marker-assisted selection in wheat - ictsd

Chapter 3 – Molecular markers for use in plant molecular breeding and germplasm evaluation 47Ronald, P.C., Salmeron, J.M., Carland, F.M. & Staskawicz, B.J. 1992. The cloned avirulence geneavrPto induces disease resistance in tomato cultivars containing the Pto resistance gene. J. Bacteriol.174: 1604–1611.Rungus, D., Berube, Y., Zhang, J., Ralph, S., Ritland, C.E., Ellis, B.E., Douglas, C., Bohlmann, J.& Ritland, K. 2004. Robust simple sequence repeat markers for spruce (Picea spp.) from expressedsequence tags. Theor. Appl. Genet. 109: 1283–1294.Septiningsih, E.M., Prasetiyono, J., Lubis, E., Tai, T.H., Tjubaryat, T., Moeljopawiro, S. &McCouch, S.R. 2003a. Identification of quantitative trait loci for yield and yield components inan advanced backcross population derived from the Oryza sativa variety IR64 and the wild relativeO. rufipogon. Theor. Appl. Genet. 107: 1419–1432.Septiningsih, E.M., Trijatmiko, K.R., Moeljopawiro, S. & McCouch, S.R. 2003b. Identification ofquantitative trait loci for grain quality in an advanced backcross population derived from the Oryzasativa variety IR64 and the wild relative O. rufipogon. Theor. Appl. Genet. 107: 1433–1441.Song, W.Y., Wang, G.L., Chen, L.L., Kim, H.S., Pi, L.Y., Holsten, T., Gardner, J., Wang, B., Zhai,W.X., Zhu, L.H., Fauquet, C. & Ronald, P. 1995. A receptor kinase-like protein encoded by therice disease resistance gene, Xa21. Science 270: 1804–1806.Southern, E.M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis.J. Mol. Biol. 98: 503–510.Su, C.C., Cheng, X.N., Zhai, H.Q. & Wan, J.M. 2002. Detection and analysis of QTL for resistanceto the brown planthopper, Nilaparvata lugens (Stal), in rice (Oryza sativa L.), using backcrossinbred lines]. Yi Chuan Xue Bao 29: 332–338.Sun, X., Cao, Y., Yang, Z., Xu, C., Li, X., Wang, S. & Zhang, Q. 2004. Xa26, a gene conferringresistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein.Plant J. 37: 517–527Takeuchi, Y., Lin, S.Y., Sasaki, T. & Yano, M. 2003. Fine linkage mapping enables dissection ofclosely linked quantitative trait loci for seed dormancy and heading in rice. Theor. Appl. Genet.107: 1174–1180.Tanksley, S.D. & McCouch, S.R. 1997. Seed banks and molecular maps: unlocking genetic potentialfrom the wild. Science 277: 1063–1066.Taylor, G., 2002. Populus: arabidopsis for forestry. Do we need a model tree? Ann. Bot. (London) 90:681–689.Temnykh, S.P., Park, W.D., Ayres, N., Cartinhour, S., Hauck, N., Lipovich, L., Cho,Y-G., Ishii,T. & McCouch, S.R. 2000. Mapping and genome organization of microsatellite sequences in rice(Oryza sativa L.). Theor. Appl. Genet. 100: 697–712.Temnykh, S., DeClerck, G., Lukashova, A., Lipovich, L., Cartinhour, S. & McCouch, S. 2001.Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency,length variation, transposon associations, and genetic marker potential. Genome Res. 11:1441–1452.Testolin, R., Huang, W.G., Lain, O., Messina, R., Vecchione, A. & Cipriani, G. 2001. A kiwifruit(Actinidia spp.) linkage map based on microsatellites and integrated with AFLP markers. Theor.Appl. Genet. 103: 30–36.Thomson M., Septiningsih E. and Sutrisno. 2003. Workshop on IPR in relation to Plant Breeding,Cipanas, Indonesia, 10–18 November.Thomson, M.J., Tai, T.H., McClung, A.M., Lai, X.H., Hinga, M.E., Lobos, K.B., Xu, Y., Martinez,C.P. & McCouch, S.R. 2003. Mapping quantitative trait loci for yield, yield components and