CinePlex v3 Manual - Plexon Inc

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5 5.2.4.2 Features The Input window includes selections for the following three actions: • Keystroke – The user may bind a keystroke to the current marker, which can be used to Find the next occurrence of the marker or Insert a new occurrence of the marker. Note: If <strong>CinePlex</strong> Editor is in looping mode (see “Understanding Looping” on page 174), the search for the next marker occurrence wraps around the end of the file and continues the search at the beginning. • Button – Specific marker buttons appear in the array on the right side of the Input window. Click a marker button to Find the next occurrence of the marker or Insert a new occurrence of the marker. • Left-Click – This item refers to a click of the left mouse button in the Activity window. Select finds the nearest occurrence of the selected marker. Insert inserts a new occurrence of the selected marker at the time corresponding to the mouse pointer position when the left mouse button is clicked. 5.2.5 Channels Window 5.2.5.1 Function The Channels window displays all of the channels in the neural data file and their associated properties. 5.2.5.2 Features The columns in the Channels window list the following information for each channel: • Name – Shows the name of the channel • Type – Indicates the type of channel, either spike or continuous • Count – Shows the number of spikes for spike channels, or the number of samples for continuous channels • Show – When selected, shows the spikes or continuous data from that channel in the Activity window • Unsorted, Unit a, b, c, ... – Indicates the number of spikes in the channels that are unsorted, or that belong to Unit a, Unit b, etc. 224 <strong>CinePlex</strong>
Note: By default, if the Show checkbox is clear, any continuous data channels in the neural data file do not appear in the Activity window. 5.2.5.3 Channels Right-click Menu Clicking the right mouse button will open a right-click menu with the following items: • Show All Channels With Spikes - Clicking this item resets the window to show all channels with spikes. • Un-Show All Channels - Clicking this item resets the window to hide all channels. • Show Only Selected Channel - Clicking this item resets the window to only show the selected channel. • Set As Top Row - Clicking this item sets selected columns to the same value as the same columns in the top row. 5.2.6 File Info Window The File Info window does not appear by default. To open the File Info window, from the View menu, select File Info View. Version 3.0 225
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Neurotechnology Research Systems Us
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CinePlex Video, Capture, Tracking,
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Plexon Inc Publication History iii
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Plexon Inc Contents v Publication H
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Plexon Inc CinePlex vii File Toolba
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Plexon Inc CinePlex ix Appendix B P
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Plexon Inc Chapter 1 CinePlex Syste
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— All-digital imaging with one or
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stamped with corresponding MAP time
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Editor features, see “Offline ext
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1.3 CinePlex System Hardware and So
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The Quad MAP Controller (QMC) can c
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1.4 Data Analysis After recording,
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Plexon Inc Chapter 2 Using CinePlex
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2.2 Designing the Experiment The pr
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2.4 Performing an Operational Test
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4 Start Sort Client program and ver
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7 Start CinePlex Studio program. Th
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will not be able to distinguish the
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2.5.4.2.3 LEDs in Light with Reflec
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the object and the yellow rectangle
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2.5.4.3.7 Multicolored Animal. The
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Selecting the Tracking Mode 1 Selec
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3 Check the color to track (by clic
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that sizes, positions and velocitie
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d e Measure its longest dimension i
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In the above image note that the si
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d e Measure the feature’s horizon
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i If the current color in the box n
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n Go to the slider next to the Vert
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6 Repeat these steps for each addit
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Defining Logical Events Logical eve
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1 Click the Add new combination of
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2.6 Executing the Experiment Plan T
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also use a variety of commercial so
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When the Start button is clicked, S
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Note: If Studio is armed on one day
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settings and use the file mode to d
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2 To set or change the folder locat
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3 Open a second Windows Explorer an
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2.7 Global Configuration Pane The G
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2.8 Source Pane The Source Pane def
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The Arena Definition is also used t
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• In Reflective Colors mode, pixe
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Configuring CinePlex Studio to trac
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emove progressively larger features
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The illustration below is taken aft
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Configuring CinePlex Studio to trac
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2 In the Video window a square area
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If Pure Colors is not selected, the
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Increase the threshold to reduce th
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2.10 Operating CinePlex Studio with
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To verify CinePlex Studio data acqu
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3 In the Control View, click Connec
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2.10.1.1 Control View VTViewer disp
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2.10.1.3 VTViewer Options The Optio
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2.11 CinePlex Studio Offline Mode 2
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• Sequences Pane(s) (if behavior
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2.13 CinePlex Studio Test Mode Test
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2.14 Operation with the Quad MAP Co
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6 Connect a push button switch (09-
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Version 3.0 111
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15 On each CPX, launch and arm CPX.
