestry and fishShete, S. & Amos, C.I. 2002. Testing for genetic linkage in families by a variance componentsapproach in the presence of genomic imprinting. Am. J. Human Genet. 70: 751–757.Taha, F.A. 2003. The poultry sector in middle income countries and its feed requirements: the case ofEgypt. Outlook Report No. WRS03-02, pp. 3–14. Washington, DC, Economic Research Service,USDA.Vallejo, R.L., Bacon, L.D., Liu, H.C., Witter, R.L., Groenen, M.A., Hillel, J. & Cheng, H.H. 1998.Genetic mapping of quantitative trait loci affecting susceptibility to Marek’s disease virus inducedtumors in F2 intercross chickens. Genetics 148: 349–360.van der Beek, S. &. van Arendonk, J.A.M. 1996. Marker-assisted selection in an outbred poultrynucleus. Anim. Sc. 62: 171–180.Wang, T., Fernando, R.L. & Grossman, M. 1998. Genetic evaluation by best linear unbiased predictionusing marker and trait information in a multibreed population. Genetics 148: 507–515.Wang, J., He, X., Ruan, J., Dai, M., Chen, J., Zhang, Y., Hu, Y., Ye, C., Li, S., Cong, L., Fang, L.,Liu, B., Li, S., Wang, J., Burt, D.W., Wong, G.K., Yu, J., Yang, H. & Wang, J. 2005. ChickVD: asequence variation database for the chicken genome. Nucl. Acid Res. 33: D438–D441.Wong, G.K., Liu, B., Wang, J., Zhang, Y., Yang, X., Zhang, Z., Meng, Q., Zhou, J., Li, D., Zhang,J., Ni, P., Li, S., Ran, L., Li, H., Zhang, J., Li, R., Li, S., Zheng, H., Lin, W., Li, G., Wang, X.,Zhao, W., Li, J., Ye, C., Dai, M., Ruane, J., Zhou, Y., Li, Y., He, X., Zhang, Y., Wang, J., Huang,X., Tong, W., Chen, J., Ye, J., Chen, C., Wei, N., Li, G., Dong, L., Lan, F., Sun, Y., Zhang, Z.,Yang, Z., Yu, Y., Huang, Y., He, D., Xi, Y., Wei, D., Qi, Q., Li, W., Shi, J., Wang, M., Xie, F.,Wang, J., Zhang, X., Wang, P., Zhao, Y., Li, N., Yang, N., Dong, W., Hu, S., Zeng, C., Zheng,W., Hao, B., Hillier, L.W., Yang, S.P., Warren, W.C., Wilson, R.K., Brandstrom, M., Ellegren, H.,Crooijmans, R.P., van der Poel, J.J., Bovenhuis, H., Groenen, M.A., Ovcharenko, I., Gordon,L., Stubbs, L., Lucas, S., Glavina, T., Aerts, A., Kaiser, P., Rothwell, L., Young, J.R., Rogers,S., Walker, B.A., van, H.A., Kaufman, J., Bumstead, N., Lamont, S.J., Zhou, H., Hocking,P.M., Morrice, D., de Koning, D.J., Law, A., Bartley, N., Burt, D.W., Hunt, H., Cheng, H.H.,Gunnarsson, U., Wahlberg, P., Andersson, L., Kindlund, E., Tammi, M.T., Andersson, B.,Webber, C., Ponting, C.P., Overton, I.M., Boardman, P.E., Tang, H., Hubbard, S.J., Wilson,S.A., Yu, J., Wang, J. & Yang, H. 2004. A genetic variation map for chicken with 2.8 million singlenucleotidepolymorphisms. Nature 432: 717–722.Yonash, N., Bacon, L.D. Witter, R.L. & Cheng. H.H. 1999. High resolution mapping and identificationof new quantitative trait loci (QTL) affecting susceptibility to Marek’s disease. Anim. Genet.30: 126–135.Zhou, H., Mitchell, A.D., McMurtry, J.P., Ashwell, C.M. & Lamont, S.J. 2005. Insulin-like growthfactor-1 gene polymorphism associations with growth, body composition, skeleton integrity, andmetabolic traits in chickens. Poult. Sci. 84: 212–219.
Page 4 and 5:
iiiContentsAcknowledgementsForeword
Page 6 and 7:
Section v - marker-assisted selecti
Page 8 and 9:
viiForewordSince almost the beginni
Page 10 and 11:
ixAbbreviations and acronymsAATFAB-
Page 12 and 13:
xiFIVIMSFNPFSCFSILGABIGASGCAGCPGDPG
Page 14 and 15:
xiiiOBMOECDOIEOPVPAGEPBRsPCRPGRFAPI
Page 16 and 17:
xvContributorsAmalia BaroneProfesso
Page 18 and 19:
xviiElcio Perpétuo GuimarãesSenio
Page 20:
xixAndrea SonninoSenior Agricultura
Page 24 and 25:
Chapter 1Marker-assisted selection
Page 26 and 27:
Chapter 1 - An overview of the issu
Page 28 and 29:
Page 30 and 31:
Page 32 and 33:
Page 34:
Page 37 and 38:
16Marker-assisted selection - Curre
Page 39 and 40:
Page 41 and 42:
Page 43 and 44:
Page 45 and 46:
