134heterotrimeric, Rrp4- and Csl4-conta<strong>in</strong><strong>in</strong>g caps<strong>in</strong> vivo. Furthermore, weobserved <strong>in</strong>creased amounts of soluble, Rrp4-conta<strong>in</strong><strong>in</strong>g exosome <strong>in</strong> thestationary phase, when the vast majority of the DnaG-Csl4-exosomerema<strong>in</strong>s non-soluble. Our data strongly suggest that temporal and spatialchanges <strong>in</strong> the localization of the exosome are based on changes <strong>in</strong> thecomposition of the RNA-b<strong>in</strong>d<strong>in</strong>g cap and its <strong>in</strong>teraction with DnaG.1. Evguenieva-Hackenberg, E., Walter, P., Hochleitner, E., Lottspeich, F., Klug, G. (2003) An exosome-likecomplex <strong>in</strong>Sulfolobus solfataricus.EMBOreports4: 889-893.2. Evguenieva-Hackenberg, E. and Klug, G. (2009) RNA degradation <strong>in</strong> Archaea and Gram-negativebacteria different fromEscherichia coli.Progress <strong>in</strong> Molecular Biology and Translational Science85: 275-317.3. Roppelt, V., Klug, G., Evguenieva-Hackenberg, E. (2010) The evolutionarily conserved subunits Rrp4and Csl4 confer different substrate specificities to the archaeal exosome.FEBS Lett.584: 2931-2936.4. Walter, P., Kle<strong>in</strong>, F., Lorentzen, E., Ilchmann, A,. Klug, G., Evguenieva-Hackenberg, E. (2006).Characterisation of native and reconstituted exosome complexes from the hyperthermophilicarchaeonSulfolobus solfataricus.Mol. Microbiol.62: 1076-1089.5. Roppelt, V., Hobel, C., Albers, S. V., Lassek, C., Schwarz, H., Klug, G., Evguenieva-Hackenberg, E.(2010) The archaeal exosome localizes to the membrane.FEBS Lett.584:2791-2795.OTV016Freshwater Act<strong>in</strong>obacteria acI as revealed by s<strong>in</strong>gle-cellgenomicsS.L. Garcia* 1 , A. Srivastava 2 , H.-P. Grossart 2 , T. McMahon 3 , R. Stepanauskas 4 ,A. Sczyrba 5,6 , T. Woyke 5 , S. Barchmann 1 , F. Warnecke 11 Friedrich Schiller University, Jena School for Microbial Communication,Jena, Germany2 Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Department forLimnology Of Stratified Lakes, Neuglobsow, Germany3 University of Wiscons<strong>in</strong> – Madison, Department of Civil & EnvironmentalEng<strong>in</strong>eer<strong>in</strong>g, Madison, United States4 Bigelow Laboratory for Ocean Sciences, S<strong>in</strong>gle Cell Genomics Center, WestBoothbay Harbor, United States5 DOE Jo<strong>in</strong>t Genome Institute, Microbial Program, Creek, United States6 University of Bielefeld, Department for Computational Metagenomics,Bielefeld, United StatesAct<strong>in</strong>obacteria of the acI clade are often numerically dom<strong>in</strong>at<strong>in</strong>gfreshwater ecosystems where they can contribute >50% of the bacteria <strong>in</strong>the surface water. However and as often with environmentally importantspecies they are uncultured to date. That is why we set out to study theirgenomic <strong>in</strong>formation <strong>in</strong> order to learn about their physiology andecological niche. We used a s<strong>in</strong>gle cell genomics approach whichconsisted of the follow<strong>in</strong>g steps: (1) s<strong>in</strong>gle cell sort<strong>in</strong>g by Fluorescenceactivatedcell sort<strong>in</strong>g (FACS), (2) whole genome amplification (WGA)us<strong>in</strong>g Phi29 DNA polymerase, (3) screen<strong>in</strong>g of SAG (S<strong>in</strong>gle cell amplifiedgenome) DNA by 16S rRNA sequenc<strong>in</strong>g, (4) shotgun genomic sequenc<strong>in</strong>gfollowed by (5) genome assembly, annotation and data analysis us<strong>in</strong>g TheJo<strong>in</strong>t Genome Institute’s (JGI) Integrated Microbial Genomes (IMG)analysis platform. We obta<strong>in</strong>ed a draft genomic sequence <strong>in</strong> 75 largercontigs (sum = 1.16 Mbp) and with an unusual low genomic G+C mol%(i.e. ~42%). S<strong>in</strong>gle copy