marker-assisted selection in wheat - ictsd

Chapter 15 – Marker-assisted selection in forestry species 289Table 2Quantitative trait loci reported for forest tree speciesSpecies Markers 1 QTL ReferenceAcacia mangium RFLP, SSR Disease resistance Butcher, 2004Cryptomeria japonica Isozyme, RAPD, RFLP Juvenile growth, flowering,vegetative propagationYoshimaru et al., 1998RAPD Wood quality Kuramoto et al., 2000Eucalyptus globulus Isozyme, RFLP, SSR Wood density, pulp yield,microfibril angleThamarus et al., 2004Eucalyptus grandis RAPD Growth, wood density Grattapaglia et al., 1996;RAPD Disease resistance Junghaus et al., 2003E.grandis x E. urophylla RAPD Vegetative propagation Grattapaglia, Bertolucci andSederoff, 1995; Marques et al.,1999RAPD Growth, wood density Verhaegen et al., 1997RAPD Leaf oil composition Shepherd, Chaparro and Teasdale,1999Eucalyptus nitens RFLP Growth Byrne et al., 1997aEucalyptus tereticornisx E. globulusRFLP Frost tolerance Byrne et al., 1997bAFLP Vegetative propagation Marques et al., 2002Fagus sylvatica AFLP, RAPD, SSR Leaf traits, growth Scalfi et al., 2004Hevea braziliensis x AFLP, isozyme, RFLP, Disease resistance Lespinasse et al., 2000H. benthamiana SSRPinus palustris x RAPD Juvenile growth Weng et al., 2002P. elliottiiPinus pinaster RAPD Bud set, frost tolerance Hurme et al., 2000AFLP Growth, water use efficiency Brendel et al., 2002Pinus radiata RAPD Growth Emebiri et al., 1997,1998a,bAFLP, RAPD, SSR Wood density Kumar et al., 2000RFLP, SSRGrowth, wood density, disease Devey et al., 2004a,bresistancePinus sylvestris AFLP Growth, cold acclimation Lerceteau, Plomion andAndersson, 2000; Yazdani et al.,2003Pinus taeda Isozymes, RAPD, RFLP Growth Kaya, Sewell and Neale, 1999RFLP Physical wood properties Groover et al., 1994; Sewell etal., 2000RFLP Chemical wood properties Sewell et al., 2002ESTP, RFLP Wood properties Brown et al., 2003PopulusAFLP, ISSR, RAPD, RFLP,SCAR, SSR, STSGrowth, form, leafarchitecture, leaf & budphenology, disease resistance,wood qualitySee review in Cervera et al., 2004Pseudotsuga menziesii RAPD, RFLP Vegetative bud flush Jermstadt et al., 2001aRAPD, RFLP Cold hardiness Jermstadt et al., 2001bRAPD, RFLP QTL x environment Jermstadt et al., 2003Quercus robur AFLP, RAPD, SCAR, SSR Growth, bud burst Saintagne et al., 2004Salix dasyclados xS. viminalisAFLPGrowth, drought tolerance,bud flushTsarouhas, Gullberg andLagercrantz, 2002, 2003;Rönnberg-Wästljung, Glynn andWeih, 20051AFLP = amplified fragment length polymorphism; ESTP = expressed sequence tagged polymorphism; ISSR = inter-simplesequence repeats; RAPD = random amplified polymorphic DNA; RFLP = restriction fragment length polymorphism; SCAR =sequence characterized amplified regions; SSR = simple sequence repeat (microsatellite); STS = sequence-tagged sites