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VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

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231feed<strong>in</strong>g with contam<strong>in</strong>ated powdered <strong>in</strong>fant formula (PIF) [1]. PIFtherefore is strictly recommended to be “sakazakii-free” which is def<strong>in</strong>edas the absence of any colony form<strong>in</strong>g unit <strong>in</strong> 30 samples of 10g of PIF [2].Recent studies e.g. [3] noticed a cross-resistance of Cronobacter stra<strong>in</strong>spo<strong>in</strong>t<strong>in</strong>g to common regulation mechanisms for cop<strong>in</strong>g with heat and dryresistance which both play a key role <strong>in</strong> the production of PIF.Investigat<strong>in</strong>g these mechanisms, we are go<strong>in</strong>g to develop a modifiedproduction process <strong>in</strong> cooperation with the Food Process Eng<strong>in</strong>eer<strong>in</strong>gsection of our <strong>in</strong>stitute and the Milchwerke “Mittelelbe” GmbH, an<strong>in</strong>dustrial producer of PIF.[1] Friedemann M (2008), Bundesgesundheitsbl Gesundheitsforsch Gesundheitsschutz 51, 664[2] Besse NG, Leclercq A, Maladen V (2006), J AOAC Int 89, 1309[3] Dancer GI, Mah JH, Rhee MS, Hwang IG, Kang DH (2009), J. Appl. Microbiol. 107, 1606SSP011Characterization of Staphylococcus aureus persister cells upondaptomyc<strong>in</strong> treatmentS. Lechner* 1 , W. Eisenreich 2 , I. Maldener 3 , A. Herbig 4 , K. Nieselt 4 , R. Bertram 11 Universität Tüb<strong>in</strong>gen/IMIT, Mikrobielle Genetik, Tüb<strong>in</strong>gen, Germany2 Technische Universität München/Chemie, Biochemie, Garch<strong>in</strong>g, Germany3 Universität Tüb<strong>in</strong>gen/IMIT, Organismische Interaktionen, Tüb<strong>in</strong>gen, Germany4 Universität Tüb<strong>in</strong>gen/ZBIT, Integrative Transkriptomik, Tüb<strong>in</strong>gen, GermanyBacterial cultures conta<strong>in</strong> a subpopulation of dormant cells, persisters.These non-grow<strong>in</strong>g cells are phenotypic variants of the wild type that aretolerant but not resistant to antibiotics. As persistence is a transientphenotype it is <strong>in</strong>herently difficult to study the molecular mechanismsassociated with this k<strong>in</strong>d of bacterial dormancy.Growth phase, stra<strong>in</strong> background, and genotype are critical for theformation of Staphylococcus aureus persister cells. Accord<strong>in</strong>g to ourresults, S. aureus cells <strong>in</strong> stationary growth phase are generally lessvulnerable by antibiotics than exponential cultures presumably due toelevated persister levels. We previously identified parameters for theselection of S. aureus persister cells. Biphasic kill<strong>in</strong>g k<strong>in</strong>etics, highly<strong>in</strong>dicative of persisters, were observed by exponential-phase cells treatedwith 10- and 100-fold MIC of tobramyc<strong>in</strong> and ciprofloxac<strong>in</strong>, respectively.Under stationary growth phase cells challenged with 100-fold MIC ofdaptomyc<strong>in</strong> showed an <strong>in</strong>itial reduction of viable cell counts with<strong>in</strong> thefirst hour (99.98%) followed by a plateau of surviv<strong>in</strong>g cells with a ratherslowly decrease <strong>in</strong> the amount of CFUs. S. aureus SA113 stationary-phasepersisters selected by daptomyc<strong>in</strong> treatment are currently be<strong>in</strong>g analyzedfor alterations <strong>in</strong> transcriptional and metabolic patterns by microarray and13 C isotopologue profil<strong>in</strong>g, and <strong>in</strong> morphology via transmission electronmicroscopy.The new f<strong>in</strong>d<strong>in</strong>gs may aid <strong>in</strong> reveal<strong>in</strong>g persister genes <strong>in</strong> S. aureus as wellas <strong>in</strong> decipher<strong>in</strong>g physiologic and cellular states of S. aureus persisters.SSP012The <strong>in</strong>fluence of supercritical CO 2 on sulphate reduc<strong>in</strong>g andmethanogenic enrichment cultures from hydrocarbon reservoirs<strong>in</strong> GermanyJ. Frerichs* 1,2 , C. Gniese 3 , C. Ostertag-Henn<strong>in</strong>g 1 , M. Krüger 11 Bundesanstalt für Geowissenschaften und Rohstoffe, Geochemie derRohstoffe, Hannover, Germany2 BGR-Hannover Geomikrobiologie, Germany3 TU Bergakademie Freiberg, Institut für Biowissenschaften, Freiberg, GermanyLarge-scale solutions are needed to reduce the emissions of greenhousegases such as CO 2 or CH 4 <strong>in</strong> consequence of their global warm<strong>in</strong>gpotential. Carbon capture and storage (CCS) offers one option for reduc<strong>in</strong>gsuch emissions with the storage of CO 2 with<strong>in</strong> depleted gas and oil fields.Our study is focus<strong>in</strong>g on the direct <strong>in</strong>fluence of high CO 2 concentrationson the autochthonous microbial population and environmental parametersat such sites.The reservoir with<strong>in</strong> the Schneeren-Husum formation was <strong>in</strong>vestigated forits chemical properties, activity profile and microbial communitycomposition via T-RFLP, clone libaries and quantitative-PCR (qPCR).Even with<strong>in</strong> one reservoir differences between two well heads wereobserved <strong>in</strong> the <strong>in</strong>ducible activity after substrate addition. Also qPCRanalysis showed two dist<strong>in</strong>ct communities with vary<strong>in</strong>g copy numbers ofseveral bacterial and archaeal genes (16S rRNA, dsrA, mcrA etc.).Pyrosequenc<strong>in</strong>g data gave <strong>in</strong>sights <strong>in</strong>to the reservoir community <strong>in</strong> a directcomparison of produced well head fluids and deep reservoir samples(down hole sampl<strong>in</strong>g).High CO 2 had a negative effect on methane and sulphide production <strong>in</strong>experiments conducted with amended orig<strong>in</strong>al fluids and enrichmentcultures. In a second step orig<strong>in</strong>al fluids (amended with substrate) from thereservoir were <strong>in</strong>cubated for several weeks under near <strong>in</strong> situ temperature(~50°C) with supercritical CO 2 (100 bar). In this experiment the viabilityof microorganisms together with community changes were <strong>in</strong>vestigatedus<strong>in</strong>g quantitative PCR, DGGE and CARD-FISH. In conclusion thisexperiment provides <strong>in</strong>formation on possible microbiological changes <strong>in</strong>the reservoir dur<strong>in</strong>g and after storage of CO 2.SSP013Biogenesis of PHB granules <strong>in</strong> Ralstonia eutropha H16 and <strong>in</strong>mutants with overexpressed or deleted PhaM and PhaP5 prote<strong>in</strong>sA. Wahl* 1 , N. Schuth 1 , S. Nußberger 2 , D. Pfeiffer 1 , D. Jendrossek 11 Universität Stuttgart, Institut für Mikrobiologie, Stuttgart, Germany2 Universität Stuttgart, Biologisches Institut - Abteilung Biophysik,Stuttgart, GermanyPoly(3-hydroxybutyrate), PHB, is the most commonpolyhydroxyalkanoate and is important for many bacterial species as acarbon and energy source dur<strong>in</strong>g times of starvation. Prior to this work, atwo-hybrid approach was applied to screen for uncharacterized prote<strong>in</strong>swith the ability to <strong>in</strong>teract with PHB synthase (PhaC1) and other PHBrelatedprote<strong>in</strong>s of R. eutropha. As a result, two new prote<strong>in</strong>s - PhaM andPhaP5 - were identified that are <strong>in</strong>volved <strong>in</strong> biosynthesis of PHB. Bothprote<strong>in</strong>s showed <strong>in</strong>teractions with other PHB-associated prote<strong>in</strong>s and witheach other and colocalized with PHB granules <strong>in</strong> vivo (as fusion with eYfp).A phaM mutant accumulated only one or two large PHB granules <strong>in</strong>steadof several medium-sized PHB granules of the wild type, and distribution ofgranules to daughter cells was disordered. This phenotype was reversibleby substitution of phaM <strong>in</strong> trans. When PhaM was constitutivelyoverexpressed the cells formed many small PHB granules that wereassociated with the cell pole-fac<strong>in</strong>g side of the nucleoid region. PurifiedPhaM revealed strong but sequence-<strong>in</strong>dependent DNA-b<strong>in</strong>d<strong>in</strong>g ability <strong>in</strong>EMSA experiments <strong>in</strong> vitro.A phaP5 mutant showed no