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Growth, Differentiation and Sexuality

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Fig. 20.2. Meiotic recombination. Shown are two homologous<br />

DNA duplexes (of the four involved in the process),<br />

one in gray<strong>and</strong> one in black.Meioticrecombination initiates<br />

with a double-str<strong>and</strong> break (DSB)inoneduplex.Processing<br />

of the ends results in single-str<strong>and</strong>ed tails (SEI).Asinglestr<strong>and</strong>ed<br />

tail then invades the homologous duplex. Repair<br />

synthesis (dotted lines)resultsinadoubleHollidayjunction<br />

(DHJ) that can be resolved to generate either crossing-over<br />

(right) or noncrossover (left) products. Crossovers will result<br />

as 4 : 4 asci (four wild-type spores, black, <strong>and</strong> four mutant<br />

ascospores, white) whereas noncrossovers will result<br />

in 2 : 6 (or 6 : 2) asci in S. macrospora heterozygous crosses<br />

(shown above the corresponding drawings)<br />

the aberrant segregation occurred at the pyridoxin<br />

mutant site, <strong>and</strong> not as a consequence of aberrant<br />

chromosome segregation.<br />

However, most progress in our underst<strong>and</strong>ing<br />

of the conversion of DSBs into CO <strong>and</strong> NCO has<br />

been associated with the development of physical<br />

assays of recombination in completely synchronous<br />

budding yeast meiocytes (e.g., Padmore<br />

et al. 1991; Schwacha <strong>and</strong> Kleckner 1995; Hunter<br />

<strong>and</strong> Kleckner 2001). These approaches have defined<br />

several key events occurring from leptotene<br />

to diplotene. DSB formation is followed by the sequential<br />

appearance of two stable str<strong>and</strong> exchange<br />

intermediates (Fig. 20.2). One str<strong>and</strong> at one end of<br />

theDSBundergoesstableexchangewithonestr<strong>and</strong><br />

of the homologous DNA duplex to give a singleend<br />

invasion intermediate (SEI), which will be converted<br />

to double Holliday junction (DHJ; Fig. 20.2).<br />

DHJs will in turn be converted into CO products<br />

at late pachytene (Schwacha <strong>and</strong> Kleckner 1995;<br />

Allers <strong>and</strong> Lichten 2001; Hunter <strong>and</strong> Kleckner 2001;<br />

Börner et al. 2004).<br />

In budding yeast, DHJs were shown to be precursors<br />

specifically of COs, eliminating the hypothesis<br />

that the CO/NCO differentiation is made by alternate<br />

resolution of Holliday junctions (Allers <strong>and</strong><br />

Lichten 2001). Also, the CO versus NCO decision is<br />

Fungal Meiosis 421<br />

made prior to, or concomitant with formation of<br />

SEIs (Börner et al. 2004). Allers <strong>and</strong> Lichten (2001)<br />

<strong>and</strong> Börner et al. (2004) proposed therefore that<br />

CO/NCO control might be imposed as soon as DSBs<br />

are engagedinnascentinteractions with the homologous<br />

DNA duplex region of their homologue partner<br />

(Fig. 20.2, <strong>and</strong> detailed drawings in Bishop <strong>and</strong><br />

Zickler 2004). Moreover, recent studies of the endonuclease<br />

Mus81 indicate that, in addition to DHJ<br />

resolution, some COs may be formed by the processing<br />

of non-DHJ intermediates. Interestingly,<br />

these latter COs do not show interference (review<br />

in Hollingsworth <strong>and</strong> Brill 2004). The MUS81 pathway<br />

accounts for a relatively minor fraction of COs<br />

in budding yeast, <strong>and</strong> likely in both S. macrospora<br />

<strong>and</strong> N. crassa, accordingtothepresenceofMSH4<br />

<strong>and</strong> MSH5, encoding meiosis-specific MutS homologues<br />

required to promote COs. By contrast, the<br />

MUS81 pathway is responsible for most, if not all,<br />

of the COs in fission yeast <strong>and</strong> C. elegans (review<br />

in Hollingsworth <strong>and</strong> Brill 2004). Thus, the decision<br />

of which CO pathway to use appears to vary<br />

between organisms.<br />

The considerable recent progress made in elucidating<br />

the meiotic recombination process is the<br />

extension of an almost 80-year-long development<br />

of studies on recombination, in which mycelial<br />

fungi played a central <strong>and</strong> often pioneering role.<br />

Detailed analyses of CO <strong>and</strong> NCO events, together<br />

with stimulating models, allowed the discovery of<br />

key steps of the process (for excellent reviews, see<br />

Esser <strong>and</strong> Kuenen 1967; Catcheside 1977; Whitehouse<br />

1982; Rossignol et al. 1988; Nicolas <strong>and</strong> Petes<br />

1994).<br />

C. Meiotic Exchanges Are Highly Regulated<br />

An additional, prominent feature of meiotic recombination<br />

is the tight regulation of both the number<br />

<strong>and</strong> distribution of exchanges along <strong>and</strong> among<br />

chromosomes. Although a large number of recombinational<br />

interactions are initiated, only a selected<br />

subset is designated for maturation into COs, the<br />

remaining interactions maturing primarily or exclusively<br />

into inter-homologue NCOs. In the absence<br />

of any regulation, COs <strong>and</strong> their cytological<br />

counterparts, chiasmata <strong>and</strong> recombination nodules<br />

(RNs; see Sect. V.), should be r<strong>and</strong>omly distributed<br />

among <strong>and</strong> along chromosomes. Analysis<br />

of their distribution in several organisms shows<br />

clearly that their distribution is non-r<strong>and</strong>om, as<br />

reflected by three main features.

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