CinePlex v3 Manual - Plexon Inc

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4 4.2 Getting Started This section describes a quick-start example to provide familiarization with CinePlex Editor. The screens, views, and operations mentioned in the quick-start procedure appear in much greater detail in the reference chapter; see Chapter 5, CinePlex Editor Reference. 4.2.1 Using the Quick Start Files This quick-start example uses two sample data files that do not install with Cine- Plex Editor: CM_Quickstart.plx and CM_Quickstart.avi. Because these two files are very large, they are located in the Quickstart folder on the CinePlex installation CD. As an alternative, instead of using CM_Quickstart.plx and CM_Quickstart.avi, the user may use any video data file (AVI) collected with CinePlex Studio together with a neural data file (PLX, NEX, DVT) collected by a tool such as Recorder or MAP. Before using the quick-start sample files, Plexon recommends copying them to the local disk on the computer to improve performance. The quick-start example consists of the following series of procedures: • 4.2.2 Setting Up a New Project • 4.2.3 Understanding the CinePlex Editor Main View • 4.2.4 Defining a New Marker • 4.2.5 Creating Marker Occurrences • 4.2.6 Saving and Exporting the Data • 4.2.7 Re-opening a Project File 164 CinePlex
4.2.2 Setting Up a New Project This procedure covers the steps required to set up a new project. 1 Click the CinePlex Editor desktop icon or click CinePlex Editor on the Windows Start menu. The Welcome To CinePlex Editor dialog box opens. Note: The Welcome to CinePlex Editor dialog box provides a quick way to start a new project, load an existing project file, or load a recentlyused project file. The first time CinePlex Editor runs, CPJ files do not appear in the list box and Open the Selected Recent CinePlex Project is unavailable. 2 Click Start a New CinePlex Project, which starts the New Project Wizard, which is a series of dialog boxes that guide the user through the process of setting up a new project. The New Project Wizard opens. Version 3.0 165
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Neurotechnology Research Systems Us
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CinePlex Video, Capture, Tracking,
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Plexon Inc Publication History iii
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Plexon Inc Contents v Publication H
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Plexon Inc CinePlex vii File Toolba
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Plexon Inc CinePlex ix Appendix B P
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Plexon Inc Chapter 1 CinePlex Syste
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— All-digital imaging with one or
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stamped with corresponding MAP time
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Editor features, see “Offline ext
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1.3 CinePlex System Hardware and So
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The Quad MAP Controller (QMC) can c
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1.4 Data Analysis After recording,
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Plexon Inc Chapter 2 Using CinePlex
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2.2 Designing the Experiment The pr
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2.4 Performing an Operational Test
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4 Start Sort Client program and ver
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7 Start CinePlex Studio program. Th
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will not be able to distinguish the
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2.5.4.2.3 LEDs in Light with Reflec
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the object and the yellow rectangle
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2.5.4.3.7 Multicolored Animal. The
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Selecting the Tracking Mode 1 Selec
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3 Check the color to track (by clic
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that sizes, positions and velocitie
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d e Measure its longest dimension i
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In the above image note that the si
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d e Measure the feature’s horizon
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i If the current color in the box n
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n Go to the slider next to the Vert
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6 Repeat these steps for each addit
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Defining Logical Events Logical eve
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1 Click the Add new combination of
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2.6 Executing the Experiment Plan T
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also use a variety of commercial so
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When the Start button is clicked, S
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Note: If Studio is armed on one day
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settings and use the file mode to d
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2 To set or change the folder locat
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3 Open a second Windows Explorer an
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2.7 Global Configuration Pane The G
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2.8 Source Pane The Source Pane def
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The Arena Definition is also used t
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• In Reflective Colors mode, pixe
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Configuring CinePlex Studio to trac
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emove progressively larger features
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The illustration below is taken aft
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Configuring CinePlex Studio to trac
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2 In the Video window a square area
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If Pure Colors is not selected, the
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Increase the threshold to reduce th
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2.10 Operating CinePlex Studio with
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To verify CinePlex Studio data acqu
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3 In the Control View, click Connec
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2.10.1.1 Control View VTViewer disp
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2.10.1.3 VTViewer Options The Optio
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2.11 CinePlex Studio Offline Mode 2
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• Sequences Pane(s) (if behavior
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2.13 CinePlex Studio Test Mode Test
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2.14 Operation with the Quad MAP Co
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6 Connect a push button switch (09-
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Version 3.0 111
Page 125 and 126: 15 On each CPX, launch and arm CPX.