gene analysis suggests an almost completegenome recovery. We also noticed a rather low percentage of genes withno predicted functions (i.e. ~15%) as compared to other cultured andgenome-sequenced microbial species. Our metabolic reconstruction h<strong>in</strong>tsat the degradation of pentoses (e.g. xylose) <strong>in</strong>stead of hexoses. We alsofound an act<strong>in</strong>orhodops<strong>in</strong> gene that may contribute to energy conservationunder unfavorable conditions. This project reveals the possibilities andlimitations of s<strong>in</strong>gle cell genomics for microbial species that defycultivation to date.OTV017Carbon and hydrogen isotope fractionation dur<strong>in</strong>g nitritedependentanaerobic methane oxidation by MethylomirabilisoxyferaO. Rasigraf* 1 , C. Vogt 2 , H.-H. Richnow 2 , M.S.M. Jetten 1 , K.F. Ettwig 11 Radboud Universiteit Nijmegen, Microbiology, Nijmegen, Netherlands2 Helmholtz Centre for Environmental Research – UFZ, IsotopeBiogeochemistry, Leipzig, GermanyAnaerobic oxidation of methane coupled to nitrite reduction is a recentlydiscovered methane s<strong>in</strong>k of as yet unknown global significance. Thebacteria that have been identified to carry out this process, CandidatusMethylomirabilis oxyfera, oxidize methane via the known aerobic pathway<strong>in</strong>volv<strong>in</strong>g the monooxygenase reaction [1]. In contrast to aerobicmethanotrophs, oxygen is produced <strong>in</strong>tracellularly and used for theactivation of methane by a phylogenetically dist<strong>in</strong>ct particulate methanemonooxygenase (pMMO) [1]. Here we report the fractionation factors forcarbon and hydrogen dur<strong>in</strong>g methane degradation by an enrichment cultureof M. oxyfera bacteria. In two separate batch <strong>in</strong>cubation experiments withdifferent absolute biomass and methane contents, the specificmethanotrophic activity was similar and the progressive isotopeenrichment identical. The enrichment factors determ<strong>in</strong>ed by Rayleighapproach were <strong>in</strong> the upper range of values reported so far for aerobicmethanotrophs. In addition, two-dimensional specific isotope analysis ( =( H -1 -1)/( C -1 -1)) was performed and also the determ<strong>in</strong>ed value waswith<strong>in</strong> the range determ<strong>in</strong>ed for other aerobic and anaerobicmethanotrophs. The results showed that <strong>in</strong> contrast to abiotic processesbiological methane oxidation exhibits a narrow range of fractionationfactors for carbon and hydrogen irrespective of the underly<strong>in</strong>g biochemicalmechanisms. In contrast to aerobic proteobacterial methanotrophs, M.oxyfera does not assimilate its cell carbon from methane. Instead, only theCalv<strong>in</strong>-Benson-Bassham cycle of autotrophic carbon dioxide fixation wasshown to be complete <strong>in</strong> the genome, as well as transcribed and expressed[2]. Further experiments are conducted <strong>in</strong> order to experimentally validatethe proposed <strong>in</strong>corporation of carbon dioxide <strong>in</strong>to cell biomass.[1] Ettwig et al. (2010) Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature 464, 543-548.[2] Wu et al. (2011) A new <strong>in</strong>tra-aerobic metabolism <strong>in</strong> the nitrite-dependent anaerobic methane-oxidiz<strong>in</strong>gbacterium Candidatus 'Methylomirabilis oxyfera'. Biochemical Society Transactions 39, 243-248.OTV018Characterization of Novel Bacterial Alcohol DehydrogenasesCapable of Oxydiz<strong>in</strong>g 1,3-propanediolS. Elleuche*, B. Klippel, G. AntranikianTechnische Universität Hamburg-Harburg, Technische Mikrobiologie,Hamburg, Germany1,3-propanediole (1,3-PD) is a valuable compound for textile fiber, filmand plastic <strong>in</strong>dustry. It is chemically produced from acrole<strong>in</strong> or ethyleneoxide via 3-hydroxypropionaldehyde (3-HPA). S<strong>in</strong>ce the chemicalproduction of 1,3-PD is expensive and goes along with the formation oftoxic side products, much effort has been taken to establish amicrobiological production system. Facultative anaerobic microorganismshave been <strong>in</strong>vestigated with regard to their capability to produce 1,3-PDfrom glycerol. In a 2-step reaction, glycerol is converted to 3-HPA and thelatter is f<strong>in</strong>ally reduced to 1,3-PD by a 1,3-propanediol oxidoreductase(PDOR). The second reaction has been shown to be catalyzed by nonspecificalcohol dehydrogenases (ADH) as well. S<strong>in</strong>ce only a few PDORhave been <strong>in</strong>vestigated <strong>in</strong> detail, an approach to identify and characterizeADH with novel properties for the production of 1,3-PD has beenestablished. BLAST searches were performed us<strong>in</strong>g the sequences ofPDOR and related ADH with known activity towards 3-HPA or 1,3-PDfrom species of the genera Citrobacter, Clostridium, Klebsiella, andEscherichia coli. Putative homologues were identified <strong>in</strong> the genome ofthe bacterial species Oenococcus oeni, Dickeya zeae, Pectobacteriumatrosepticum, Pelobacter carb<strong>in</strong>olicus and from sequenced metagenomesderived from uncultivated bacteria liv<strong>in</strong>g <strong>in</strong> deep sea-sediments. A total of10 different open read<strong>in</strong>g frames were cloned <strong>in</strong>to pQE30 expressionvectors and were purified after heterologous production <strong>in</strong> E. coli. Resultson the evolutionary relationships and biochemical properties of theenzymes will be presented.OTV019Bacterial CYP153 monooxygenases as biocatalysts for thesynthesis of -hydroxy fatty acidsS. Honda*, D. Scheps, L. Kühnel, B. Nestl, B. HauerUniversität Stuttgart, Institut für Technische Biochemie, Stuttgart,Germany-Hydroxy fatty acids (-OHFAs) and ,-dicarboxylic acids (,-DCAs) are multifunctional compounds useful for the production ofpolymers, lubricants, cosmetics and pharmaceuticals. Recently, mediumtolong-cha<strong>in</strong> saturated -OHFAs have attracted considerable attention fortheir use as precursors of poly(-hydroxy fatty acids) [1]. These polymersexhibit similar or even superior physicochemical properties compared topolyethylene and other bioplastics. Long-cha<strong>in</strong> cis-monounsaturated -OHFAs and ,-DCAs are also valuable because they yield polymers thatcan be cross-l<strong>in</strong>ked or chemically modified at their double bond sites [2].Cytochrome P450 monooxygenases (CYPs) are enzymes that usemolecular oxygen to <strong>in</strong>sert one oxygen atom <strong>in</strong>to non-activatedhydrocarbons. Dur<strong>in</strong>g the last two decades several eukaryotic CYPs havebeen isolated and eng<strong>in</strong>eered for the yeast-based production of -OHFAsand ,-DCAs [3]. Bacterial CYP153A enzymes are soluble alkane -hydroxylases [4] whose activity towards fatty acids has not been reportedyet. As certa<strong>in</strong> CYP153A convert primary alcohols to ,-diols [5,6], wepresumed they -hydroxylated fatty acids as well.We functionally expressed CYP153A from Polaromonas sp.,Mycobacterium mar<strong>in</strong>um and Mar<strong>in</strong>obacter aquaeolei <strong>in</strong> E. coli to<strong>in</strong>vestigate their <strong>in</strong> vitro fatty acid oxidation profiles. Here we demonstratefor the first time that CYP153A enzymes oxidize fatty acids to -OHFAsand, sometimes, further to ,-DCAs. CYP153A from M. aquaeolei wasidentified as a fatty acid -hydroxylase with a broad substrate range. Thisbiocatalyst produced -OHFAs from medium-cha<strong>in</strong> saturated and longcha<strong>in</strong>cis/trans-monounsaturated fatty acids with 64 - 93% conversion and>95% -regioselectivity. Our study gives further <strong>in</strong>sight <strong>in</strong>to thephysiology of -oxidiz<strong>in</strong>g bacteria and provides the basis for thedevelopment of a recomb<strong>in</strong>ant E. coli system to synthesize -OHFAs fromrenewable feedstocks.We acknowledge f<strong>in</strong>ancial support from the German Federal M<strong>in</strong>istry ofEducation and Research (BMBF) <strong>in</strong> the frame of the “Systems Biology <strong>in</strong>Pseudomonas for Industrial Biocatalysis” project as well as the EuropeanBIOspektrum | Tagungsband <strong>2012</strong>
