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Applied Biosystems SOLiD™ 4 System SETS Software User Guide ...

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Define secondary<br />

analysis settings<br />

<strong>Applied</strong> <strong>Biosystems</strong> SOLiD 4 <strong>System</strong> <strong>SETS</strong> <strong>Software</strong> <strong>User</strong> <strong>Guide</strong><br />

Chapter 2 Prepare Run Settings<br />

Set analysis parameters 2<br />

In <strong>SETS</strong>, you can define the secondary analysis pipelines and<br />

parameters as a part of your setup for secondary analysis.<br />

To modify any secondary analysis pipeline or parameter:<br />

1. Log into <strong>SETS</strong>.<br />

2. Go to Main Menu<br />

�Analysis�Secondary<br />

Analysis Settings.<br />

3. Select the Application type<br />

(SingleTag or IQ, as<br />

shown) to create a secondary settings.<br />

4. Click [New...] to begin modifying the threshold settings for your<br />

application.<br />

Note: Click to delete an existing setting<br />

or to edit one.<br />

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