Page 127 and 128: 2.15 Using the Extractor This chapt
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Page 131 and 132: Plexon Inc Chapter 3 CinePlex Studi
Page 133 and 134: 3.2.1 Static Configuration Pane The
Page 135 and 136: 3.2.1.2.1 Camera Group. The Camera
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Page 139 and 140: 3.2.1.3 Tracking Tabs One of three
Page 141 and 142: 3.2.1.4.1 Object Contour Tracker Gr
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Page 149 and 150: 3.2.2 Dynamic Configuration Pane Th
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Page 163 and 164: 3.3 Menus The CinePlex Studio File
Page 165 and 166: 3.3.3 DVR Menu 3.3.3.1 Arm Clicking
Page 167 and 168: 3.4 Toolbars The File, DVR and Trac
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Page 171 and 172: 3.6.3 Source Settings The Source se
Page 173 and 174: Plexon Inc Chapter 4 Using CinePlex
Page 175: 4.1.3 Changing and Saving Project F
Page 179 and 180: 4.2.3 Understanding the CinePlex Ed
Page 181 and 182: 4.2.4 Defining a New Marker This pr
Page 183 and 184: Markers window in the Name column a
Page 185 and 186: 3 In the Format area, accept the de
Page 187 and 188: 4.4 Customizing the User Interface
Page 189 and 190: In the Input window, select an inpu
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Page 193 and 194: 4.5.3 Editing Markers and Marker Oc
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Page 207 and 208: Interpolating missing occurrences 1
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Page 213 and 214: 4.6 CinePlex Editor How-Tos This se
Page 215 and 216: However, do not expand the range so
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Page 223 and 224: 5.2 Main Window This section descri
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The color drawn at point p in the t
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— By pressing the PAGE UP or PAGE
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• Automatically Adjust Label Area
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Note: — Type - In the Type area,
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ox and select a different key. When
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Note: By default, if the Show check
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— Data Type: - This item contains
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5.2.8.1 Function The Messages windo
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• Add, Edit, and Delete Marker Oc
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• Reset Automatic Range Adjustmen
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5.3 Menus Menus provide access to C
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— Video Data Input File (AVI) - T
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After verifying that the correct fi
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• Which Markers - The default val
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• File - Type an export file name
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5.3.2 Edit Menu The following illus
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Note: The Edit Marker dialog box ma
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• Marker - This box shows the mar
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5.3.4.7 Step Forward This button ad
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5.3.6 Find Menu The following illus
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• Generate Selected - This button
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• Generate All - This button gene
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— Zone Interval • Operation to
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5.3.7.5 Snap-To Marker Occurrences
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— max - the largest time differen
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5.3.7.8.1 General Tab. • Initial
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5.3.7.8.3 Latency Correction Tab. F
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5.3.7.8.5 Audio Tab. • Available
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— Background - This is the backgr
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5.4 Toolbars CinePlex Editor includ
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5.5 How CinePlex Editor Creates Ini
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then load a neural data file that c
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Marker Type Abbr Information Stored
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From the Marker Occurrences window
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Note that applying this correction
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Snap-To Marker Occurrences tool des
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5.10 Analyzing CinePlex Studio data
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Plexon Inc Appendix A Installation
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Procedure for MAP/CPX Computer Hard
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A.2 Installation - Software This se
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 The following window appears twi
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14 Click Next on the window below.
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18 The CinePlex installation has no
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 Next, the Sentinel Key Drivers a
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15 Click Finish on the window below
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2 The Welcome window appears. Press
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6 The Select Components window appe
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10 Nothing else will be installed,
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3 After step 6 continue the procedu
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Note: to remote upgrades. If a remo
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Plexon Inc Appendix B Problem Resol
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toggle switch above these connector
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the CinePlex software will be requi
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1 Remove the TIM card and check tha
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1 Stop running all unnecessary appl
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B.3 CinePlex Studio Messages The ta
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Table 1: CinePlex Studio Simple Mes
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Table 2: CinePlex Studio Critical M
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Plexon Inc Appendix C Lens Selectio
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C.2 Lens Selection For CinePlex Ver
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C.3 Experiment Design C.3.1 Field o
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The formula to calculate the optimu
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3 Three Arm Phenolic Knob (small) -
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• A local professional camera or
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a Place the sandwich plate on the o
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7 The tripod adaptor should already
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Port 1 Port 2 Port 1 Port 2 Port 3
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3 Using the Plexon camera mounting
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Plexon Inc Appendix D Plexon User I
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D.2 Screen Elements D.2.1 Menus The
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D.2.2 Toolbars Each toolbar has a d
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• Close Button - The Close button
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— Hidden Windows - Docked windows
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D.3 Standard Menu Items and Dialogs
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D.3.2 Run Menu The purpose of the R
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— Licensing - Clicking the Licens
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D.3.4 Messages Window The Messages
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D.4 Customization Although the menu
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• Category - This is a list of al
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• Buttons - The toolbar buttons a
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Plexon Inc Appendix E Cabling Guide
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E.2 Typical MAP/CPX Cabling Diagram
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E.3 Typical MAP/CPX System Cabling
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E.3.2 MAP/CPX System with Two Video
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E.4 MAP/CPX Cable Images Version 3.
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E.5.2.2 With CHUB Version 3.0 E-11
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E.5.3.2 Two Video Cameras Version 3
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* CinePlex, Plexon, and the Plexon
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