234[1991]. We were able to demonstrate that solute-<strong>in</strong>duced prote<strong>in</strong>stabilization does not always correlate with ribosome stabilization.Furthermore, depend<strong>in</strong>g on the solute, we observed different effects <strong>in</strong>relation to the subunits (30S and 50S) as compared to the fully functional70S ribosome.Gaucher EA, Gov<strong>in</strong>drajan S & Ganesh OK (2008) Nature. 451:704-708Lambert D & Draper DE (2007) J Mol Biol. 370:993-1005Lee J & Kaletunç G (2002) Appl Env Microbiol. 68:5379-5386Mackey BM, Miles CA et al. (1991) J Gen Microbiol. 137:2361-2374SSP025Elucidation of potential vitrificants of Halomonas elongata DSM2581 T with regard to desiccation tolerance and bio-<strong>in</strong>spired use as<strong>in</strong>terface protectantsC. Tanne*, E.A. Gal<strong>in</strong>skiUniversity of Bonn, Institute of Microbiology & Biotechnology, Bonn, GermanyThe loss of water is a general stress phenomenon for life on earth.However, some extremophilic organisms are able to survive almostcomplete desiccation by vitrification, a process termed anhydrobiosis orcryptobiosis. Under these conditions the whole metabolism is arrested andthe cells can rema<strong>in</strong> dormant for a long period of time until they arerehydrated. This survival mechanism preserves macromolecules (e.g.prote<strong>in</strong>s, DNA, membranes) by the formation of biological glasses at thenano-structured <strong>in</strong>terface to the environment. Well-known glass-form<strong>in</strong>gsubstances (sugars and other hydroxyl-group carry<strong>in</strong>g compounds) arebelieved to replace water molecules <strong>in</strong> the hydration shell of biologicalboundaries and thus prevent complete <strong>in</strong>activation by the lack of water.The present work aimed at the identification of such glass-form<strong>in</strong>gcompounds <strong>in</strong> Halomonas elongata and other factors <strong>in</strong>volved <strong>in</strong>vitrification. Molecular candidates are hydroxylated derivatives of ecto<strong>in</strong>e(S,S-beta-hydroxecto<strong>in</strong>e), highly hydrophilic and <strong>in</strong>tr<strong>in</strong>sically unstructuredprote<strong>in</strong>s (so-called hydrophil<strong>in</strong>s), but also <strong>in</strong>organic ions and salts oforganic acids [1-4]. As an experimental approach to elucidate theorganism´s response to a forthcom<strong>in</strong>g dehydration event the exponentiallygrow<strong>in</strong>g culture was exposed to gradually <strong>in</strong>creas<strong>in</strong>g temperature beyondmaximum. In addition, bio<strong>in</strong>formatic data were exploited to predictpotential hydrophil<strong>in</strong>s and to <strong>in</strong>vestigate other characteristics of theHalomonas elongata proteome.It was shown that, besides the expected accumulation of hydroxylatedforms of compatible solutes, H. elongata is also able to express so-calledhydrophil<strong>in</strong>s to support vitrification. In addition, its moderately acidicproteome may provide an additional basis for <strong>in</strong>creased water stresstolerance.Detailed understand<strong>in</strong>g of all factors <strong>in</strong>volved <strong>in</strong> vitrification andpreservation of biological surfaces which depend on water for function and<strong>in</strong>tegrity will ultimately enable us to apply such knowledge for the longtermstabilization of immobilised enzymes and biohybrid <strong>in</strong>terfaces as forexample <strong>in</strong> technical biosensors.[1] J.J. Caramelo, N.D. Iusem. When cells lose water: Lessons from biophysics and molecular biology.Progress <strong>in</strong> Biophysics and Molecular Biology 99(1):1-6. 2009[2] A. Kriško, Z. Smole, G. Debret, N. Nikolic, M. Radman. (2010).Unstructured hydrophilic sequences <strong>in</strong>prokaryotic proteomes correlate with dehydration tolerance and host association. Journal of MolecularBiology 402(5):775-82.