Chapter 13 – Marker-<strong>assisted</strong> <strong>selection</strong> <strong>in</strong> sheep and goats 245Dom<strong>in</strong>ik, S. 2005. Quantitative trait loci for <strong>in</strong>ternal nematode resistance <strong>in</strong> sheep: a review. Genet.Sel. Evol. 37 (Suppl. 1): S83–S96.Ferrell, C.L. & Jenk<strong>in</strong>s, T.G. 1984. Energy utilisation by mature, non-pregnant, non-lactat<strong>in</strong>g cowsof different types. J. Anim. Sci.58: 234–243.F<strong>in</strong>occhiaro, R., Portolano, B., Damiani, G., Caroli, A., Budelli, E., Bolla, P. & Pagnacco, G. 2003.The hairless (hr) gene is <strong>in</strong>volved <strong>in</strong> the congenital hypotrichosis of Valle del Belice sheep. Genet.Sel. Evol. 35 (Suppl 1): S147–S156.Forrest, R.H. & Hickford, J.G.H. 2000. Rapid communication: nucleotide sequences of the bov<strong>in</strong>e,capr<strong>in</strong>e and ov<strong>in</strong>e β3-adrenergic receptor genes. J. Anim. Sci. 78: 1397–1398.Frek<strong>in</strong>g, B.A., Murphy, S.K., Wylie, A.A., Rhodes, S.J., Keele, J.W., Leymaster, K.A., Jirtle, R.L.& Smith, T.P. 2002. Identification of the s<strong>in</strong>gle base change caus<strong>in</strong>g the callipyge muscle hypertrophyphenotype, the only known example of polar overdom<strong>in</strong>ance <strong>in</strong> mammals. Genome Res.12: 1496–1506.Galloway, S.M., McNatty, K.P., Cambridge, L.M., Lait<strong>in</strong>en, M.P.E., Juengel, J.L., Jokiranta, T.S.,McLaren, R.J., Luiro, K., Dodds, K.G., Montgomery, G.W., Beattie, A.E., Davis, G.H. & Ritvos,O. 2000. Mutations <strong>in</strong> an oocyte derived growth factor gene (BMP15) causes <strong>in</strong>creased ovulationrate and <strong>in</strong>fertility <strong>in</strong> a dosage sensitive manner. Nature Genet. 25: 279–283.Gootw<strong>in</strong>e, E., Rozov, A., Bor, A. & Richer, S. 2003. Effect of the FecB (Booroola) gene on reproductiveand productive traits <strong>in</strong> the Assaf breed. Proc. Internat. Workshop on Major Genes and QTL <strong>in</strong>Sheep and Goats. 8–11 December 2003. CD-ROM Communication No. . 2-12. Toulouse, France.Grobet, L., Royo Mart<strong>in</strong>, L.J., Poncelet, D., Pirott<strong>in</strong>, D., Brouwers, B., Riquet, J., Schoeberle<strong>in</strong>, A.,Dunner, S., Menissier, F., Massabanda, J., Fries, R., Hanset, R. & Georges, M. 1997. A deletion<strong>in</strong> the myostat<strong>in</strong> gene causes double-muscl<strong>in</strong>g <strong>in</strong> cattle. Nature Genet. 17: 71–74.Hickford, J.G.H., Zhou, H., Slow, S. & Fang, Q. 2004. Diversity of the ov<strong>in</strong>e DQA2 gene. 2004 J.Anim. Sci. 82: 1553–1563.Hoste, C.H. 2002. Research and development challenges for animal breed<strong>in</strong>g <strong>in</strong> develop<strong>in</strong>g countries.Proc. 7th Wrld. Congr. Genetics Appl. Livest. Prodn. 19–23 August 2002. CD-ROMCommunication No. PS-02. Montpellier, France.Johnson, P.L., McEwan, J.C., Dodds, K.G., Purchas, R.W. & Blair, H.T. 2005. A directed search <strong>in</strong>the region of GDF8 for quantitative trait loci affect<strong>in</strong>g carcass traits <strong>in</strong> Texel sheep. J. Anim. Sci.83: 1988–2000.Jopson, N.B., Nicoll, G.B., Stevenson-Barry, J.M., Duncan, S., Greer, G.J., Ba<strong>in</strong>, W.E., Gerard,E.M., Glass, B.C., Broad, T.E. & McEwan, J.C. 2001. Mode of <strong>in</strong>heritance and effects on meatquality of the rib-eye muscl<strong>in</strong>g (REM) QTL <strong>in</strong> sheep. Proc. Assoc. Adv. Anim. Breed. Genet. 