CinePlex v3 Manual - Plexon Inc

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5 dow also changes title and columns depending on the marker type of the currently-selected marker. 5.2.9.1 Function The function of the Marker Occurrences window is to display information about all occurrences of the currently selected marker. 5.2.9.2 Features The features of the Marker Occurrences window will vary according to the type of selected marker. A coordinate marker will have the timestamp, an x-coordinate, and a y-coordinate while an interval marker will have the beginning timestamp and the ending timestamp as shown in the illustrations below. Scrolling the Activity window or animate time causes the Marker Occurrences window to update continually to show the marker occurrences closest to the current time. 5.2.9.3 Marker Occurrences Right-click Menu Right-clicking the mouse in the Marker Occurrences window opens a rightclick menu. • Go to Selected Marker Occurrence Time - Clicking this item makes the time of the currently-selected marker occurrence the current time. This will advance the current frame and reposition the Activity window. 230 <strong>CinePlex</strong>
• Add, Edit, and Delete Marker Occurrence Menu Items - The items in the section below ‘Go to Selected Marker Occurrence Time’ except for “Delete Highlighted Marker Occurrences” are the same as the items on the Edit menu. For complete information, see “Edit Menu” on page 245. There are three different ways to display marker occurrence data: • Show Values in Decimal - Clicking this item displays the marker occurrence data in normal decimal format. • Show Values in Hex - Clicking this item displays the marker occurrence data in hexadecimal format. • Show Values as VT Bit Fields - Clicking this item displays the marker occurrence data as VideoTracker (VT) bit fields. For more information on VT bit fields, see “Digital VideoTracker (DVT) Files” on page 156. • Copy and Select All - These items function as standard Windows copy and select functions. • Properties - Clicking this item displays the Marker Occurrences View Properties dialog box.Clicking this item enables the configuration of marker occurrence windows to show the marker occurrences of a specific marker instead of the currently selected marker. This capability may be used to display marker occurrences simultaneously for different markers on screen. — Marker To Display - This area contains a drop-down list of markers. The currently selected marker appears in the dimmed list box. — Display Format for Scalar Marker Values - This area contains items that control the display format for Scalar markers: – Decimal – This item displays the Scalar markers in decimal format. – Hex – This item displays the Scalar markers in hexadecimal format. – VideoTracker – This item displays the Scalar markers in <strong>Plexon</strong> VideoTracker format. Version 3.0 231
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Neurotechnology Research Systems Us
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CinePlex Video, Capture, Tracking,
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Plexon Inc Publication History iii
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Plexon Inc Contents v Publication H
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Plexon Inc CinePlex vii File Toolba
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Plexon Inc CinePlex ix Appendix B P
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Plexon Inc Chapter 1 CinePlex Syste
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— All-digital imaging with one or
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stamped with corresponding MAP time
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Editor features, see “Offline ext
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1.3 CinePlex System Hardware and So
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The Quad MAP Controller (QMC) can c
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1.4 Data Analysis After recording,
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Plexon Inc Chapter 2 Using CinePlex
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2.2 Designing the Experiment The pr
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2.4 Performing an Operational Test
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4 Start Sort Client program and ver
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7 Start CinePlex Studio program. Th
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will not be able to distinguish the
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2.5.4.2.3 LEDs in Light with Reflec
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the object and the yellow rectangle
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2.5.4.3.7 Multicolored Animal. The
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Selecting the Tracking Mode 1 Selec
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3 Check the color to track (by clic
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that sizes, positions and velocitie
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d e Measure its longest dimension i
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In the above image note that the si
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d e Measure the feature’s horizon
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i If the current color in the box n
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n Go to the slider next to the Vert
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6 Repeat these steps for each addit
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Defining Logical Events Logical eve
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1 Click the Add new combination of
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2.6 Executing the Experiment Plan T
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also use a variety of commercial so
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When the Start button is clicked, S
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Note: If Studio is armed on one day
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settings and use the file mode to d
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2 To set or change the folder locat
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3 Open a second Windows Explorer an
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2.7 Global Configuration Pane The G
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2.8 Source Pane The Source Pane def
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The Arena Definition is also used t
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• In Reflective Colors mode, pixe
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Configuring CinePlex Studio to trac
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emove progressively larger features
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The illustration below is taken aft
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Configuring CinePlex Studio to trac
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2 In the Video window a square area
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If Pure Colors is not selected, the
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Increase the threshold to reduce th
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2.10 Operating CinePlex Studio with
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To verify CinePlex Studio data acqu
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3 In the Control View, click Connec
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2.10.1.1 Control View VTViewer disp
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2.10.1.3 VTViewer Options The Optio
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2.11 CinePlex Studio Offline Mode 2
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• Sequences Pane(s) (if behavior
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2.13 CinePlex Studio Test Mode Test
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2.14 Operation with the Quad MAP Co
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6 Connect a push button switch (09-
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Version 3.0 111
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15 On each CPX, launch and arm CPX.