[3] J. Buit<strong>in</strong>k, I.J. van den Dries, F.A. Hoekstra, M. Alberda, M.A. Hemm<strong>in</strong>ga (2000). High criticaltemperature above Tg may contribute to the stablity of biological systems. Biophysical Journal 79(2): 1119-1128.[4] U.S. Patent 6,653,062SSP026The CRISPR/Cas system of Haloferax volcanii: requirements forthe defenceS. FischerUniversität Ulm, Biologie II, Ulm, GermanyThe CRISPR/Cas system is a prokaryotic defence system that providesadaptive and heritable immunity aga<strong>in</strong>st foreign genetic elements <strong>in</strong> mostArchaea and many Bacteria. This system is widespread and diverse, but asit was only recently discovered, the precise molecular details for thedefence directed aga<strong>in</strong>st <strong>in</strong>vad<strong>in</strong>g plasmids or viruses are far fromunderstood. Clustered regularly <strong>in</strong>terspaced short pal<strong>in</strong>dromic repeats(CRISPRs) together with CRISPR associated genes (casgenes) build thebasis of the system. The so-called spacer sequences <strong>in</strong> a CRISPR locus arederived from the <strong>in</strong>vad<strong>in</strong>g nucleic acids (protospacer) <strong>in</strong> the adaptationstage, to enable recognition and degradation <strong>in</strong> case of re-<strong>in</strong>fection(<strong>in</strong>terference stage). Furthermore, specific short sequences called PAMs(protospacer adjacent motifs) are essential for the adaptation and<strong>in</strong>terference of most CRISPR/Cas types. We <strong>in</strong>vestigate the mechanisms ofthe CRISPR/Cas-mediated defence <strong>in</strong> the Euryarchaeon Haloferaxvolcanii- an organism for which the orig<strong>in</strong> of spacer sequences rema<strong>in</strong>stotally elusive and thus the role and identity of PAM sequences wasunknown until now. Us<strong>in</strong>g a plasmid assay for which a protospaceridentical to the first spacer of oneH. volcaniiCRISPR locus is comb<strong>in</strong>edwith all potential 2 nt- or 3 nt-PAM sequences, we identified two PAMsequences so far. We further <strong>in</strong>vestigate, to which extent sequence identitybetween spacer and protospacer must be given to ensure a successful<strong>in</strong>terference reaction.SSP027Succession patterns of dist<strong>in</strong>ct flavobacterial groups afterspr<strong>in</strong>g algal blooms <strong>in</strong> the North SeaC. Bennke* 1 , B. Fuchs 1 , A. Kl<strong>in</strong>dworth 2 , F.O. Glöckner 2 , G. Gerdts 3 ,A. Wichels 3 , K. Wiltshire 3 , M. Zeder 1,4 , R. Amann 11 MPI-für Mar<strong>in</strong>e Mikrobiologie, Molekulare Ökologie, Bremen, Germany2 MPI-für Mar<strong>in</strong>e Mikrobiologie, Microbial Genomic Group, Bremen, Germany3 AWI, Mikrobielle Ökologie, Helgoland, Germany4 Technobiology GmbH, Buchra<strong>in</strong>, SwitzerlandAlgae blooms are known to cause significant changes <strong>in</strong> bacterioplanktoncomposition. Dur<strong>in</strong>g and after the algal spr<strong>in</strong>g bloom <strong>in</strong> 2009 a largemicrobial community shift was observed <strong>in</strong> the North Sea. 16S rRNA tagsequenc<strong>in</strong>g at different timepo<strong>in</strong>ts revealed that Alphaproteobacteria andGammaproteobacteria as well as the Bacteroidetes, here <strong>in</strong> particular theclass Flavobacteria, dom<strong>in</strong>ate the bacterioplankton community <strong>in</strong> theNorth Sea at Helgoland Roads. In this study we dissected theflavobacterial response on algal blooms. Specific oligonucleotide probesfor Flavobacteria clades were designed, and these clades were quantifiedby catalyzed reporter deposition-fluorescence <strong>in</strong> situ hybridization(CARD-FISH) and automated microscopy.In spr<strong>in</strong>g 2009 a tight succession of dist<strong>in</strong>ct Flavobacteria clades wasobserved. Members