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Applied Biosystems SOLiD™ 4 System SETS Software User Guide ...

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C<br />

Saving data<br />

<strong>Applied</strong> <strong>Biosystems</strong> SOLiD 4 <strong>System</strong> <strong>SETS</strong> <strong>Software</strong> <strong>User</strong> <strong>Guide</strong><br />

Appendix C<br />

Advanced Topic: Data<br />

Management<br />

The topics provided in this appendix are intended for advanced users<br />

of the SOLiD 4 <strong>System</strong> and do not apply to the typical user.<br />

This appendix describes data storage for the following:<br />

All data<br />

Raw image data<br />

Primary analysis results data<br />

Approximate storage space for all data<br />

The following table shows the size of all data for archival and storage<br />

consideration. The following is estimated file sizes.<br />

Table 1 Total Data size for archival and storage consideration<br />

50 nt tag/ 300k/panel,<br />

2357 panels<br />

Image data size ‡<br />

Primary analysis<br />

results size in “.spch”<br />

format<br />

Primary Analysis Data<br />

size (flatfile:<br />

“.csfasta”, “_QV.qual”,<br />

“.stats”)<br />

1 slide -1 tag 1.84 TB 646 GB 170 GB<br />

1 slide - 2 tags 3.6 TB 1.29 TB 340 GB<br />

2 slides - 1 tag 3.6 TB 1.29TB 340 GB<br />

2 slides - 2 tags 7.2 TB 2.58 TB 680 GB<br />

‡ Image data is not needed after analysis is complete.<br />

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