CinePlex v3 Manual - Plexon Inc

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5 5.2.7.2 Features The columns of the Audio Output window include: • Name - This column contains the name of each marker. • Type - This column contains the type of each marker. • Count - This column contains the number of occurrences of each marker. • Play - This column contains a checkbox that controls whether any sound will be played when the Markers or neural spikes of that type pass by the ‘current time’ marker during animated playback. • Sound - This column contains a droplist that lists all the available sounds that CinePlex Editor can play. If the Play checkbox is checked, the sound selected in the Droplist will play when an occurrence of the corresponding Marker or neural spike is encountered during playback. The contents of this list can be controlled from the Audio tab of the Tools | Options... dialog, see “Options” on page 264. 5.2.7.3 Audio Output Right-click Menu The Audio Output Window has a right-click context menu that contains the following menu entries: • Show Units - The Audio Output view can show just one line per neural spike channel (the default). In this mode, CinePlex Editor will play the same selected sound when any spike occurs on that channel, regardless of the unit designation of that spike. When Show Units is checked, each unit on each channel gets a separate line, as shown in the above screenshot. In this mode, every unit can have a different sound mapped to it and can be independently enabled or disabled for playing. This selection is equivalent to checking or unchecking the ‘Show Units in the Audio Output Window’ checkbox on the Tools | Options | Audio tab. • Select Sounds - Clicking this item will show the Audio tab on the Tools | Options dialog box, which allows loading new sounds from WAV files so that they are available for mapping to Markers or Units. 5.2.8 Messages Window To open the Messages window (hidden by default), hover the mouse over the Messages tab of the sidebar tabs at the right side of the screen, select Messages from the View menu, or click the Messages View button on the toolbar. 228 CinePlex
5.2.8.1 Function The Messages window displays timestamps and application events and is used for troubleshooting purposes by Plexon Support. 5.2.8.2 Features • Time - This column contains timestamps of the events. • Message - This column contains descriptions of the events. 5.2.8.3 Messages Right-click Menu Right-clicking the mouse in the Messages window displays the right-click menu. • Erase - Clicking this item erases all messages from the Messages window. • Pause - If this item is checked, message logging is paused. • Show Debug Messages - If this item is checked, then debug messages will appear in the Messages window. This can be useful for troubleshooting. • Select and Copy All - Clicking this item selects all the messages and copies them to the clipboard. • Save Log to File - Clicking this item displays a standard file save dialog box and allows the message log to be saved to a file. • Mail Log to Plexon - Clicking this item will sent the messages log to Plexon for troubleshooting. Note that a mail client and associated account information must be present on the computer for E-mail to work. 5.2.9 Marker Occurrences Window The Marker Occurrences window includes an entry for each occurrence of the currently-selected marker. The currently-selected marker occurrence appears with a > in the first column. Click any marker to make it the currently-selected marker. More than one Marker Occurrences window may be opened. The win- Version 3.0 229
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Neurotechnology Research Systems Us
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CinePlex Video, Capture, Tracking,
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Plexon Inc Publication History iii
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Plexon Inc Contents v Publication H
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Plexon Inc CinePlex vii File Toolba
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Plexon Inc CinePlex ix Appendix B P
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Plexon Inc Chapter 1 CinePlex Syste
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— All-digital imaging with one or
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stamped with corresponding MAP time
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Editor features, see “Offline ext
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1.3 CinePlex System Hardware and So
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The Quad MAP Controller (QMC) can c
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1.4 Data Analysis After recording,
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Plexon Inc Chapter 2 Using CinePlex
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2.2 Designing the Experiment The pr
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2.4 Performing an Operational Test
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4 Start Sort Client program and ver
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7 Start CinePlex Studio program. Th
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will not be able to distinguish the
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2.5.4.2.3 LEDs in Light with Reflec
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the object and the yellow rectangle
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2.5.4.3.7 Multicolored Animal. The
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Selecting the Tracking Mode 1 Selec
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3 Check the color to track (by clic
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that sizes, positions and velocitie
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d e Measure its longest dimension i
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In the above image note that the si
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d e Measure the feature’s horizon
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i If the current color in the box n
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n Go to the slider next to the Vert
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6 Repeat these steps for each addit
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Defining Logical Events Logical eve
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1 Click the Add new combination of
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2.6 Executing the Experiment Plan T
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also use a variety of commercial so
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When the Start button is clicked, S
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Note: If Studio is armed on one day
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settings and use the file mode to d
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2 To set or change the folder locat
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3 Open a second Windows Explorer an
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2.7 Global Configuration Pane The G
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2.8 Source Pane The Source Pane def
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The Arena Definition is also used t
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• In Reflective Colors mode, pixe
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Configuring CinePlex Studio to trac
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emove progressively larger features
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The illustration below is taken aft
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Configuring CinePlex Studio to trac
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2 In the Video window a square area
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If Pure Colors is not selected, the
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Increase the threshold to reduce th
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2.10 Operating CinePlex Studio with
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To verify CinePlex Studio data acqu
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3 In the Control View, click Connec
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2.10.1.1 Control View VTViewer disp
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2.10.1.3 VTViewer Options The Optio
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2.11 CinePlex Studio Offline Mode 2
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• Sequences Pane(s) (if behavior
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2.13 CinePlex Studio Test Mode Test
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2.14 Operation with the Quad MAP Co
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6 Connect a push button switch (09-
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Version 3.0 111
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15 On each CPX, launch and arm CPX.
