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UC Davis General Catalog, 2006-2008 - General Catalog - UC Davis

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Exercise Biology 271<br />

194HA-194HB-194HC. Research Honors<br />

Laboratory—6 hours. Prerequisite: Students who<br />

have completed 135 units and qualify for the honors<br />

program (as defined by the current catalog). Students<br />

pursue intensive research under the guidance<br />

of a faculty adviser. Students are expected to complete<br />

the full three-quarter sequence culminating in<br />

the writing of an honors thesis. (Deferred grading<br />

only, pending completion of sequence.)<br />

197T. Tutoring in Biological Sciences 1B (1-<br />

2)<br />

Tutorial—3-6 hours. Prerequisite: Biological Sciences<br />

1B with a grade of B or better. Assisting the instructor<br />

by tutoring students in Biological Sciences 1B laboratory.<br />

Tutoring is voluntary and is supervised by a<br />

Laboratory Teaching Assistant and the Laboratory<br />

Coordinator. May be repeated three times for credit.<br />

(P/NP grading only.)—I, II, III. (I, II, III.)<br />

198. Directed Group Study (1-5)<br />

(P/NP grading only.)<br />

199. Special Study for Advanced<br />

Undergraduates (1-5)<br />

(P/NP grading only.)<br />

Graduate Courses<br />

210. Molecular Phylogenetic Analysis (3)<br />

Lecture—2 hours; laboratory—3 hours. Theory and<br />

practice of inferring phylogenetic trees using molecular<br />

sequence data. Practical techniques for obtaining<br />

sequence data, advantages and disadvantages of<br />

common approaches for inferring trees, statistical<br />

methods for comparing alternative hypotheses.<br />

(Same course as Nematology 210.) Offered in alternate<br />

years.—(III.) Nadler<br />

211. Applied Phylogenetics (3)<br />

Lecture—2 hours; laboratory—3 hours. Prerequisite:<br />

course 103 or 210 or Population Biology 200C or<br />

the equivalent, graduate standing. Applications of<br />

phylogenetic methods to fields outside of systematics.<br />

Core lectures/labs in remedial phylogenetics,<br />

phylogeography, conservation and comparative<br />

morphology. Special topics vary yearly. May be<br />

repeated once for credit.—III. (III.) Shaffer,<br />

Wainwright<br />

220. Species and Speciation (3)<br />

Lecture—2 hours; discussion—1 hour. Prerequisite:<br />

course 100, Philosophy 108 or the equivalent; History<br />

and Philosophy of Science 130B recommended.<br />

Current status of species concepts, models of speciation,<br />

current research on speciation, and relevance<br />

of species to conservation biology. Offered in alternate<br />

years.—II. Shapiro<br />

231. Principles of Biological Data Analysis<br />

(3)<br />

Lecture—2 hours; laboratory—3 hours. Introduction<br />

to the principles of data analysis, experimental<br />

design, statistical modeling, inference, and hypothesis<br />

tests. Statistical methods of particular importance<br />

in biological applications will be emphasized. Examples<br />

will be presented from the fields of ecology and<br />

evolutionary genetics. (S/U grading only.)—II. (II.)<br />

Rannala<br />

240. Paleobotany and Angiosperm<br />

Evolution (4)<br />

Lecture—3 hours; laboratory—3 hours. Prerequisite:<br />

Plant Biology 108, 116, or course 140. Critical<br />

analysis of the plant fossil record as a source of evidence<br />

on origin, evolution, and phylogeny of the<br />

angio-sperms, Cretaceous and Tertiary climates,<br />

geographic history of modern taxa, and origin of<br />

modern vegetation types. Offered in alternate<br />

years.—(II.) Doyle<br />

290C. Research Conference (1)<br />

Discussion—1 hour. Prerequisite: graduate standing<br />

and consent of instructor. Presentation and discussion<br />

of faculty and graduate student research in biology.<br />

May be repeated for credit. (S/U grading<br />