135Union’s 7 th Framework Programme FP7/2007-2013 under grant agreementN° 266025.[1] Liu, C. et al. (2011): Biomacromolecules 12: 3291-3298[2] Yang, Y.X. et al. (2010): Biomacromolecules 11: 259-268[3] Craft, D.L. et al. (2003): Appl Environ Microbiol 69: 5983-5991[4] van Beilen, J.B. et al. (2006): Appl Environ Microbiol 72: 59-65[5] Fujii, T. et al. (2006): Biosci Biotechnol Biochem 70: 1379-1385[6] Scheps, D. et al. (2011): Org Biomol Chem 9: 6727-6733OTV020Us<strong>in</strong>g yeast and fungi to produce electricity- Towards a self-regenerat<strong>in</strong>g enzymatic biofuel cell cathodeS. Sané* 1 , S. Rubenwolf 1 , C. Jolivalt 2 , S. Kerzenmacher 11 University Freiburg, MEMS application, Freiburg, Germany2 Chimie ParisTech, Paris, FranceBiofuel cells (BFCs) directly transform chemical energy <strong>in</strong>to electricity foras long as fuel and oxidant are supplied. To catalyze the electrode reaction<strong>in</strong> biofuel cells, for <strong>in</strong>stance biochemical pathways of completemicroorganisms or enzymatic biocatalysts can be used [1].The aim of our research is to improve the long-term stability of efficient,but currently short-lived enzymatic biofuel cell electrodes [2]. We aim tocont<strong>in</strong>ually supply catalytically-active enzymes at the electrode us<strong>in</strong>gliv<strong>in</strong>g microorganisms that grow <strong>in</strong> an electrode-<strong>in</strong>tegrated microbioreactor.In the present work, we demonstrate the feasibility of us<strong>in</strong>g the crudeculture supernatant of the fungus Trametes versicolor and the recomb<strong>in</strong>antyeast Yarrowia lipolytica [3] to supply the biocatalyst laccase to a biofuelcell cathode. Both T. versicolor and Y. lipolytica were grown <strong>in</strong> a syntheticdeficient (SD) medium. At approximately the highest enzyme activity,which was 3.6 U/ml for T. versicolor and 0.02 U/ml for Y. lipolytica,culture supernatant was transferred <strong>in</strong>to a biofuel cell cathodecompartment [4]. To record the loadcurve, current was <strong>in</strong>crementally<strong>in</strong>creased (steps of 5.6 A/(cm 2 *h)) and the cathode potential wasmeasured aga<strong>in</strong>st a saturated calomel electrode (SCE). At a cathodepotential of 0.4 V vs. SCE, we obta<strong>in</strong>ed a current density of 134 A/cm 2for T. versicolor. The same enzyme activity of commercial T. versicolorlaccase (Sigma) <strong>in</strong> SD medium yielded a current density of only 75A/cm 2 and <strong>in</strong> citrate buffer a current density of 87 A/cm 2 . For Y.lipolytica, a current density of 4 A/cm 2 was measured. The same amountof purified laccase from Y. lipolytica <strong>in</strong> SD medium and <strong>in</strong> citrate bufferresulted <strong>in</strong> a current density of 8 A/cm 2 and 12 A/cm 2 respectively.Our results are a first step towards construct<strong>in</strong>g a self-regenerat<strong>in</strong>genzymatic biofuel cell with extended lifetime. Furthermore, we haveshown that the choice of microorganism, has an <strong>in</strong>fluence on the obta<strong>in</strong>edcurrent density, because it has a large <strong>in</strong>fluence on the composition of theculture supernatant as well as on laccase activity. Important topics forfuture work will be the clarification of the secreted byproducts and the<strong>in</strong>tegration of the laccase-produc<strong>in</strong>g microorganisms <strong>in</strong> the electrodecompartment.