of the genera Ulvibacter and Formosa reached relativeabundances of up to 20% and 24%, respectively, with<strong>in</strong> one to two weeksafter the peak of the algal bloom. These groups seem to respond to specificsubstrates released by the algae after the bloom (bottom-up effect). Later,while Ulvibacter and Formosa subgroups dropped the Polaribacter clade<strong>in</strong>creased up to 27% of the entire microbial community. Interest<strong>in</strong>gly, allanalysed subgroups were present throughout the rest of the year 2009 only<strong>in</strong> low abundances, except for the Polaribacter clade which showedseveral peaks dur<strong>in</strong>g the course of the year <strong>in</strong> response to the summer andautumn algal blooms. All flavobacterial subgroups responded morestrongly to the diatom-dom<strong>in</strong>ated spr<strong>in</strong>g bloom than to the autumn bloomcomposed ma<strong>in</strong>ly of green algae.In 2010 the spr<strong>in</strong>g phytoplankton bloom occurred one month later than <strong>in</strong>2009, but a similar succession of the flavobacterial groups could beobserved reach<strong>in</strong>g similar cell numbers. Our f<strong>in</strong>d<strong>in</strong>gs suggest that the waxand wane of specific bacterioplankton clades might be an annuallyrecurr<strong>in</strong>g phenomenon <strong>in</strong> the North Sea, and therefore rather adeterm<strong>in</strong>istic than stochastic process.SSP028Host- and cell type-specific adhesion of human and animalEscherichia coli <strong>in</strong> association to their virulence-associated genesU. Frömmel* 1 , S. Rödiger 1 , A. Böhm 1 , J. Nitschke 1 , J. We<strong>in</strong>reich 1 , J. Groß 1 ,O. Z<strong>in</strong>ke 2 , H. Ansorge 3 , P. Klemm 4 , W. Lehmen 5 , S. Vogel 6 , T. Wex 7 ,C. Schröder 1 , P. Schierack 11 Hochschule Lausitz (FH) , FB Bio-, Chemie- und Verfahrenstechnik; AGMolekularbiologie, Senftenberg, Germany2 Museum der Westlausitz, Kamenz, Germany3 Senckenberg Museum für Naturkunde, Görlitz, Germany4 Technical University of Denmark, Lyngby, Denmark5 Attomol GmbH, Bronkow, Germany6 Lausitzer Seenland Kl<strong>in</strong>ikum GmbH, Hoyerswerda, Germany7 Otto-von-Guericke Universitiy, Magdeburg, GermanyEscherichia coli (E. coli) is a common bacterium of the <strong>in</strong>test<strong>in</strong>almicroflora of mammals and birds but also can cause <strong>in</strong>test<strong>in</strong>al as well asextra<strong>in</strong>test<strong>in</strong>al disease. Pathogenic E. coli can be grouped <strong>in</strong>to severalpathovars <strong>in</strong>clud<strong>in</strong>g host-specific and zoonotic bacteria.Successful colonization and <strong>in</strong>fection of epithelial cells depend on <strong>in</strong>itialadhesion which is mediated by fimbriae and other adhes<strong>in</strong>s or colonizationfactors. Adhes<strong>in</strong>s promote host- and tissue specificity or enable bacteria tocolonize a broader range of hosts and tissues which are two differentsurvival strategies.We sampled 410 pathogenic and commensal E. coli isolates from humansand 19 mammalian and avian species <strong>in</strong>clud<strong>in</strong>g domestic and wild animalsand <strong>in</strong>clud<strong>in</strong>g isolates from faeces and the ur<strong>in</strong>ary tract.All stra<strong>in</strong>s were tested for hemolysis on blood agar plates and for 42virulence-associated genes (VAGs) <strong>in</strong>clud<strong>in</strong>g several adhes<strong>in</strong>s with aVideoScan Multiplex-PCR-Bead-Assay which was developed <strong>in</strong> ourlaboratory. All non-hemolytic isolates (n= 296) were analyzed foradhesion to four epithelial cell l<strong>in</strong>es (Caco2: human <strong>in</strong>test<strong>in</strong>al, 5637:human ur<strong>in</strong>ary bladder, IPEC-J2: porc<strong>in</strong>e <strong>in</strong>test<strong>in</strong>al, PK15: porc<strong>in</strong>e kidney)automatically with our new developed VideoScan technology. Adhesionpattern were correlated with the presence of VAGs and VAG pattern.In average, hemolytic isolates carried twice as many VAGs compared tonon-hemolytic isolates. Isolates had a species-specific repertoire of VAGs.Adhesion pattern strongly varied between isolates <strong>in</strong>dependent fromspecies orig<strong>in</strong>. Adhesion of bacteria could be divided <strong>in</strong>to non-adherent,BIOspektrum | Tagungsband <strong>2012</strong>
