Applied Biosystems SOLiD™ 4 System SETS Software User Guide ...

D
Appendix D Advanced Topic: Primary Analysis
Procedures to verify primary analysis status
The above example shows detailed information for one
Filter_FastaF3 run. This run uses 5 primers (PA-PE) and for
each primer, 5 cycles. This analysis used all 5 primers (PA-P5);
for each primer, 5 cycles were included in the analysis job,
indicating no missing images in the analysis.
Sometimes, an analysis job might be reported as successful (no
red x or warning dot next to the analysis name), but some of the
primer/cycle combinations were not included in the analysis.
Even if the analysis job is successful, if it is incomplete, it
should be treated as a failed analysis job.
188 Applied Biosystems SOLiD 4 System SETS Software User Guide