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2.15 Using the Extractor This chapt
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illustrates. Note that the Marker 4
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Plexon Inc Chapter 3 CinePlex Studi
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3.2.1 Static Configuration Pane The
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3.2.1.2.1 Camera Group. The Camera
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• Brightness - this setting speci
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3.2.1.3 Tracking Tabs One of three
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3.2.1.4.1 Object Contour Tracker Gr
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• Object Transparency - This sett
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• Cent. Grav. Size - This setting
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• Mrk1Threshold, Mrk2Threshold, M
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3.2.2 Dynamic Configuration Pane Th
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• Subtract shapes - - this button
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• Add zone to selected sequence -
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• Delete selected tracking event
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3.2.2.4.1 Toolbar. The toolbar cont
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Note: The effects of the Image Qual
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— Name - this value depends on wh
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3.3 Menus The CinePlex Studio File
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3.3.3 DVR Menu 3.3.3.1 Arm Clicking
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3.4 Toolbars The File, DVR and Trac
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ow,time,x1,y1,x2,y2,x3,y3,x4,y4,x5,
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3.6.3 Source Settings The Source se
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Plexon Inc Chapter 4 Using CinePlex
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4.1.3 Changing and Saving Project F
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4.2.2 Setting Up a New Project This
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4.2.3 Understanding the CinePlex Ed
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4.2.4 Defining a New Marker This pr
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Markers window in the Name column a
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3 In the Format area, accept the de
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4.4 Customizing the User Interface
Page 189 and 190: In the Input window, select an inpu
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Page 205 and 206: 2 Choose a marker from the Marker l
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Page 211 and 212: 6 The user may set the columns for
Page 213 and 214: 4.6 CinePlex Editor How-Tos This se
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Page 219 and 220: 7 Repeat Step 6 until all the coord
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Page 223 and 224: 5.2 Main Window This section descri
Page 225 and 226: Show Complete Tail feature is usefu
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Page 229 and 230: — By pressing the PAGE UP or PAGE
Page 231 and 232: • Automatically Adjust Label Area
Page 233 and 234: Note: — Type - In the Type area,
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Page 245 and 246: • Reset Automatic Range Adjustmen
Page 247 and 248: 5.3 Menus Menus provide access to C
Page 249 and 250: — Video Data Input File (AVI) - T
Page 251 and 252: After verifying that the correct fi
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Page 257 and 258: 5.3.2 Edit Menu The following illus
Page 259 and 260: Note: The Edit Marker dialog box ma
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Page 263 and 264: 5.3.4.7 Step Forward This button ad
Page 265 and 266: 5.3.6 Find Menu The following illus
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Page 271 and 272: — Zone Interval • Operation to
Page 273 and 274: 5.3.7.5 Snap-To Marker Occurrences
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Page 277 and 278: 5.3.7.8.1 General Tab. • Initial
Page 279 and 280: 5.3.7.8.3 Latency Correction Tab. F
Page 281 and 282: 5.3.7.8.5 Audio Tab. • Available
Page 283 and 284: — Background - This is the backgr
Page 285 and 286: 5.4 Toolbars CinePlex Editor includ
Page 287 and 288: 5.5 How CinePlex Editor Creates Ini
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Marker Type Abbr Information Stored
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From the Marker Occurrences window
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Note that applying this correction
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Snap-To Marker Occurrences tool des
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5.10 Analyzing CinePlex Studio data
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Plexon Inc Appendix A Installation
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Procedure for MAP/CPX Computer Hard
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A.2 Installation - Software This se
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 The following window appears twi
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14 Click Next on the window below.
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18 The CinePlex installation has no
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 Next, the Sentinel Key Drivers a
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15 Click Finish on the window below
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2 The Welcome window appears. Press
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6 The Select Components window appe
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10 Nothing else will be installed,
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3 After step 6 continue the procedu
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Note: to remote upgrades. If a remo
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Plexon Inc Appendix B Problem Resol
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toggle switch above these connector
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the CinePlex software will be requi
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1 Remove the TIM card and check tha
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1 Stop running all unnecessary appl
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B.3 CinePlex Studio Messages The ta
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Table 1: CinePlex Studio Simple Mes
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Table 2: CinePlex Studio Critical M
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Plexon Inc Appendix C Lens Selectio
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C.2 Lens Selection For CinePlex Ver
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C.3 Experiment Design C.3.1 Field o
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The formula to calculate the optimu
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3 Three Arm Phenolic Knob (small) -
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• A local professional camera or
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a Place the sandwich plate on the o
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7 The tripod adaptor should already
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Port 1 Port 2 Port 1 Port 2 Port 3
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3 Using the Plexon camera mounting
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Plexon Inc Appendix D Plexon User I
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D.2 Screen Elements D.2.1 Menus The
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D.2.2 Toolbars Each toolbar has a d
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• Close Button - The Close button
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— Hidden Windows - Docked windows
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D.3 Standard Menu Items and Dialogs
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D.3.2 Run Menu The purpose of the R
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— Licensing - Clicking the Licens
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D.3.4 Messages Window The Messages
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D.4 Customization Although the menu
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• Category - This is a list of al
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• Buttons - The toolbar buttons a
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Plexon Inc Appendix E Cabling Guide
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E.2 Typical MAP/CPX Cabling Diagram
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E.3 Typical MAP/CPX System Cabling
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E.3.2 MAP/CPX System with Two Video
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E.4 MAP/CPX Cable Images Version 3.
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E.5.2.2 With CHUB Version 3.0 E-11
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E.5.3.2 Two Video Cameras Version 3
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* CinePlex, Plexon, and the Plexon
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