14:111–114.Khusro, M., van der Werf, J.H.J., Brown, D. & Ball, A. 2004. Across flock (co)variance componentsfor faecal worm egg count, live weight, and fleece traits for Australian mer<strong>in</strong>os. Livest. Prod. Sci.91: 35–43.Maddox, J.F. 2004. Enhanc<strong>in</strong>g the sheep genome map. Proc. 29th Int. Conf. Anim. Genet. p. 86. 11–16 September 2004. Tokyo, Japan, International Society for Animal Genetics and Japanese Societyof Animal Breed<strong>in</strong>g and Genetics (available at www.isag.org.uk/ISAG/all/ISAG_Tokyo_2004_Proceed<strong>in</strong>gs.pdf).Maddox, J.F. 2005a. Australian Gene Mapp<strong>in</strong>g Web site (http://rubens.its.unimelb.edu.au/~jillm/jill.htm).
246Marker-<strong>assisted</strong> <strong>selection</strong> – Current status and future perspectives <strong>in</strong> crops, livestock, forestry and fishMaddox, J.F. 2005b. A presentation of the differences between the sheep and goat maps. Genet. Sel.Evol. 37 (Suppl. 1): S1–S10.Maddox, J.F., Davies, K.P., Crawford, A.M., Hulme, D.J., Vaiman, D., Cribiu, E.P., Frek<strong>in</strong>g,B.A., Beh, K.J., Cockett, N.E., Kang, N., Riffk<strong>in</strong>, C.D., Dr<strong>in</strong>kwater, R., Moore, S.S., Dodds,K.G., Lumsden, J.M., van Stijn, T.C., Phua, S.H., Adelson, D.L., Burk<strong>in</strong>, H.R., Broom, J.E.,Buitkamp, J., Cambridge, L., Cushwa, W.T., Gerard, E., Galloway, S.M., Harrison, B., Hawken,R.J., Hiendleder, S., Henry, H.M., Medrano, J.F., Paterson, K.A., Phua, S.H., Schibler, L., Stone,R.T. & van Hest, B. 2001. An enhanced l<strong>in</strong>kage map of the sheep genome compris<strong>in</strong>g more than1 000 loci. Genome Res.11: 1 275–1 289.Manfredi, E. 2003. The tale of goat αs1-case<strong>in</strong>. Proc. 3rd Internat. Workshop on Major Genes andQTL <strong>in</strong> Sheep and Goats.CD-ROM Communication No. 2-31. Toulouse, France.McEwan, J.C., Dodds, K.G., Greer, G.J., Ba<strong>in</strong>, W.E., Wright, C.S., Green, R.S. & Watson, T.G.1997. Genotype rank<strong>in</strong>gs for host resistance to <strong>in</strong>ternal parasites for sheep grazed <strong>in</strong> contrast<strong>in</strong>genvironments. Proc. Assoc. Adv. Anim. Breed. Genet. 12: 40–43.McLaren, R.J., Broad, T.E., McEwan, J.C., Jopson, N.B., Robertson, T.R., Glass, B.C., Gerard,E.M., Greer, G.J., Ba<strong>in</strong> W.E. & Nicoll, G.B. 2001. Identification of positional candidates for theCarwell locus for rib-eye muscl<strong>in</strong>g <strong>in</strong> sheep. Proc. Plant and Animal Genome IX, W46. 13–17January 2001. San Diego, CA, USA (available at www.<strong>in</strong>tl-pag.org/9/abstracts/W17_03.html).McLaren, R., Rogers, G., Davies, K., Maddox, J. & Montgomery, G. 1997. L<strong>in</strong>kage mapp<strong>in</strong>g ofwool kerat<strong>in</strong> and kerat<strong>in</strong> associated prote<strong>in</strong> genes <strong>in</strong> sheep. Mamm. Genome 8: 938–940.McRae, A.F., Bishop, S.C., Wall<strong>in</strong>g, G.A., Wilson, A.D. & Visscher, P.M. 2005. Mapp<strong>in</strong>g of multiplequantitative trait loci for growth and carcass traits <strong>in</strong> a complex commercial sheep pedigree. Anim.Sci. 80: 135–141.Meszaros, S.A., Henshall, J.M., Burgess, S.K., Gray, G.D. & Tier, B. 1999. Detection of a quantitativetrait locus associated with a reduction of faecal egg count <strong>in</strong> Mer<strong>in</strong>o sheep. Proc. Assoc. Adv.Anim. Breed. Genet. 