Colletotrichum: complex species or species ... - CBS - KNAW

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Weir et al.Table 1. A list of strains used in this study.Species Culture* Host Country GenBank accession numberITS GAPDH CAL ACT CHS-1 GS SOD2 TUB2C. aenigma ICMP 18608* Persea americana Israel JX010244 JX010044 JX009683 JX009443 JX009774 JX010078 JX010311 JX010389ICMP 18686 Pyrus pyrifolia Japan JX010243 JX009913 JX009684 JX009519 JX009789 JX010079 JX010312 JX010390C. aeschynomenes ICMP 17673*, ATCC 201874 Aeschynomene virginica USA JX010176 JX009930 JX009721 JX009483 JX009799 JX010081 JX010314 JX010392C. alatae CBS 304.67*, ICMP 17919 Dioscorea alata India JX010190 JX009990 JX009738 JX009471 JX009837 JX010065 JX010305 JX010383ICMP 18122 Dioscorea alata Nigeria JX010191 JX010011 JX009739 JX009470 JX009846 JX010136 JX010371 JX010449C. alienum IMI 313842, ICMP 18691 Persea americana Australia JX010217 JX010018 JX009664 JX009580 JX009754 JX010074 JX010307 JX010385ICMP 18703 Persea americana New Zealand JX010252 JX010030 JX009656 JX009528 JX009885ICMP 12071* Malus domestica New Zealand JX010251 JX010028 JX009654 JX009572 JX009882 JX010101 JX010333 JX010411ICMP 17972 Diospyros kaki New Zealand JX010247 JX009944 JX009655 JX009497 JX009750ICMP 18704 Persea americana New Zealand JX010253 JX010045 JX009658 JX009456 JX009886ICMP 18621 Persea americana New Zealand JX010246 JX009959 JX009657 JX009552 JX009755 JX010075 JX010308 JX010386ICMP 12068 Malus domestica New Zealand JX010255 JX009925 JX009660 JX009492 JX009889ICMP 18725 Malus domestica New Zealand JX010254 JX009943 JX009659 JX009530 JX009887C. aotearoa ICMP 18532 Vitex lucens New Zealand JX010220 JX009906 JX009614 JX009544 JX009764 JX010108 JX010338 JX010421ICMP 18734 Agathis australis New Zealand JX010211 JX010004 JX009627 JX009569 JX009878ICMP 18528 Berberis glaucocarpa New Zealand JX010199 JX009977 JX009615 JX009527 JX009879ICMP 17324 Kunzea ericoides New Zealand JX010198 JX009991 JX009619 JX009538 JX009770 JX010109 JX010344 JX010418ICMP 18533 Prumnopitys ferruginea New Zealand JX010197 JX010026 JX009624 JX009522 JX009769 JX010110 JX010340 JX010416ICMP 18535 Dacrycarpus dacrydioides New Zealand JX010201 JX009968 JX009617 JX009545 JX009766 JX010107 JX010364 JX010423ICMP 18577 Coprosma sp. New Zealand JX010203 JX009978 JX009612 JX009567 JX009851 JX010111 JX010360 JX010417ICMP 18529 Acmena smithii New Zealand JX010222 JX009956 JX009618 JX009539 JX009883ICMP 18537* Coprosma sp. New Zealand JX010205 JX010005 JX009611 JX009564 JX009853 JX010113 JX010345 JX010420ICMP 18536 Coprosma sp. New Zealand JX010204 JX009907 JX009610 JX009577 JX009852ICMP 18748 Ligustrum lucidum New Zealand JX010209 JX009918 JX009613 JX009453 JX009858ICMP 17326 Podocarpus totara New Zealand JX010202 JX010049 JX009616 JX009578 JX009768 JX010106 JX010341 JX010422ICMP 18540 Geniostoma ligustrifolium New Zealand JX010207 JX010043 JX009622 JX009514 JX009855ICMP 18541 Coprosma sp. New Zealand JX010208 JX009960 JX009607 JX009513 JX009856ICMP 18742 Meryta sinclairii New Zealand JX010210 JX010025 JX009626 JX009477 JX009862ICMP 18740 Dysoxylum spectabile New Zealand JX010218 JX009988 JX009625 JX009517 JX009763 JX010135 JX010368 JX010446ICMP 18530 Vitex lucens New Zealand JX010268 JX009911 JX009623 JX009521 JX009884 JX010112 JX010339 JX010419ICMP 18735 Hedychium gardnerianum New Zealand JX010221 JX010023 JX009620 JX009500 JX009880 JX010115 JX010343 JX010424118
The Colletotrichum gloeosporioides species complexTable 1. (Continued).Species Culture* Host Country GenBank accession numberITS GAPDH CAL ACT CHS-1 GS SOD2 TUB2ICMP 18736 Lonicera japonica New Zealand JX010200 JX009912 JX009608 JX009454 JX009894ICMP 18548 Coprosma sp. New Zealand JX010206 JX009961 JX009609 JX009854 JX009445 JX010114 JX010342 JX010425ICMP 18543 Melicytus ramiflorus New Zealand JX010156 JX009983 JX009621 JX009524 JX009859C. asianum IMI 313839, ICMP 18696 Mangifera indica Australia JX010192 JX009915 JX009723 JX009576 JX009753 JX010073 JX010306 JX010384MAFF 306627, ICMP 18603 Mangifera indica Philippines JX010195 JX009938 JX009725 JX009579 JX009825HKUCC 10862, ICMP 18605 Mangifera indica Thailand JX010194 JX010021 JX009726 JX009465 JX009787ICMP 18580*, CBS 130418 Coffea arabica Thailand FJ972612 JX010053 FJ917506 JX009584 JX009867 JX010096 JX010328 JX010406CBS 124960, ICMP 18648 Mangifera indica Panama JX010193 JX010017 JX009724 JX009546 JX009871C. boninense MAFF 305972*, ICMP 17904,CBS 123755Crinum asiaticum var.sinicumJapan JX010292 JX009905 JX009583 JX009827C. clidemiae ICMP 18706 Vitis sp. USA JX010274 JX009909 JX009639 JX009476 JX009777 JX010128 JX010353 JX010439ICMP 18658* Clidemia