LabChip GX/GXII User Manual

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Data Analysis 82Printing Workspace InformationChoosing File Print opens the Print Window to select theinformation to print from the open workspace. If the workspacecontains multiple collections, information from the active (selected)collection is printed.The header of each printout contains the workspace name, thecollection name, and the page number. The Footer of each printoutcontains the LabChip GX software version, the date that theworkspace was modified, and the print date.The following information can be printed for the open workspace:• Print All• Gel• Electropherogram• Overlay Electropherogram• Well Table• Peak TableSee below for descriptions of each option.Print AllThis option prints the results of the assay in all of the availableformats. The page layout depends on the options selected in PrintSettings.GelChoosing this option prints a gel image with the lanes marked bythe sample name.Figure 32. Printed GelP/N 127170 Rev. 00 LabChip GX User Manual Caliper Life Sciences, Inc.
Data Analysis 83ElectropherogramChoosing this option prints an individual electropherogram of eachof the selected wells.Overlay ElectropherogramFigure 33. Printed ElectropherogramChoosing this option prints one graph with the electropherogramsfor all of the selected wells overlaid onto a single graph.Figure 34. Printed Overlay ElectropherogramP/N 127170 Rev. 00 LabChip GX User Manual Caliper Life Sciences, Inc.
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LabChipGX/GX IIUser ManualCopyright
Page 3 and 4:
Preface 3For support in Europe cont
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Preface 5Table 1. Important Symbols
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Instrument Safety 7Required Trainin
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Instrument Safety 9Laser SafetyWARN
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Instrument Safety 11InternationalAl
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Table of Contents 13Viewing the EFs
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Table of Contents 15Login Window...
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Introduction 17IntroductionThis man
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Introduction 19Principles of Operat
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Operation 21OperationThis section i
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Operation 23Running an AssayTo star
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Operation 25Running an Assay (Conti
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Operation 27Monitoring the RunThe f
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Operation 29Continuing a Stopped Ru
Page 31 and 32: Operation 31Saving Data Files (Cont
Page 33 and 34: Operation 33Adding a New Plate (Con
Page 35 and 36: Data Analysis 35Data AnalysisAfter
Page 37 and 38: Data Analysis 37How the Software An
Page 51 and 52: Data Analysis 51Opening a Data File
Page 53 and 54: Data Analysis 53Selecting the Wells
Page 55 and 56: Data Analysis 55To import the sampl
Page 57 and 58: Data Analysis 57Using Expected Frag
Page 59 and 60: Data Analysis 59Forcing Expected Pe
Page 61 and 62: Data Analysis 61Viewing the EFs/EPs
Page 63 and 64: Data Analysis 63Changing the Peak F
Page 65 and 66: Data Analysis 65Merging Two PeaksIf
Page 67 and 68: Data Analysis 67Using the Default L
Page 69 and 70: Data Analysis 69Upper and Lower Mar
Page 71 and 72: Data Analysis 71Lower Marker Peaks
Page 73 and 74: Data Analysis 73Viewing GelsTo comp
Page 75 and 76: Data Analysis 75Adjust Pane WidthsT
Page 77 and 78: Data Analysis 77Viewing Graphs in t
Page 79 and 80: Data Analysis 79Viewing Multiple Pr
Page 81: Data Analysis 81Reanalyzing a Data
Page 85 and 86: Data Analysis 85Peak TableChoosing
Page 87 and 88: Data Analysis 87Raw DataASCII text
Page 89 and 90: Data Analysis 89Exporting Data Manu
Page 91 and 92: Software Security 91• “Backing
Page 93 and 94: Software Security 93Managing User A
Page 95 and 96: Software Security 95Changing User I
Page 97 and 98: Software Security 97Changing Access
Page 99 and 100: Software Security 99Setting Policie
Page 101 and 102: Software Security 101Electronic Sig
Page 103 and 104: Software Security 103Audit TrailLab
Page 105 and 106: Software Security 105Exporting the
Page 107 and 108: Software Security 107Creating New D
Page 109 and 110: Software Security 109Remote CDR Ser
Page 111 and 112: Software Security 111Backing Up Dat
Page 113 and 114: Software Reference 113Software Refe
Page 115 and 116: Software Reference 115Menu BarThe m
Page 117 and 118: Software Reference 117Collection Me
Page 119 and 120: Software Reference 119Security Menu
Page 121 and 122: Software Reference 121Chip Status a
Page 123 and 124: Software Reference 123Error Message
Page 125 and 126: Software Reference 125Rename Plate
Page 127 and 128: Software Reference 127Collection Pa
Page 129 and 130: Software Reference 129Graph View (C
Page 131 and 132: Software Reference 131Active Data T
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Software Reference 133Electropherog
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Software Reference 135OptionText Or
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Software Reference 137Gel View (Con
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Software Reference 139Gel View Prop
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Software Reference 141Peak Table Vi
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Software Reference 147Filter ViewTh
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Software Reference 149Filter View (
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Software Reference 151Add New Expec
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Software Reference 153Assay Analysi
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Software Reference 155Alignment Tab
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Software Reference 157Analysis Tab
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Software Reference 159Peak Find Tab
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Software Reference 161Table 2. Well
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Software Reference 163Expected Frag
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Software Reference 165Excluded Peak
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Software Reference 167Smear Analysi
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Software Reference 169Titer Tab (Co
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Software Reference 171Advanced TabU
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Software Reference 173Audit Trail W
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Software Reference 175Audit Trail M
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Software Reference 177DeleteButtonH
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Software Reference 179CDR Utility W
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Software Reference 181Change Passwo
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Software Reference 183Event Viewer
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Software Reference 185Export Window
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Software Reference 187Installation
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Software Reference 189Login WindowU
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Software Reference 191Perform Signa
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Software Reference 193Print WindowU
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Software Reference 195Print Validat
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Software Reference 197Run File Edit
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Software Reference 199Sample Name E
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Software Reference 201Save Workspac
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Software Reference 203Start Run Win
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Software Reference 205Run Tab (Cont
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Software Reference 207Output Tab (C
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Software Reference 209Advanced Tab
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Software Reference 211System Diagno
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Software Reference 213User Administ
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Software Reference 215Edit UsersUse
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Software Reference 217De/Activate U
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Software Reference 219Show/Hide in
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LabChip GX Instrument Description 2
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Maintenance and Service 231Maintena
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Troubleshooting and Diagnostics 233
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Glossary of Terms 247Glossary of Te
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Glossary of Terms 249CLAThe file ex
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Glossary of Terms 251Data Filtering
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Glossary of Terms 253GXD FilesThe f
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Glossary of Terms 255Figure 115. Sl
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Glossary of Terms 257Ladder Analysi
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Glossary of Terms 259Peak BaselineA
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Glossary of Terms 261Polynomial Ord
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Glossary of Terms 263For the purpos
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Glossary of Terms 265SmearSpecifies
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Glossary of Terms 267Figure 120. Pr
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Glossary of Terms 269WorkspaceZero
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Caliper Life Sciences, Inc. Product
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Caliper Life Sciences, Inc. Softwar
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Index 275IndexNumerics21 CFR Part 1
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Index 277showing. . . . . . . . . .
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Index 279clearing default ladder .
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Index 281Remote CDR Server . . . .
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Index 283Waste wells . . . . . . .
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