[1] R.A. Bullen et al., Biosens. Bioelectron., (2006), pp. 2015-2045[2] S. Rubenwolf et al., Appl. Microbiol. Biotechnol., (2011), pp. 1315-132[3] C. Jolivalt et al.,Appl Microbiol Biotechnol., (2005) pp. 450-456[4] A. Kloke et al., Biosens. Bioelectron. (2010), pp. 2559-2565OTV021Biofilms - a new Chapter <strong>in</strong> BiocatalysisK. Bühler*, R. Karande, B. Halan, A. SchmidTU Dortmund, BCI / Biotechnik, Dortmund, GermanyIn biocatalysis, the traditional bottlenecks like low biocatalyst stability,toxicity problems, and difficulties <strong>in</strong> runn<strong>in</strong>g cont<strong>in</strong>uous processes are stillprevail<strong>in</strong>g. A most promis<strong>in</strong>g approach to counteract such shortfalls is theexploitation of biofilms for produc<strong>in</strong>g <strong>in</strong>dustrially relevant compounds.Biofilm formation is a common feature of microbes. Under certa<strong>in</strong>conditions, they attach to various k<strong>in</strong>ds of surfaces and form a sort ofsessile community at aqueous solid <strong>in</strong>terfaces [1] . Advantages of biofilmgrow<strong>in</strong>g organisms as compared to their planktonic counterparts are theirphysical robustness, the ability to self-immobilize, and their long-termstability. In the recent years, we developed a number of different biofilmreactors and characterized the biofilm catalyst under reaction conditions.In this presentation, we will <strong>in</strong>troduce three different biofilm reactorconcepts and po<strong>in</strong>t out advantages and disadvantages. The basicconfiguration of a membrane attached biofilm reactor (MABR) turned outto be severely oxygen limited and difficult to scale up [2] . This shortcom<strong>in</strong>gwas circumvented by <strong>in</strong>troduc<strong>in</strong>g a dual purpose ceramic membrane <strong>in</strong>tothe reactor system, which simultaneously served as growth surface for thebiocatalyst and as aeration device [3] . This system is currently underevaluation for scale up.In a novel approach, we comb<strong>in</strong>ed a capillary three phase (aqueousorganic-gas)segmented-flow reactor with catalytic biofilms [4] . Based onthe <strong>in</strong>ternal shear forces with<strong>in</strong> such micro-capillary reactor systems, thisset-up takes advantage of high mass transfer rates. In addition, these shearforces prevent the system from clogg<strong>in</strong>g and control the biofilm thickness.We will present data regard<strong>in</strong>g the conversions of octane and styrene tooctanol and (S)-styrene oxide, respectively, <strong>in</strong> these different set-ups anddiscuss the pros and cons of these approaches for biofilm based catalysis.[1] Rosche, B. et al., 2009, Trends <strong>in</strong> Biotechnol.27: p. 636-43.[2] Gross, R. et al., 2010, Biotechnol Bioeng.105: p. 705-17[3] Halan, B. et al., 2010, Biotechnol Bioeng,106: p. 516-27[4] Schmid A., et al. 2011, PCT/EP2011/057724, FiledOTV022Growth-decoupled, anaerobic succ<strong>in</strong>ate production fromglycerol with pyruvate-k<strong>in</strong>ase deficient E. coli mutantsS. Söllner* 1 , M. Rahnert 2 , M. Siemann-Herzberg 2 , R. Takors 2 , J. Altenbuchner 11 Institut für Industrielle Genetik, Universität Stuttgart, Stuttgart, Germany2 Institute of Biochemical Eng<strong>in</strong>eer<strong>in</strong>g, University of Stuttgart, Stuttgart,GermanyWe constructed E. coli stra<strong>in</strong>s for succ<strong>in</strong>ate production from glycerol by arational comb<strong>in</strong>ation of gene deletions and a concomitant evolutionarydesign. Based on elementary mode calculations the formation of 1 molsucc<strong>in</strong>ate from 1 mol glycerol with simultaneous fixation of 1 mol of CO 2represents the theoretical maximum yield. This can be realized if succ<strong>in</strong>ateis exclusively formed by PEP carboxylation followed by the