235cell l<strong>in</strong>e-un-specific adherent and cell l<strong>in</strong>e-specific adherent. We def<strong>in</strong>edVAGs (e.g.sfa/foc,malX) which presence was associated with higheradhesion to one specific cell l<strong>in</strong>e and thus host and/or tissue specificity.However, there were no differences <strong>in</strong> adhesion rates between pathogenicand commensal isolates.In conclusion, we show a broad variety of VAG and adhesion pattern <strong>in</strong>human and animal E. coli isolates. Adhesion is host- and cell type-specificenabl<strong>in</strong>g colonization of different microhabitats. There are confirmedadhes<strong>in</strong>s but other hypothetical and yet unknown adhes<strong>in</strong>s and their hostand tissue specificity have to be identified and characterized <strong>in</strong> futurestudies.SSP029A role for glutam<strong>in</strong>e synthetase <strong>in</strong> regulation of prol<strong>in</strong>ebiosynthesisS. Köcher, M. Thompson*, V. MüllerMolecular Microbiology & Bioenergetics, Institute for MolecularBiosciences, Goethe University, Frankfurt/Ma<strong>in</strong>, Germany, GermanyGlutam<strong>in</strong>e and glutamate are the major compatible solutes <strong>in</strong> the moderatehalophile Halobacillus halophilus under moderate sal<strong>in</strong>ities and prol<strong>in</strong>e athigh sal<strong>in</strong>ities (1). One of the isogenes/-enzymes of glutam<strong>in</strong>e synthetase(glnA2) was shown before to be the osmoregulated key player <strong>in</strong> sal<strong>in</strong>itydependentglutam<strong>in</strong>e and glutamate biosynthesis (2). Here, we havedeleted glnA2 from the chromosome of H. halophilus. Growth of themutant was not impaired, neither at low nor at high salt, and the mutant didnot have reduced levels of glutam<strong>in</strong>e or glutamate, <strong>in</strong>dicat<strong>in</strong>g a metabolicbypass for glutam<strong>in</strong>e and gutamate production. Much to our surprise, themutant did no longer produce prol<strong>in</strong>e as compatible solute. The loss ofprol<strong>in</strong>e was compensated for by <strong>in</strong>creased ecto<strong>in</strong>e production. Consistentwith this is the observation that the transcript levels for ectA (and glnA1)were <strong>in</strong>creased <strong>in</strong> the mutant.Our data demonstrate a regulatory role of glutam<strong>in</strong>e synthetase 2 <strong>in</strong> prol<strong>in</strong>ebiosynthesis. Possible regulatory scenarios are discussed.(1) Saum, S.H. & Müller, V., (2008) Regulation of osmoadaption <strong>in</strong> the moderate halophileHalobacillus halophilus: chloride, glutamate and switch<strong>in</strong>g osmolyte stategies. Sal<strong>in</strong>e Systems 4: 4(2) Saum, S.H., Sydow, S.F., Palm, P., Pfeiffer, F., Oesterhelt, D., and Müller, V., (2006)Biochemical and molecular characterization of the biosynthesis of glutam<strong>in</strong>e and glutamate, twomajor compatible solutes <strong>in</strong> the moderately halophilic bacterium Halobacillus halophilus. J.Bacteriol. 