Page 47 and 48:
Page 50 and 51:
Chapter 3Molecular markers for use
Page 52 and 53:
Chapter 3 - Molecular markers for u
Page 54 and 55:
Page 56 and 57:
Page 58 and 59:
Page 60 and 61:
Page 62 and 63:
Page 64 and 65:
Page 66 and 67:
Page 68 and 69:
Page 70:
Page 73 and 74:
Page 75 and 76:
Page 77 and 78:
Page 79 and 80:
Page 81 and 82:
Page 83 and 84:
Page 85 and 86:
Page 88 and 89:
Chapter 6Targeted introgression of
Page 90 and 91:
Chapter 6 - Targeted introgression
Page 92 and 93:
Page 94 and 95:
Page 96 and 97:
Page 98 and 99:
Page 100 and 101:
Page 102 and 103:
Page 104 and 105:
Chapter 7 - Marker-assisted selecti
Page 106 and 107:
Page 108 and 109:
Page 110 and 111:
Page 112 and 113:
Page 114 and 115:
Page 116 and 117:
Page 118 and 119:
Page 120 and 121:
Page 122 and 123:
Page 124 and 125:
Page 126 and 127:
Page 128 and 129:
Page 130 and 131:
Page 132 and 133:
Page 134 and 135:
Page 136:
Page 139 and 140:
118Marker-assisted selection - Curr
Page 141 and 142:
Page 143 and 144:
Page 145 and 146:
Page 147 and 148:
Page 149 and 150:
Page 151 and 152:
Page 153 and 154:
Page 155 and 156:
Page 157 and 158:
Page 159 and 160:
Page 161 and 162:
Page 163 and 164:
Page 165 and 166:
Page 167 and 168: 146Marker-assisted selection - Curr
Page 188 and 189: Chapter 10Strategies, limitations a
Page 190 and 191: Chapter 10 - Strategies, limitation
Page 206 and 207: Chapter 11Marker-assisted selection
Page 208 and 209: Chapter 11 - Marker-assisted select
Page 268:
Chapter 13 - Marker-assisted select
Page 272 and 273:
Page 274 and 275:
Page 276 and 277:
Page 278 and 279:
Page 280 and 281:
Page 282 and 283:
Page 284 and 285:
Page 286 and 287:
Page 288 and 289:
Page 290 and 291:
Page 292 and 293:
Page 294 and 295:
Page 296 and 297:
Page 298 and 299:
Page 300 and 301:
Page 302:
Page 305 and 306:
Page 307 and 308:
Page 309 and 310:
Page 311 and 312:
Page 313 and 314:
Page 315 and 316:
Page 317 and 318:
Page 319 and 320:
Page 321 and 322:
Page 323 and 324:
Page 325 and 326:
Page 328:
Section VMarker-assisted selectioni
Page 331 and 332:
Page 333 and 334:
Page 335 and 336:
Page 337 and 338:
Page 339 and 340:
Page 341 and 342:
Page 343 and 344:
Page 345 and 346:
Page 347 and 348:
Page 349 and 350:
Page 351 and 352:
Page 353 and 354:
Page 355 and 356:
Page 357 and 358:
Page 359 and 360:
Page 361 and 362:
Page 363 and 364:
Page 365 and 366:
Page 367 and 368:
Page 369 and 370:
Page 371 and 372:
Page 373 and 374:
Page 375 and 376:
Page 377 and 378:
Page 379 and 380:
Page 381 and 382:
Page 383 and 384:
Page 386 and 387:
Page 388 and 389:
Page 390 and 391:
Page 392 and 393:
Page 394 and 395:
Page 396 and 397:
Page 398 and 399:
Page 400 and 401:
Page 402 and 403:
Chapter 19Technical, economic and p
Page 404 and 405:
Chapter 19 - Technical, economic an
Page 406 and 407:
Page 408 and 409:
Page 410 and 411:
Page 412 and 413:
Page 414 and 415:
Page 416 and 417:
Page 418 and 419:
Page 420 and 421:
Page 422 and 423:
Page 424 and 425:
Page 426 and 427:
Chapter 20Impacts of intellectual p
Page 428 and 429:
Chapter 20 - Impacts of intellectua
Page 430 and 431:
Page 432 and 433:
Page 434 and 435:
Page 436 and 437:
Page 438 and 439:
Page 440 and 441:
Page 442 and 443:
Page 444 and 445:
Page 446:
Page 449 and 450:
Page 451 and 452:
Page 453 and 454:
Page 455 and 456:
Page 457 and 458:
Page 459 and 460:
Page 461 and 462:
Page 463 and 464:
Page 465 and 466:
Page 467 and 468:
Page 469 and 470:
Page 471 and 472:
Page 473 and 474:
Page 475 and 476:
Page 477 and 478:
Page 479 and 480:
Page 481 and 482:
Page 483 and 484:
Page 485 and 486:
Page 487 and 488:
Page 489 and 490:
Page 491 and 492:
Page 494:
This book provides a comprehensive
show all

marker-assisted selection in wheat - ictsd

Create successful ePaper yourself

Delete template?

Save as template?