CinePlex v3 Manual - Plexon Inc

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3.3.1.3 Restore Factory Settings This item sets all software and camera settings to their factory default values. 3.3.1.4 Extractor (File Mode only) This item brings up the Extractor dialog box which allows the user to extract desired static and dynamic data from a Plexon AVI file, placing it into Plexon Settings file format and/or formats suitable for use by database programs. For additional details, see “Using the Extractor” on page 115. 3.3.1.5 Exit This item closes the application. 3.3.2 View Menu Panes or tabs can be opened by selecting them in this menu. Clicking the Close button (x) in the upper right corner closes them. If windows and/or panes are messed up, go to Window Menu/Layout/Reset to Default Layout to return to a good state. Version 3.0 152
3.3.3 DVR Menu 3.3.3.1 Arm Clicking this item arms CinePlex Studio to accept a remote record command from the MAP system or other external hardware. 3.3.3.2 Record Clicking this item starts manual recording. 3.3.3.3 Pause Clicking this item pauses and resumes manual recording. This function only appears once manual recording has started. 3.3.3.4 Stop Clicking this item stops manual recording and closes the recorded file. 3.3.4 Tracker Menu 3.3.4.1 Object Contour Clicking this item sets the tracker mode to Object Contour. 3.3.4.2 LED Clicking this item sets the tracker mode to LED. 3.3.4.3 Reflective Colors Clicking this item sets the tracker mode to Reflective Colors. 3.3.5 Window Menu The Window menu is a standard menu of the Plexon User Interface. For more details, see “Window Menu” on page 11. Version 3.0 153
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Neurotechnology Research Systems Us
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CinePlex Video, Capture, Tracking,
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Plexon Inc Publication History iii
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Plexon Inc Contents v Publication H
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Plexon Inc CinePlex vii File Toolba
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Plexon Inc CinePlex ix Appendix B P
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Plexon Inc Chapter 1 CinePlex Syste
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— All-digital imaging with one or
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stamped with corresponding MAP time
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Editor features, see “Offline ext
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1.3 CinePlex System Hardware and So
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The Quad MAP Controller (QMC) can c
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1.4 Data Analysis After recording,
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Plexon Inc Chapter 2 Using CinePlex
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2.2 Designing the Experiment The pr
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2.4 Performing an Operational Test
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4 Start Sort Client program and ver
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7 Start CinePlex Studio program. Th
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will not be able to distinguish the
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2.5.4.2.3 LEDs in Light with Reflec
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the object and the yellow rectangle
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2.5.4.3.7 Multicolored Animal. The
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Selecting the Tracking Mode 1 Selec
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3 Check the color to track (by clic
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that sizes, positions and velocitie
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d e Measure its longest dimension i
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In the above image note that the si
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d e Measure the feature’s horizon
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i If the current color in the box n
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n Go to the slider next to the Vert
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6 Repeat these steps for each addit
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Defining Logical Events Logical eve
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1 Click the Add new combination of
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2.6 Executing the Experiment Plan T
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also use a variety of commercial so
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When the Start button is clicked, S
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Note: If Studio is armed on one day
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settings and use the file mode to d
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2 To set or change the folder locat
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3 Open a second Windows Explorer an
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2.7 Global Configuration Pane The G
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2.8 Source Pane The Source Pane def
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The Arena Definition is also used t
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• In Reflective Colors mode, pixe
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Configuring CinePlex Studio to trac
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emove progressively larger features
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The illustration below is taken aft
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Configuring CinePlex Studio to trac
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2 In the Video window a square area
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If Pure Colors is not selected, the
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Increase the threshold to reduce th
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2.10 Operating CinePlex Studio with
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To verify CinePlex Studio data acqu
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3 In the Control View, click Connec
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2.10.1.1 Control View VTViewer disp
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2.10.1.3 VTViewer Options The Optio
Page 113 and 114: 2.11 CinePlex Studio Offline Mode 2
Page 115 and 116: • Sequences Pane(s) (if behavior
Page 117 and 118: 2.13 CinePlex Studio Test Mode Test
Page 119 and 120: 2.14 Operation with the Quad MAP Co
Page 121 and 122: 6 Connect a push button switch (09-
Page 123 and 124: Version 3.0 111
Page 125 and 126: 15 On each CPX, launch and arm CPX.