significant effect on size and localization ofaccumulated PHB granules. However, when PhaP5 was constitutivelyoverexpressed, cells formed smaller PHB granules than the wild type andthe granules were organized <strong>in</strong> tight bundles always associated to both cellpoles. This phenotype is similar to that of a phaP1-4 mutant. Inconclusion, PhaM and PhaP5 determ<strong>in</strong>e number, surface to volume ratio,subcellular localization and distribution to daughter cells of PHB granules<strong>in</strong> R. eutropha H16. Subcellular localization of PHB granules <strong>in</strong> R.eutropha depends on a concerted expression of at least three PHB-granuleassociatedprote<strong>in</strong>s, namely PhaM, PhaP5 and PHB synthase PhaC1.SSP014Kill<strong>in</strong>g of Biothreat agents on metallic copper surfacesP. Bleichert* 1 , C. Espirito Santo 1,2 , G. Grass 11 Bundeswehr Institute of Microbiology, Department of Medical BiologicalSpecial Diagnostics and High Security, Munich, Germany2 Universidade de Coimbra, Departamento de Ciências da Vida e Insititutodo Mar (IMAR), Coimbra, PortugalCurrently there is an <strong>in</strong>creas<strong>in</strong>g <strong>in</strong>terest <strong>in</strong> metallic copper (Cu) surfacesdue to their antimicrobial properties. Us<strong>in</strong>g surfaces that might dim<strong>in</strong>ishsurface related contam<strong>in</strong>ation is of great <strong>in</strong>terest <strong>in</strong> order to improvehygiene. Dry Cu surfaces demonstrated that at both laboratory conditionsand hospital trials a wide variety of microorganisms get <strong>in</strong>activated. Themechanism by which microbes are killed by dry Cu surfaces is still notfully understood. Nonetheless, a microbe faced with Cu surfaces, is rapidly<strong>in</strong>activated with<strong>in</strong> m<strong>in</strong>utes by a quick and high copper uptake. Bacterialspecies able to evade the host immune system are among the most seriouslethal microbial challenges to human health. This group of pathogenscomprises biothreat species classified by the Center for Disease andControl and Prevention (CDC) as bacterial select agents with the potentialto be misused as bioterroristic weapons.We <strong>in</strong>vestigated the kill<strong>in</strong>g effectiveness of Cu surfaces aga<strong>in</strong>st Gramnegativebacteria that cause high morbidity and mortally rates <strong>in</strong> humans(Brucella melitensis, Burkholderia mallei, Burkholderia pseudomallei,Francisella tularensis and Yers<strong>in</strong>ia pestis). The pathogens’ <strong>in</strong>activationk<strong>in</strong>etics validates efficient and rapid <strong>in</strong>activation on dry Cu surfaces. Ascontrol surface we used sta<strong>in</strong>less steel that is known not to beantimicrobial. Furthermore we tested the ability of Cu surfaces to affectthe membrane-<strong>in</strong>tegrity of bacteria after different Cu-exposition times withso called LIVE/DEAD ® sta<strong>in</strong><strong>in</strong>g. By this technique we demonstrated thatCu surfaces damage the membranes of Gram-negative bacteria.These results can be expected to help re<strong>in</strong>forc<strong>in</strong>g the idea of apply<strong>in</strong>g Cusurfaces, for improv<strong>in</strong>g hygiene and to aid <strong>in</strong> the war aga<strong>in</strong>st nosocomialandother <strong>in</strong>fections.SSP015Unravell<strong>in</strong>g the function of multiple PHB depolymerases <strong>in</strong> R.eutrophaA. Sznajder*, D. Leuprecht, D. JendrossekUniversität Stuttgart, Inst. f. Mikrobiologie, Stuttgart, GermanyPoly(3-hydroxybutyrate) (PHB) is a biodegradable thermoplast that isproduced by fermentation of the Gram-negative “Knallgasbakterium”Ralstonia eutropha <strong>in</strong> an <strong>in</strong>dustrial scale ( 50.000t/a). More than a dozenof prote<strong>in</strong>s that are relevant for PHB metabolism have been previouslyidentified. Nevertheless many problems especially <strong>in</strong> understand<strong>in</strong>g theprocesses of <strong>in</strong>tracellular PHB degradation rema<strong>in</strong> unsolved. Up to now,BIOspektrum | Tagungsband <strong>2012</strong>

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