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2.15 Using the Extractor This chapt
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illustrates. Note that the Marker 4
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Plexon Inc Chapter 3 CinePlex Studi
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3.2.1 Static Configuration Pane The
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3.2.1.2.1 Camera Group. The Camera
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• Brightness - this setting speci
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3.2.1.3 Tracking Tabs One of three
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3.2.1.4.1 Object Contour Tracker Gr
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• Object Transparency - This sett
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• Cent. Grav. Size - This setting
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• Mrk1Threshold, Mrk2Threshold, M
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3.2.2 Dynamic Configuration Pane Th
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• Subtract shapes - - this button
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• Add zone to selected sequence -
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• Delete selected tracking event
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3.2.2.4.1 Toolbar. The toolbar cont
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Note: The effects of the Image Qual
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— Name - this value depends on wh
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3.3 Menus The CinePlex Studio File
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3.3.3 DVR Menu 3.3.3.1 Arm Clicking
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3.4 Toolbars The File, DVR and Trac
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ow,time,x1,y1,x2,y2,x3,y3,x4,y4,x5,
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3.6.3 Source Settings The Source se
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Plexon Inc Chapter 4 Using CinePlex
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4.1.3 Changing and Saving Project F
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4.2.2 Setting Up a New Project This
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4.2.3 Understanding the CinePlex Ed
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4.2.4 Defining a New Marker This pr
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Markers window in the Name column a
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3 In the Format area, accept the de
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4.4 Customizing the User Interface
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In the Input window, select an inpu
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Page 193 and 194: 4.5.3 Editing Markers and Marker Oc
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Page 197 and 198: 3 Select entries in the Marker 1 an
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Page 203 and 204: Finding marker occurrences with a b
Page 205 and 206: 2 Choose a marker from the Marker l
Page 207 and 208: Interpolating missing occurrences 1
Page 209 and 210: lowing illustration idx indicates t
Page 211 and 212: 6 The user may set the columns for
Page 213 and 214: 4.6 CinePlex Editor How-Tos This se
Page 215 and 216: However, do not expand the range so
Page 217 and 218: name and click Export! The Export C
Page 219 and 220: 7 Repeat Step 6 until all the coord
Page 221 and 222: Plexon Inc Chapter 5 CinePlex Edito
Page 223 and 224: 5.2 Main Window This section descri
Page 225 and 226: Show Complete Tail feature is usefu
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Page 229 and 230: — By pressing the PAGE UP or PAGE
Page 231 and 232: • Automatically Adjust Label Area
Page 233 and 234: Note: — Type - In the Type area,
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Page 237 and 238: Note: By default, if the Show check
Page 239 and 240: — Data Type: - This item contains
Page 241: 5.2.8.1 Function The Messages windo
Page 245 and 246: • Reset Automatic Range Adjustmen
Page 247 and 248: 5.3 Menus Menus provide access to C
Page 249 and 250: — Video Data Input File (AVI) - T
Page 251 and 252: After verifying that the correct fi
Page 253 and 254: • Which Markers - The default val
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Page 257 and 258: 5.3.2 Edit Menu The following illus
Page 259 and 260: Note: The Edit Marker dialog box ma
Page 261 and 262: • Marker - This box shows the mar
Page 263 and 264: 5.3.4.7 Step Forward This button ad
Page 265 and 266: 5.3.6 Find Menu The following illus
Page 267 and 268: • Generate Selected - This button
Page 269 and 270: • Generate All - This button gene
Page 271 and 272: — Zone Interval • Operation to
Page 273 and 274: 5.3.7.5 Snap-To Marker Occurrences
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Page 277 and 278: 5.3.7.8.1 General Tab. • Initial
Page 279 and 280: 5.3.7.8.3 Latency Correction Tab. F
Page 281 and 282: 5.3.7.8.5 Audio Tab. • Available
Page 283 and 284: — Background - This is the backgr
Page 285 and 286: 5.4 Toolbars CinePlex Editor includ
Page 287 and 288: 5.5 How CinePlex Editor Creates Ini