Page 127 and 128: 2.15 Using the Extractor This chapt
Page 129 and 130: illustrates. Note that the Marker 4
Page 131 and 132: Plexon Inc Chapter 3 CinePlex Studi
Page 133 and 134: 3.2.1 Static Configuration Pane The
Page 135 and 136: 3.2.1.2.1 Camera Group. The Camera
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Page 139 and 140: 3.2.1.3 Tracking Tabs One of three
Page 141 and 142: 3.2.1.4.1 Object Contour Tracker Gr
Page 143 and 144: • Object Transparency - This sett
Page 145 and 146: • Cent. Grav. Size - This setting
Page 147 and 148: • Mrk1Threshold, Mrk2Threshold, M
Page 149 and 150: 3.2.2 Dynamic Configuration Pane Th
Page 151 and 152: • Subtract shapes - - this button
Page 153 and 154: • Add zone to selected sequence -
Page 155 and 156: • Delete selected tracking event
Page 157 and 158: 3.2.2.4.1 Toolbar. The toolbar cont
Page 159 and 160: Note: The effects of the Image Qual
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Page 163: 3.3 Menus The CinePlex Studio File
Page 167 and 168: 3.4 Toolbars The File, DVR and Trac
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Page 171 and 172: 3.6.3 Source Settings The Source se
Page 173 and 174: Plexon Inc Chapter 4 Using CinePlex
Page 175 and 176: 4.1.3 Changing and Saving Project F
Page 177 and 178: 4.2.2 Setting Up a New Project This
Page 179 and 180: 4.2.3 Understanding the CinePlex Ed
Page 181 and 182: 4.2.4 Defining a New Marker This pr
Page 183 and 184: Markers window in the Name column a
Page 185 and 186: 3 In the Format area, accept the de
Page 187 and 188: 4.4 Customizing the User Interface
Page 189 and 190: In the Input window, select an inpu
Page 191 and 192: matically advances the video by a p
Page 193 and 194: 4.5.3 Editing Markers and Marker Oc
Page 195 and 196: Selected Marker Occurrence, or clic
Page 197 and 198: 3 Select entries in the Marker 1 an
Page 199 and 200: is defined and selected. A more sop
Page 201 and 202: corner of the image. If the video r
Page 203 and 204: Finding marker occurrences with a b
Page 205 and 206: 2 Choose a marker from the Marker l
Page 207 and 208: Interpolating missing occurrences 1
Page 209 and 210: lowing illustration idx indicates t
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Page 213 and 214: 4.6 CinePlex Editor How-Tos This se
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However, do not expand the range so
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name and click Export! The Export C
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7 Repeat Step 6 until all the coord
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Plexon Inc Chapter 5 CinePlex Edito
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5.2 Main Window This section descri
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Show Complete Tail feature is usefu
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The color drawn at point p in the t
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— By pressing the PAGE UP or PAGE
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• Automatically Adjust Label Area
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Note: — Type - In the Type area,
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ox and select a different key. When
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Note: By default, if the Show check
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— Data Type: - This item contains
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5.2.8.1 Function The Messages windo
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• Add, Edit, and Delete Marker Oc
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• Reset Automatic Range Adjustmen
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5.3 Menus Menus provide access to C
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— Video Data Input File (AVI) - T
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After verifying that the correct fi
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• Which Markers - The default val
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• File - Type an export file name
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5.3.2 Edit Menu The following illus
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Note: The Edit Marker dialog box ma
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• Marker - This box shows the mar
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5.3.4.7 Step Forward This button ad
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5.3.6 Find Menu The following illus
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• Generate Selected - This button
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• Generate All - This button gene
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— Zone Interval • Operation to
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5.3.7.5 Snap-To Marker Occurrences
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— max - the largest time differen
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5.3.7.8.1 General Tab. • Initial
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5.3.7.8.3 Latency Correction Tab. F
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5.3.7.8.5 Audio Tab. • Available
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— Background - This is the backgr
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5.4 Toolbars CinePlex Editor includ
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5.5 How CinePlex Editor Creates Ini
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then load a neural data file that c
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Marker Type Abbr Information Stored
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From the Marker Occurrences window
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Note that applying this correction
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Snap-To Marker Occurrences tool des
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5.10 Analyzing CinePlex Studio data
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Plexon Inc Appendix A Installation
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Procedure for MAP/CPX Computer Hard
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A.2 Installation - Software This se
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 The following window appears twi
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14 Click Next on the window below.
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18 The CinePlex installation has no
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 Next, the Sentinel Key Drivers a
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15 Click Finish on the window below
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2 The Welcome window appears. Press
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6 The Select Components window appe
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10 Nothing else will be installed,
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3 After step 6 continue the procedu
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Note: to remote upgrades. If a remo
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Plexon Inc Appendix B Problem Resol
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toggle switch above these connector
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the CinePlex software will be requi
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1 Remove the TIM card and check tha
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1 Stop running all unnecessary appl
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B.3 CinePlex Studio Messages The ta
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Table 1: CinePlex Studio Simple Mes
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Table 2: CinePlex Studio Critical M
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Plexon Inc Appendix C Lens Selectio
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C.2 Lens Selection For CinePlex Ver
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C.3 Experiment Design C.3.1 Field o
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The formula to calculate the optimu
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3 Three Arm Phenolic Knob (small) -
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• A local professional camera or
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a Place the sandwich plate on the o
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7 The tripod adaptor should already
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Port 1 Port 2 Port 1 Port 2 Port 3
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3 Using the Plexon camera mounting
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Plexon Inc Appendix D Plexon User I
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D.2 Screen Elements D.2.1 Menus The
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D.2.2 Toolbars Each toolbar has a d
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• Close Button - The Close button
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— Hidden Windows - Docked windows
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D.3 Standard Menu Items and Dialogs
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D.3.2 Run Menu The purpose of the R
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— Licensing - Clicking the Licens
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D.3.4 Messages Window The Messages
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D.4 Customization Although the menu
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• Category - This is a list of al
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• Buttons - The toolbar buttons a
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Plexon Inc Appendix E Cabling Guide
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E.2 Typical MAP/CPX Cabling Diagram
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E.3 Typical MAP/CPX System Cabling
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E.3.2 MAP/CPX System with Two Video
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E.4 MAP/CPX Cable Images Version 3.
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E.5.2.2 With CHUB Version 3.0 E-11
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E.5.3.2 Two Video Cameras Version 3
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* CinePlex, Plexon, and the Plexon
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