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ISQ User Guide - Write Frame of Mind

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4 Creating a Method<br />

• The Filament On column is used to turn the filament on and <strong>of</strong>f in the selected<br />

segment. Turning <strong>of</strong>f the filament increases the lifetime <strong>of</strong> the filament and keeps<br />

the ion source clean longer. However, no data will be collected. Use this column<br />

if you had analytes eluting before the solvent peak. You can create a segment to<br />

turn <strong>of</strong>f the filament during the solvent peak to preserve the filament.<br />

• The Emission Current column is used to set the emission current used during<br />

the acquisition. For optimal analytical performance and stability, use the<br />

emission current at which the system was tuned. However, if you want to use a<br />

different emission current, deselect the Use Tune File Emission Current<br />

checkbox and enter a value in the Emission Current (μA) column. A high<br />

emission current will lead to the production <strong>of</strong> more ions, but the interaction <strong>of</strong><br />

too many ions in the source can cause a degradation in the resolution and signal.<br />

• The Use Last Tuned Detector Gain column is used to indicate that you want to<br />

use the detector gain set in <strong>ISQ</strong> Autotune. If you do not need to use the gain set in<br />

<strong>ISQ</strong> Autotune, then you can set the gain manually. Higher gains give larger<br />

signals, but may shorten the lifetime <strong>of</strong> the detector when concentrated samples<br />

are detected.<br />

• The CI Gas Flow column is used to set the flow rate <strong>of</strong> your reagent gas.<br />

• The Cal Gas column is used to turn on the calibration gas during a run. This<br />

setting can be useful when confirming that the system is generating ions and<br />

correctly storing the data to disk. Typically, the setting is <strong>of</strong>f, but you can let a<br />

low level <strong>of</strong> calibration gas into the source by selecting EI. If you have a dual-flow<br />

calibration gas module, you can select CI for a high level <strong>of</strong> gas.<br />

Thermo Scientific <strong>ISQ</strong> <strong>User</strong> <strong>Guide</strong> 39

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