Page 289 and 290: then load a neural data file that c
Page 291 and 292: Marker Type Abbr Information Stored
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From the Marker Occurrences window
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Note that applying this correction
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Snap-To Marker Occurrences tool des
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5.10 Analyzing CinePlex Studio data
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Plexon Inc Appendix A Installation
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Procedure for MAP/CPX Computer Hard
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A.2 Installation - Software This se
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 The following window appears twi
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14 Click Next on the window below.
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18 The CinePlex installation has no
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3 The End User License Agreement wi
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7 The Select Program Manager Group
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11 Next, the Sentinel Key Drivers a
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15 Click Finish on the window below
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2 The Welcome window appears. Press
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6 The Select Components window appe
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10 Nothing else will be installed,
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3 After step 6 continue the procedu
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Note: to remote upgrades. If a remo
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Plexon Inc Appendix B Problem Resol
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toggle switch above these connector
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the CinePlex software will be requi
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1 Remove the TIM card and check tha
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1 Stop running all unnecessary appl
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B.3 CinePlex Studio Messages The ta
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Table 1: CinePlex Studio Simple Mes
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Table 2: CinePlex Studio Critical M
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Plexon Inc Appendix C Lens Selectio
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C.2 Lens Selection For CinePlex Ver
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C.3 Experiment Design C.3.1 Field o
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The formula to calculate the optimu
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3 Three Arm Phenolic Knob (small) -
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• A local professional camera or
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a Place the sandwich plate on the o
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7 The tripod adaptor should already
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Port 1 Port 2 Port 1 Port 2 Port 3
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3 Using the Plexon camera mounting
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Plexon Inc Appendix D Plexon User I
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D.2 Screen Elements D.2.1 Menus The
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D.2.2 Toolbars Each toolbar has a d
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• Close Button - The Close button
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— Hidden Windows - Docked windows
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D.3 Standard Menu Items and Dialogs
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D.3.2 Run Menu The purpose of the R
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— Licensing - Clicking the Licens
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D.3.4 Messages Window The Messages
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D.4 Customization Although the menu
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• Category - This is a list of al
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• Buttons - The toolbar buttons a
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Plexon Inc Appendix E Cabling Guide
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E.2 Typical MAP/CPX Cabling Diagram
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E.3 Typical MAP/CPX System Cabling
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E.3.2 MAP/CPX System with Two Video
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E.4 MAP/CPX Cable Images Version 3.
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E.5.2.2 With CHUB Version 3.0 E-11
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E.5.3.2 Two Video Cameras Version 3
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* CinePlex, Plexon, and the Plexon
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CinePlex v3 Manual - Plexon Inc

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