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2.15 Using the Extractor This chapt
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illustrates. Note that the Marker 4
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Plexon Inc Chapter 3 CinePlex Studi
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3.2.1 Static Configuration Pane The
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3.2.1.2.1 Camera Group. The Camera
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• Brightness - this setting speci
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3.2.1.3 Tracking Tabs One of three
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3.2.1.4.1 Object Contour Tracker Gr
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• Object Transparency - This sett
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• Cent. Grav. Size - This setting
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• Mrk1Threshold, Mrk2Threshold, M
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3.2.2 Dynamic Configuration Pane Th
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• Subtract shapes - - this button
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• Add zone to selected sequence -
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• Delete selected tracking event
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3.2.2.4.1 Toolbar. The toolbar cont
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Note: The effects of the Image Qual
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— Name - this value depends on wh
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3.3 Menus The CinePlex Studio File
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3.3.3 DVR Menu 3.3.3.1 Arm Clicking
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3.4 Toolbars The File, DVR and Trac
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ow,time,x1,y1,x2,y2,x3,y3,x4,y4,x5,
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3.6.3 Source Settings The Source se
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Plexon Inc Chapter 4 Using CinePlex
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4.1.3 Changing and Saving Project F
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4.2.2 Setting Up a New Project This
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4.2.3 Understanding the CinePlex Ed
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4.2.4 Defining a New Marker This pr
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Markers window in the Name column a
Page 185 and 186: 3 In the Format area, accept the de
Page 187 and 188: 4.4 Customizing the User Interface
Page 189 and 190: In the Input window, select an inpu
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Page 193 and 194: 4.5.3 Editing Markers and Marker Oc
Page 195 and 196: Selected Marker Occurrence, or clic
Page 197 and 198: 3 Select entries in the Marker 1 an
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Page 203 and 204: Finding marker occurrences with a b
Page 205 and 206: 2 Choose a marker from the Marker l
Page 207 and 208: Interpolating missing occurrences 1
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Page 211 and 212: 6 The user may set the columns for
Page 213 and 214: 4.6 CinePlex Editor How-Tos This se
Page 215 and 216: However, do not expand the range so
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Page 219 and 220: 7 Repeat Step 6 until all the coord
Page 221 and 222: Plexon Inc Chapter 5 CinePlex Edito
Page 223 and 224: 5.2 Main Window This section descri
Page 225 and 226: Show Complete Tail feature is usefu
Page 227 and 228: The color drawn at point p in the t
Page 229 and 230: — By pressing the PAGE UP or PAGE
Page 231 and 232: • Automatically Adjust Label Area
Page 233 and 234: Note: — Type - In the Type area,
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Page 241 and 242: 5.2.8.1 Function The Messages windo
Page 243 and 244: • Add, Edit, and Delete Marker Oc
Page 245 and 246: • Reset Automatic Range Adjustmen
Page 247 and 248: 5.3 Menus Menus provide access to C
Page 249 and 250: — Video Data Input File (AVI) - T
Page 251 and 252: After verifying that the correct fi
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Page 257 and 258: 5.3.2 Edit Menu The following illus
Page 259 and 260: Note: The Edit Marker dialog box ma
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Page 263 and 264: 5.3.4.7 Step Forward This button ad
Page 265 and 266: 5.3.6 Find Menu The following illus
Page 267 and 268: • Generate Selected - This button
Page 269 and 270: • Generate All - This button gene
Page 271 and 272: — Zone Interval • Operation to
Page 273 and 274: 5.3.7.5 Snap-To Marker Occurrences
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Page 277 and 278: 5.3.7.8.1 General Tab. • Initial
Page 279 and 280: 5.3.7.8.3 Latency Correction Tab. F
Page 281 and 282: 5.3.7.8.5 Audio Tab. • Available
Page 283 and 284: — Background - This is the backgr
Page 285 and 286: 5.4 Toolbars CinePlex Editor includ
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5.5 How CinePlex Editor Creates Ini
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then load a neural data file that c
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Marker Type Abbr Information Stored
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From the Marker Occurrences window
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Note that applying this correction
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Snap-To Marker Occurrences tool des
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5.10 Analyzing CinePlex Studio data
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Plexon Inc Appendix A Installation
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Procedure for MAP/CPX Computer Hard
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A.2 Installation - Software This se
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 The following window appears twi
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14 Click Next on the window below.
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18 The CinePlex installation has no
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 Next, the Sentinel Key Drivers a
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15 Click Finish on the window below
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2 The Welcome window appears. Press
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6 The Select Components window appe
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10 Nothing else will be installed,
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3 After step 6 continue the procedu
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Note: to remote upgrades. If a remo
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Plexon Inc Appendix B Problem Resol
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toggle switch above these connector
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the CinePlex software will be requi
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1 Remove the TIM card and check tha
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1 Stop running all unnecessary appl
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B.3 CinePlex Studio Messages The ta
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Table 1: CinePlex Studio Simple Mes
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Table 2: CinePlex Studio Critical M
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Plexon Inc Appendix C Lens Selectio
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C.2 Lens Selection For CinePlex Ver
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C.3 Experiment Design C.3.1 Field o
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The formula to calculate the optimu
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3 Three Arm Phenolic Knob (small) -
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• A local professional camera or
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a Place the sandwich plate on the o
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7 The tripod adaptor should already
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Port 1 Port 2 Port 1 Port 2 Port 3
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3 Using the Plexon camera mounting
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Plexon Inc Appendix D Plexon User I
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D.2 Screen Elements D.2.1 Menus The
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D.2.2 Toolbars Each toolbar has a d
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• Close Button - The Close button
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— Hidden Windows - Docked windows
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D.3 Standard Menu Items and Dialogs
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D.3.2 Run Menu The purpose of the R
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— Licensing - Clicking the Licens
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D.3.4 Messages Window The Messages
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D.4 Customization Although the menu
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• Category - This is a list of al
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• Buttons - The toolbar buttons a
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Plexon Inc Appendix E Cabling Guide
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E.2 Typical MAP/CPX Cabling Diagram
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E.3 Typical MAP/CPX System Cabling
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E.3.2 MAP/CPX System with Two Video
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E.4 MAP/CPX Cable Images Version 3.
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E.5.2.2 With CHUB Version 3.0 E-11
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E.5.3.2 Two Video Cameras Version 3
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* CinePlex, Plexon, and the Plexon
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CinePlex v3 Manual - Plexon Inc

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