only.)—I, II, III. (I, II, III.)<br />

298. Group Study (1-5)<br />

(S/U grading only.)<br />

299. Research (1-12)<br />

(S/U grading only.)<br />

Professional Course<br />

390. Methods of Teaching (2)<br />

Lecture—1 hour; discussion—1 hour. Prerequisite:<br />

graduate standing and consent of instructor. Practical<br />

experience in the methods and problems of<br />

teaching. Includes analyses of texts and supporting<br />

material, discussion of teaching techniques and preparing<br />

and conducting of laboratory and discussion<br />

sections. May be repeated for credit for a maximum<br />

of 8 units. (S/U grading only.)—I, II, III. (I, II, III.)<br />

Exercise Biology<br />

See Neurobiology, Physiology, and<br />

Behavior, on page 392.<br />

Exercise Science<br />

(A Graduate Group)<br />

Dave Hawkins, Ph.D., Chairperson of the Group<br />

Group Office. 310 Life Sciences Addition<br />

(530) 752-2981; http://www.dbs.ucdavis.edu/<br />

grad/exs_sci_gg/default.html<br />

Faculty<br />

Sue Bodine, Ph.D., Professor<br />

(Neurobiology, Physiology & Behavior)<br />

George Brooks, Ph.D., Professor<br />

(Integrative Biology-<strong>UC</strong> Berkeley)<br />

Gretchen Casazza, Ph.D., Research Director<br />

(Sports Medicine)<br />

Chao-Yin Chen, Ph.D., Adj Professor<br />

(Med: Biochemistry and Molecular Medicine)<br />

Youngran Chung, Ph.D., Assistant Research Biochemist<br />

(Med: Pharm & Tox)<br />

Fadi Fathallah, Ph.D., Associate Professor<br />

(Biological and Agricultural Engineering)<br />

Charles A. Fuller, Ph.D., Professor<br />

(Neurobiology, Physiology, and Behavior)<br />

Dave Hawkins, Ph.D., Professor<br />

(Neurobiology, Physiology & Behavior)<br />

Robert G. Holly, Ph.D., Senior Lecturer<br />

(Neurobiology, Physiology & Behavior)<br />

James H. Jones, Ph.D., Professor<br />

(Surgical and Radiological Sciences)<br />

Thomas Jue, Ph.D., Professor<br />

(Med: Biochemistry and Molecular Medicine)<br />

Marc Kaufman, Ph.D., Professor (Internal Medicine)<br />

Ulrike Kreutzer, Ph.D., Assistant Adjunct Professor<br />

(Med: Biochemistry and Molecular Medicine)<br />

Marta Van Loan, Ph.D., Associate Adjunct Professor<br />

(Nutrition)<br />

Craig M. McDonald, Ph.D., Associate Professor<br />

(Physical Medicine and Rehabilitation)<br />

Edward S. Schelegle, Ph.D., Assistant Professor<br />

(Anatomy, Molecular, Cellular, and Integrative<br />

Physiology)<br />

Espen Spangenburg, Ph.D., Assistant Professor<br />

(Neurobiology, Physiology & Behavior)<br />

Charles Stebbins, Ph.D., Professor<br />

(Internal Medicine)<br />

Susan M. Stover, Ph.D., Professor<br />

(Anatomy, Physiology and Cell Biology)<br />

Keith R. Williams, Ph.D., Associate Professor<br />

(Neurobiology, Physiology & Behavior)<br />

Graduate Study. The Graduate Group in Exercise<br />

Science offers a program of study and research<br />

leading to an M.S. degree. Advanced training is<br />

provided in two areas of emphasis. The Exercise<br />

Physiology Area involves the study of functional, metabolic,<br />

nutritional, and regulatory aspects of the cardiovascular,<br />

respiratory, and skeletal muscle systems<br />

as they relate to movement and exercise. The Biomechanics<br />

Area includes the study of skeletal muscle<br />

mechanics, motor control, biomechanical analysis of<br />

human movement, tissue mechanics, motor control,<br />

and clinical biomechanics.<br />

Graduate Advisers. M. Kaufman, C. Stebbins,<br />

K. Williams<br />

Courses in Exercise Science (EXS)<br />

Graduate Courses<br />

200. Introduction to Research in Exercise<br />

Science (3)<br />

Discussion—2 hours; seminar—1 hour. Prerequisite:<br />

graduate standing in Exercise Science or consent of<br />

instructor. Principles of scientific research in Exercise<br />

Science: scientific method, literature review, experimental<br />

design, hypotheses formulation, data collection,<br />

