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NASA Scientific and Technical Aerospace Reports

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Scheduling (TIES) for efficient network execution, providing an Automatic Parallelization platform with performance<br />

scalability for the NOW.<br />

DTIC<br />

Parallel Processing (Computers); Optimization<br />

20060002491 Ohio State Univ., Columbus, OH USA<br />

The Virtual Microscope<br />

Catalyurek, Umit; Beynon, Michael D.; Chang, Chialin; Kurc, Tahsin; Sussman, Alan; Saltz, Joel; Jan. 1, 2005; 18 pp.; In<br />

English; Original contains color illustrations<br />

Contract(s)/Grant(s): N66001-97-C-8534<br />

Report No.(s): AD-A440466; No Copyright; Avail.: CASI: A03, Hardcopy<br />

We present the design <strong>and</strong> implementation of the Virtual Microscope, a software system employing a client/server<br />

architecture to provide a realistic emulation of a high power light microscope. The system provides a form of completely<br />

digital telepathology, allowing simultaneous access to archived digital slide images by multiple clients. The main problem the<br />

system targets is storing <strong>and</strong> processing the extremely large quantities of data required to represent a collection of slides. The<br />

Virtual Microscope client software runs on the end user’s PC or workstation, while database software for storing, retrieving<br />

<strong>and</strong> processing the microscope image data runs on a parallel computer or on a set of workstations at one or more potentially<br />

remote sites. We have designed <strong>and</strong> implemented two versions of the data server software. One implementation is a<br />

customization of a database system framework that is optimized for a tightly coupled parallel machine with attached local<br />

disks. The second implementation is component-based, <strong>and</strong> has been designed to accommodate access to <strong>and</strong> processing of<br />

data in a distributed, heterogeneous environment. We also have developed caching client software, implemented in Java, to<br />

achieve good response time <strong>and</strong> portability across different computer platforms. The performance results presented show that<br />

the Virtual Microscope systems scales well, so that many clients can be adequately serviced by an appropriately configured<br />

data server.<br />

DTIC<br />

Microscopes; Computer Programs<br />

20060002502 Karlova Univ., Prague, Czechoslovakia<br />

From Art to Industry: Development of Biomedical Simulators<br />

Kofranek, Jiri; Andrlik, Michal; Petr, Tomas; Petr, Stodulka; The IPSI BgD Transactions on Advanced Research. Multi-, Inter-,<br />

<strong>and</strong> Trans-disciplinary Issues in Computer Science <strong>and</strong> Engineering, Volume 1, Number 2; July 2005, pp. 62-67; In English;<br />

See also 20060002498; Original contains black <strong>and</strong> white illustrations<br />

Contract(s)/Grant(s): MOE-1111D0008; Copyright; Avail.: CASI: A02, Hardcopy<br />

The authors’ methodology of creating e-learning content for the students of physiology, pathophysiology <strong>and</strong> biomedicine<br />

at the Faculty of Medicine is presented here. The design process from a formalized description of physiological reality to<br />

interactive educational software is described. Various tools an, used during the design - starting with the numerical simulation<br />

software Matlab/Simulink, through Macromedia Flash for interactive animations, Control Web or MS Visual Studio for user<br />

interface design to web publishing tools including the Macromedia Breeze learning management system. Also, various<br />

professions are involved - teachers, physicians, simulation/modeling experts, graphic designers <strong>and</strong> programmers. The aim is<br />

to provide students with software that helps them underst<strong>and</strong> the complex dynamics of physiological systems.<br />

Author<br />

Biomedical Data; Education; Computerized Simulation; Management Systems; Interactive Control; Physiology; Complex<br />

Systems<br />

20060002510 Atmajaya Univ., Jakarta, Indonesia<br />

Performance of a Parallel Technique for Solving Stiff ODEs Using a Block-diagonal Implicit Runge-Kutta Method<br />

Kartawidjaya, M. A.; Suhartanto, H.; Basaruddin, T.; The IPSI BgD Transactions on Advanced Research. Multi-, Inter-, <strong>and</strong><br />

Trans-disciplinary Issues in Computer Science <strong>and</strong> Engineering, Volume 1, Number 2; July 2005, pp. 68-73; In English; See<br />

also 20060002498; Copyright; Avail.: CASI: A02, Hardcopy<br />

Differential equations arise in many fields of application, such as in the simulation of phenomena in chemistry, physics,<br />

biology, medicine <strong>and</strong> so forth. These equations are generally in the form of initial value problems (IVPs), which can be<br />

extremely costly to solve when they are stiff due to the requirement of working with implicit methods. Implicit methods are<br />

costly because at each time step we need to solve implicit equations, which are nonlinear in general. Therefore, in such cases<br />

142

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