reductivebranch of the tricarboxylic acid cycle. Therefore the genes pykF and pykA,both encod<strong>in</strong>g pyruvate k<strong>in</strong>ases, were deleted. Otherwise, the pyruvatek<strong>in</strong>ases would catalyze the direct conversion of PEP <strong>in</strong>to pyruvate. Theresult<strong>in</strong>g stra<strong>in</strong>s could, however, barely grow on glycerol, presumablycaused by a certa<strong>in</strong> pyruvate shortage. Only after a selection procedure forfaster growth, the evolved mutants revealed growth rates <strong>in</strong> the range of0.3 h -1 . In these stra<strong>in</strong>s, pyruvate was most likely formed through a novelpathway. It is proposed to be based on a complete ‘rerout<strong>in</strong>g’ ofmetabolism which <strong>in</strong>cludes the follow<strong>in</strong>g steps: PEP carboxylation tooxaloacetate, conversion of oxaloacetate to malate, and decarboxylation ofmalate to pyruvate, further termed POMP. Evidence for the POMPpathwaycomes from the deleterious effects on growth after furtherdeletion of genes cod<strong>in</strong>g for malic enzymes. The stra<strong>in</strong> ss279 (pykApykF gldA ldhA poxB pflB tdcE) was f<strong>in</strong>ally used <strong>in</strong> a ‘zerogrowthcultivation’ setup (direct biotransformation from glycerol tosucc<strong>in</strong>ate) at a cell concentration of 0.4 g/L (DCW). To implement this, thegeneration of cell mass was aerobically assured, prior to the ultimateproduction phase, s<strong>in</strong>ce E. coli is not able to grow anaerobically onglycerol, as long as a necessary external electron acceptor is absent.Consequently, succ<strong>in</strong>ate was produced from glycerol and carbon dioxide(or bicarbonate) <strong>in</strong> an adjacent anaerobic production phase at non-grow<strong>in</strong>gconditions. At <strong>in</strong>itial lab-scale, we observed cont<strong>in</strong>uous succ<strong>in</strong>ateproduction over a period of 6 days. Here<strong>in</strong>, 58 mM glycerol was consumedand 48 mM succ<strong>in</strong>ate was produced, which corresponded to an averagemolar yield of 82 %. This <strong>in</strong>dicated a net fixation of CO 2 <strong>in</strong> the productionphase, which was further confirmed by stable isotope labell<strong>in</strong>g assays,prov<strong>in</strong>g the <strong>in</strong>corporation of 13 C-labeled bicarbonate <strong>in</strong>to the producedsucc<strong>in</strong>ate.OTV023Gradual <strong>in</strong>sight <strong>in</strong>to Corynebacterium glutamicum`s centralmetabolism for the <strong>in</strong>crease of L-lys<strong>in</strong>e productionJ. van Ooyen*, S. Noack, M. Bott, L. Eggel<strong>in</strong>gForschungszentrum Jülich GmbH, IBG-1: Biotechnologie, Jülich, GermanyCorynebacterium glutamicum is used for the large production of am<strong>in</strong>oacids like L-glutamate, L-val<strong>in</strong>e or L-lys<strong>in</strong>e, the latter made <strong>in</strong> a scale of8x10 5 annual metric tons. We applied a stoichiometric model andidentified citrate synthase (CS) as most promis<strong>in</strong>g target to <strong>in</strong>crease L-lys<strong>in</strong>e production. We therefore replaced the two promoters which weidentified <strong>in</strong> front of the CS gene gltA of a lys<strong>in</strong>e producer by n<strong>in</strong>epromoters of decreas<strong>in</strong>g strength. The result<strong>in</strong>g set of stra<strong>in</strong>s wassubsequently analysed with respect to CS activity, growth, and L-lys<strong>in</strong>eyield. The decrease of CS-activity below 30% led to an <strong>in</strong>crease <strong>in</strong> L-lys<strong>in</strong>e yield accompanied by a decrease <strong>in</strong> growth rate. A reduced CSactivityof 6% produced an <strong>in</strong>crease <strong>in</strong> L-lys<strong>in</strong>e yield from 0.17 g/g to 0.32g/g. As a further step the global consequences at the