hirta USA, Hawaii JX010265 JX009989 JX009645 JX009537 JX009877 JX010129 JX010356 JX010438C. cordylinicola MFLUCC 090551*, ICMP 18579 Cordyline fruticosa Thailand JX010226 JX009975 HM470238 HM470235 JX009864 JX010122 JX010361 JX010440C. fructicola ICMP 12568 Persea americana Australia JX010166 JX009946 JX009680 JX009529 JX009762ICMP 17787 Malus domestica Brazil JX010164 JX009958 JX009667 JX009439 JX009807ICMP 17788 Malus domestica Brazil JX010177 JX009949 JX009672 JX009458 JX009808IMI 345051, ICMP 17819 Fragaria × ananassa Canada JX010180 JX009997 JX009668 JX009469 JX009820ICMP 18613 Limonium sinuatum Israel JX010167 JX009998 JX009675 JX009491 JX009772 JX010077 JX010310 JX010388ICMP 18698 Limonium sp. Israel JX010168 JX010052 JX009677 JX009585 JX009773ICMP 18667 Limonium sp. Israel JX010169 JX009951 JX009679 JX009464 JX009775ICMP 18615 Limonium sp. Israel JX010170 JX010016 JX009678 JX009511 JX009776ICMP 18610 Pyrus pyrifolia Japan JX010174 JX010034 JX009681 JX009526 JX009788ICMP 18120 Dioscorea alata Nigeria JX010182 JX010041 JX009670 JX009436 JX009844 JX010091 JX010323 JX010401CBS 125395, ICMP 18645 Theobroma cacao Panama JX010172 JX009992 JX009666 JX009543 JX009873 JX010098 JX010330 JX010408ICMP 18581*, CBS 130416 Coffea arabica Thailand JX010165 JX010033 FJ917508 FJ907426 JX009866 JX010095 JX010327 JX010405ICMP 18727 Fragaria × ananassa USA JX010179 JX010035 JX009682 JX009565 JX009812 JX010083 JX010316 JX010394CBS 120005, ICMP 18609 Fragaria × ananassa USA JX010175 JX009926 JX009673 JX009534 JX009792ICMP 17789 Malus domestica USA JX010178 JX009914 JX009665 JX009451 JX009809ICMP 18125 Dioscorea alata Nigeria JX010183 JX010009 JX009669 JX009468 JX009847C. fructicola (syn. C. ignotum) CBS 125397(*), ICMP 18646 Tetragastris panamensis Panama JX010173 JX010032 JX009674 JX009581 JX009874 JX010099 JX010331 JX010409C. fructicola (syn. Glomerella cingulata var. CBS 238.49(*), ICMP 17921 Ficus edulis Germany JX010181 JX009923 JX009671 JX009495 JX009839 JX010090 JX010322 JX010400minor)www.studiesinmycology.org119
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Studies in Mycology 73 (September 2
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Colletotrichum: complex species or
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Damm et al.Table 1. Strains of Coll
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Damm et al.Table 1. (Continued).Gen
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Damm et al.combined sequence datase
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Damm et al.Fig. 2. Colletotrichum a
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The Colletotrichum boninense specie
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available online at www.studiesinmy
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The Colletotrichum acutatum species
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Weir et al.Fig. 33. Colletotrichum
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Weir et al.Table 4. Performance of
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Weir et al.Simmonds JH (1968). Type
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Cannon et al.182
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Cannon et al.In rare instances, Col
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Cannon et al.Table 1. Summary of pr
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Cannon et al.Table 1. (Continued).P
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Cannon et al.Table 2. Colletotrichu
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Cannon et al.as did those for Colle
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Cannon et al.Table 3. Authentic seq
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Cannon et al.Table 3. (Continued).S
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Cannon et al.110.74 C. cuscutae IMI
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Cannon et al.Boninense cladeThe bon
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Cannon et al.C. lindemuthianum AB08
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Cannon et al.A further important ac
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Cannon et al.Hawksworth DL (2011).
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Cannon et al.Rodríguez-Guerra R, R
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Studies in MycologyStudies in Mycol
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CBS Biodiversity SeriesNo. 11:Taxon
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Studies in Mycology (ISSN 0166-0616
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