13: 211–218.Montaldo, H.H. & Manfredi, E. 2002. Organization of <strong>selection</strong> programs for dairy goats. Proc. 7thWrld. Cong. Genet. Appl. Livest. Prodn. Communication No. 01-35. Montpellier, France.Montgomery, G.W., Henry, H.M., Dodds, K.G., Beattie, A.E., Wuliji, T. & Crawford, A.M. 1996.Mapp<strong>in</strong>g the Horns (Ho) locus <strong>in</strong> sheep: a further locus controll<strong>in</strong>g horn development <strong>in</strong> domesticanimals. J. Hered. 87: 358–63.Moreno, C.R., Lantier, I., Lantier, F., Andreoletti, O., Vaiman, D., Sarrad<strong>in</strong>, P., Echeynne, F.,Cribiu, E.P., Cosseddu, G. & Elsen, J-M. 2002. Proc. 7th Wrld. Cong. Genet. Appl. Livest. Prodn.CD-ROM Communication No. 13-21. Montpellier, France.Moreno, C.R., Lantier, F., Lantier, I., Sarrad<strong>in</strong>, P. & Elsen, J-M. 2003. Detection of new quantitativetrait loci for susceptibility to transmissible spongiform encephalopathies <strong>in</strong> mice. Genetics 165:2085–2091.Mulsant, P., Lecerf,, F., Fabre, S., Schibler, L., Monget, P., Lanneluc, I., Pisselet, C., Riquet, J.,Monniaux, D., Callebaut, I., Cribiu, E., Thimonier, J., Teyssier, J., Bod<strong>in</strong>, L., Cognie, Y., Chitour,N. & Elsen, J.M. 2001. Mutation <strong>in</strong> bone morphogenetic prote<strong>in</strong> receptor-1B is associated with<strong>in</strong>creased ovulation rate <strong>in</strong> Booroola Mer<strong>in</strong>o ewes. Proc. Nat. Acad. Sci. USA 98: 5104–5109.Nimbkar, C., Pardeshi, V. & Ghalsasi, P. 2005. Evaluation of the utility of the FecB gene to improvethe productivity of Deccani sheep <strong>in</strong> Maharashtra, India. In H.P.S, Makkar & G.J. Viljoen, eds.
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iiiContentsAcknowledgementsForeword
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Section v - marker-assisted selecti
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viiForewordSince almost the beginni
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ixAbbreviations and acronymsAATFAB-
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xiFIVIMSFNPFSCFSILGABIGASGCAGCPGDPG
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xiiiOBMOECDOIEOPVPAGEPBRsPCRPGRFAPI
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xvContributorsAmalia BaroneProfesso
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xviiElcio Perpétuo GuimarãesSenio
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xixAndrea SonninoSenior Agricultura
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Chapter 1Marker-assisted selection
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Chapter 1 - An overview of the issu
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Chapter 3Molecular markers for use
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Chapter 19Technical, economic and p
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This book provides a comprehensive