transcriptome,metabolome, and fluxome level were monitored with<strong>in</strong> the stra<strong>in</strong> series.Reduced CS activity results <strong>in</strong> altered expression of genes controlled byRamA and RamB, and <strong>in</strong>creased cytosolic concentrations of aspartate andaspartate-derived am<strong>in</strong>o acids. The fluxome study revealed that reducedCS-activity surpris<strong>in</strong>gly has only a marg<strong>in</strong>al <strong>in</strong>fluence on CS flux itself,but <strong>in</strong>creases the <strong>in</strong>ternal concentration of its substrates oxaloacetate andacetyl-CoA, thus show<strong>in</strong>g that the observed systemwide macroscopiceffects are due to locally bordered differences.This systemic approach opens an excit<strong>in</strong>g new view on the system C.glutamicum as an excellent and robust producer of bulk compounds andraises new challenges for stoichiometric models applied to the liv<strong>in</strong>g cell.BIOspektrum | Tagungsband <strong>2012</strong>
- Page 5 and 6:
Instruments that are music to your
- Page 7 and 8:
General Information2012 Annual Conf
- Page 9 and 10:
SPONSORS & EXHIBITORS9Sponsoren und
- Page 11 and 12:
11BIOspektrum | Tagungsband 2012
- Page 13 and 14:
13BIOspektrum | Tagungsband 2012
- Page 16:
16 AUS DEN FACHGRUPPEN DER VAAMFach
- Page 20 and 21:
20 AUS DEN FACHGRUPPEN DER VAAMFach
- Page 22 and 23:
22 AUS DEN FACHGRUPPEN DER VAAMMitg
- Page 24 and 25:
24 INSTITUTSPORTRAITin the differen
- Page 26 and 27:
26 INSTITUTSPORTRAITProf. Dr. Lutz
- Page 28 and 29:
28 CONFERENCE PROGRAMME | OVERVIEWS
- Page 30 and 31:
30 CONFERENCE PROGRAMME | OVERVIEWT
- Page 32 and 33:
32 CONFERENCE PROGRAMMECONFERENCE P
- Page 34 and 35:
34 CONFERENCE PROGRAMMECONFERENCE P
- Page 36 and 37:
36 SPECIAL GROUPSACTIVITIES OF THE
- Page 38 and 39:
38 SPECIAL GROUPSACTIVITIES OF THE
- Page 40 and 41:
40 SPECIAL GROUPSACTIVITIES OF THE
- Page 42 and 43:
42 SHORT LECTURESMonday, March 19,
- Page 44 and 45:
44 SHORT LECTURESMonday, March 19,
- Page 46 and 47:
46 SHORT LECTURESTuesday, March 20,
- Page 48 and 49:
48 SHORT LECTURESWednesday, March 2
- Page 50 and 51:
50 SHORT LECTURESWednesday, March 2
- Page 52 and 53:
52ISV01Die verborgene Welt der Bakt
- Page 54 and 55:
54protein is reversibly uridylylate
- Page 56 and 57:
56that this trapping depends on the
- Page 58 and 59:
58Here, multiple parameters were an
- Page 60 and 61:
60BDP016The paryphoplasm of Plancto
- Page 62 and 63:
62of A-PG was found responsible for
- Page 64 and 65:
64CEV012Synthetic analysis of the a
- Page 66 and 67:
66CEP004Investigation on the subcel
- Page 68 and 69:
68CEP013Role of RodA in Staphylococ
- Page 70 and 71:
70MurNAc-L-Ala-D-Glu-LL-Dap-D-Ala-D
- Page 72 and 73:
72CEP032Yeast mitochondria as a mod
- Page 74 and 75:
74as health problem due to the alle
- Page 76 and 77:
76[3]. In summary, hypoxia has a st
- Page 78 and 79:
78This different behavior challenge
- Page 80 and 81:
80FUP008Asc1p’s role in MAP-kinas
- Page 82 and 83:
82FUP018FbFP as an Oxygen-Independe
- Page 84 and 85: 84defence enzymes, were found to be
- Page 86 and 87: 86DNA was extracted and shotgun seq
- Page 88 and 89: 88laboratory conditions the non-car
- Page 90 and 91: 90MEV003Biosynthesis of class III l
- Page 92 and 93: 92provide an insight into the regul
- Page 94 and 95: 94MEP007Identification and toxigeni
- Page 96 and 97: 96various carotenoids instead of de
- Page 98 and 99: 98MEP025Regulation of pristinamycin
- Page 100 and 101: 100that the genes for AOH polyketid
- Page 102 and 103: 102Knoll, C., du Toit, M., Schnell,
- Page 104 and 105: 104pathogenicity of NDM- and non-ND
- Page 106 and 107: 106MPV013Bartonella henselae adhesi
- Page 108 and 109: 108Yfi regulatory system. YfiBNR is
- Page 110 and 111: 110identification of Staphylococcus
- Page 112 and 113: 112that a unit increase in water te
- Page 114 and 115: 114MPP020Induction of the NF-kb sig