analysis, inferences, biases, human subject and<br />

animal protocols, ethics.—I. Jue<br />

201. Exercise Cardiorespiratory Physiology<br />

(3)<br />

Lecture/discussion—3 hours. Prerequisite: undergraduate<br />

course in systemic physiology, exercise<br />

physiology, and biochemistry (intermediary metabolism).<br />

Advanced course on integrated responses of<br />

the cardiovascular and respiratory systems to exercise.<br />

Includes hemodynamic, neurohormonal, and<br />

autonomic aspects of cardiac and vascular function,<br />

principles of myocardial metabolism, and mechanisms<br />

underlying changes in pulmonary function and<br />

gas transport.—I. Stebbins<br />

206. Exercise Metabolism (3)<br />

Lecture/discussion—3 hour. Prerequisite: undergraduate<br />

course in metabolism (Biological Sciences 103,<br />

Nutrition 101) or consent of instructor. The integrated<br />

metabolic response to exercise. Includes<br />

bioenergetics and metabolic regulation of skeletal<br />

muscle, and role of cardiovascular, respiratory,<br />

hemodynamic, and neurohormonal control.—III. Jue<br />

210. Introduction to Human Performance<br />

Testing (2)<br />

Discussion—1 hour; laboratory—3 hours. Introduction<br />

to human exercise testing and measurement.<br />

Safety procedures and measurement capabilities of<br />

the Human Performance Laboratory at <strong>UC</strong> <strong>Davis</strong>.<br />

Potential areas for graduate research.—I. (I.) Shaffrath<br />

221. Anthropometry in Physical Activity (3)<br />

Lecture—2 hours; laboratory—five 3-hour sessions to<br />

alternate weekly with five 1-hour discussion sessions.<br />

Prerequisite: Exercise Biology 101 and 102. Consideration<br />

of physical constitution, body proportions,<br />

and body composition in man as they affect physical<br />

performance, and of body structural and compositional<br />

changes accompanying prolonged, systematic<br />

physical conditioning.<br />

222. Metabolic Functions in Exercise (4)<br />

Lecture—2 hours; discussion—1 hour; laboratory—3<br />

hours. Prerequisite: Exercise Biology 102, Neurobiology,<br />

Physiology, and Behavior 101. Review of the<br />

current research literature on the metabolic<br />

responses to exercise in man; a laboratory survey of<br />

respiratory response, metabolic and water balances,<br />

blood gas adjustments and acid-base balance with<br />

particular reference to the effect of environmental<br />

conditions.<br />

224. Exercise Electrocardiography (2)<br />

Lecture—2 hours. Prerequisite: Exercise Biology 112<br />

or consent of instructor. Physiological bases and clinical<br />

implications of normal and abnormal exercise<br />

electrocardiograms (ECG) are treated in detail. Exercise<br />

prescription is considered as is the predictive<br />

significance of normal and abnormal ECG.<br />

225. Seminar in Cardiac Rehabilitation (2)<br />

Seminar—2 hours. Prerequisite: Exercise Biology<br />

112 or graduate standing and consent of instructor.<br />

Critical examination of literature dealing with the<br />

causes, prevention and treatment of cardiovascular<br />

disease with particular emphasis on intervention<br />

through cardiac rehabilitation. Both the theoretical<br />

bases and practical approaches to cardiac rehabilitation<br />

will be examined.<br />

227. Research Techniques in Biomechanics<br />

(4)<br />

Lecture—2 hours; laboratory—4 hours; term paper/<br />

discussion—1 hours. Prerequisite: consent of instructor,<br />

Mathematics 22B; Exercise Biology 115 recom-<br />

Quarter Offered: I=Fall, II=Winter, III=Spring, IV=Summer; 2007-<strong>2008</strong> offering in parentheses<br />

<strong>General</strong> Education (GE) credit: ArtHum=Arts and Humanities; SciEng=Science and Engineering; SocSci=Social Sciences; Div=Social-Cultural Diversity; Wrt=Writing Experience

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