- Page 116 and 117: 116[3] Liu, C. et al., 2010. Adhesi
- Page 118 and 119: 118virulence provides novel targets
- Page 120 and 121: 120proteins are excreted. On the co
- Page 122 and 123: 122MPP054BopC is a type III secreti
- Page 124 and 125: 124MPP062Invasiveness of Salmonella
- Page 126 and 127: 126Finally, selected strains were c
- Page 128 and 129: 128interactions. Taken together, ou
- Page 130 and 131: 130forS. Typhimurium. Uncovering th
- Page 132 and 133: 132understand the exact role of Fla
- Page 136 and 137: 136OTV024Induction of systemic resi
- Page 138 and 139: 13816S rRNA genes was applied to ac
- Page 140 and 141: 140membrane permeability of 390Lh -
- Page 142 and 143: 142bacteria in situ, we used 16S rR
- Page 144 and 145: 144bacteria were resistant to acid,
- Page 146 and 147: 1461. Ye, L.D., Schilhabel, A., Bar
- Page 148 and 149: 148using real-time PCR. Activity me
- Page 150 and 151: 150When Ms. mazei pWM321-p1687-uidA
- Page 152 and 153: 152OTP065The role of GvpM in gas ve
- Page 154 and 155: 154OTP074Comparison of Faecal Cultu
- Page 156 and 157: 156OTP084The Use of GFP-GvpE fusion
- Page 158 and 159: 158compared to 20 ºC. An increase
- Page 160 and 161: 160characterised this plasmid in de
- Page 162 and 163: 162Streptomyces sp. strain FLA show
- Page 164 and 165: 164The study results indicated that
- Page 166 and 167: 166have shown direct evidences, for
- Page 168 and 169: 168biosurfactant. The putative lipo
- Page 170 and 171: 170the absence of legally mandated
- Page 172 and 173: 172where lowest concentrations were
- Page 174 and 175: 174PSV008Physiological effects of d
- Page 176 and 177: 176of pH i in vivo using the pH sen
- Page 178 and 179: 178PSP010Crystal structure of the e
- Page 180 and 181: 180PSP018Screening for genes of Sta
- Page 182 and 183: 182In order to overproduce all enzy
- Page 184 and 185:
184substrate specific expression of
- Page 186 and 187:
186potential active site region. We
- Page 188 and 189:
188PSP054Elucidation of the tetrach
- Page 190 and 191:
190family, but only one of these, t
- Page 192 and 193:
192network stabilizes the reactive
- Page 194 and 195:
194conditions tested. Its 2D struct
- Page 196 and 197:
196down of RSs2430 influences the e
- Page 198 and 199:
198demonstrating its suitability as
- Page 200 and 201:
200RSP025The pH-responsive transcri
- Page 202 and 203:
202attracted the attention of molec
- Page 204 and 205:
204A (CoA)-thioester intermediates.
- Page 206 and 207:
206Ser46~P complex. Additionally, B
- Page 208 and 209:
208threat to the health of reefs wo
- Page 210 and 211:
210their ectosymbionts to varying s
- Page 212 and 213:
212SMV008Methanol Consumption by Me
- Page 214 and 215:
214determined as a function of the
- Page 216 and 217:
216Funding by BMWi (AiF project no.
- Page 218 and 219:
218broad distribution in nature, oc
- Page 220 and 221:
220SMP027Contrasting assimilators o
- Page 222 and 223:
222growing all over the North, Cent
- Page 224 and 225:
224SMP044RNase J and RNase E in Sin
- Page 226 and 227:
226labelled hydrocarbons or potenti
- Page 228 and 229:
228SSV009Mathematical modelling of
- Page 230 and 231:
230SSP006Initial proteome analysis
- Page 232 and 233:
232nine putative PHB depolymerases
- Page 234 and 235:
234[1991]. We were able to demonstr
- Page 236 and 237:
236of these proteins are putative m
- Page 238 and 239:
238YEV2-FGMechanistic insight into
- Page 240 and 241:
240 AUTORENAbdel-Mageed, W.Achstett
- Page 242 and 243:
242 AUTORENFarajkhah, H.HMP002Faral
- Page 244 and 245:
244 AUTORENJung, Kr.Jung, P.Junge,
- Page 246:
246 AUTORENNajafi, F.MEP007Naji, S.
- Page 249 and 250:
249van Dijk, G.van Engelen, E.van H
- Page 251 and 252:
251Eckhard Boles von der Universit
- Page 253 and 254:
253Anna-Katharina Wagner: Regulatio
- Page 255 and 256:
255Vera Bockemühl: Produktioneiner
- Page 257 and 258:
257Meike Ammon: Analyse der subzell
- Page 259 and 260:
springer-spektrum.deDas große neue