188: 6808-6815SSP030The impact of a typical biofilm flora on the VBNC-state ofpathogens <strong>in</strong> dr<strong>in</strong>k<strong>in</strong>g water biofilmsM. Kliefoth*, U. SzewzykTechnische Universität Berl<strong>in</strong>, FG Umweltmikrobiologie, Berl<strong>in</strong>, GermanyPathogens like Legionella pneumophilaand Pseudomonas aerug<strong>in</strong>osa areknown for their ability to persist <strong>in</strong> house <strong>in</strong>stallations and pose a risk of<strong>in</strong>fections for humans. The standard approach for detection is still theheterotrophic plate count. But it is also common, that over 90 % of themicroorganisms <strong>in</strong> such oligothrophic environment are not grow<strong>in</strong>g onknown media.Only a few studies focus on the typical biofilm flora <strong>in</strong> dr<strong>in</strong>k<strong>in</strong>g water,which is shown to be a mixture of ma<strong>in</strong>ly - , - and -subclasses ofProteobacteria. These bacteria can turn <strong>in</strong>to a physiological state called“viable-but-not-culturable” (VBNC), <strong>in</strong> which no growth can be observedon plates. The bacteria show dwarfish cell forms and reduced metabolicactivity.In our <strong>in</strong>vestigations we study how these bacteria have an impact on theentrance or exit of P. aerug<strong>in</strong>osa <strong>in</strong> the VBNC-state. Therefore a biofilmreactor was developed to simulate a low nutrient environment and to<strong>in</strong>duce VBNC <strong>in</strong> P. aerug<strong>in</strong>osa as well as other selected bacteria, whichwere isolated <strong>in</strong> our group from native biofilms.Mono-species biofilms and multi-species biofilms with <strong>in</strong>tegratedpathogens are compared by us<strong>in</strong>g culture- (e.g. CFU) and culture<strong>in</strong>dependentmethods like Live/Dead sta<strong>in</strong><strong>in</strong>g, PAC (a direct- viable-countmethod), qPCR, FISH and CLSM. The aim of this project is to ga<strong>in</strong><strong>in</strong>sights <strong>in</strong> which manner P. aerug<strong>in</strong>osa can persist <strong>in</strong> dr<strong>in</strong>k<strong>in</strong>g waterbiofilms and how native bacteria <strong>in</strong>fluences the resistance of P. aerug<strong>in</strong>osa<strong>in</strong> water plumb<strong>in</strong>g. Furthermore the reproducible <strong>in</strong>duction of VBNC bylow nutrients (carbon, phosphate or trace elements) are be<strong>in</strong>g consideredand <strong>in</strong>vestigated.SSP031The CRISPR-Cas system of Haloferax volcaniiB. Stoll*, J. Brendel, A. MarchfelderUniversity of Ulm, Bio II, Ulm, GermanyThe recently discovered CRISPR-Cas system (CRISPR:clustered regularly<strong>in</strong>terspaced short pal<strong>in</strong>dromic repeats, Cas: CRISPR-associated) is anadaptive and heritable resistance mechanism aga<strong>in</strong>st foreign geneticelements. The CRISPR-Cas system consists of clusters of repetitivechromosomal DNA <strong>in</strong> which short pal<strong>in</strong>dromic DNA repeats are separatedby short spacers, the latter be<strong>in</strong>g sequences derived from the <strong>in</strong>vader. Inaddition, a set of prote<strong>in</strong>s, the Cas prote<strong>in</strong>s, is <strong>in</strong>volved. We are<strong>in</strong>vestigat<strong>in</strong>g the CRISPR-Cas system <strong>in</strong> the halophilic archaeon Haloferaxvolcanii. H. volcanii is an archaeal model organism which requires about2.1 M NaCl for optimal growth and raises the <strong>in</strong>tracellular saltconcentration to similar values to cope with high salt concentration <strong>in</strong> themedium. The genome is sequenced and Haloferax is one of the fewarchaeal organisms where genetic systems are available.H. volcanii has three CRISPR loci, one located on the chromosome andtwo located on one of the chromosomal plasmids. Next to one of theCRISPR loci the Cas prote<strong>in</strong>s are encoded <strong>in</strong> one long multicistronicoperon <strong>in</strong>clud<strong>in</strong>g genes for Cas1-8.We are analys<strong>in</strong>g the expression and process<strong>in</strong>g of the CRISPR RNA. Tothat end we generated a deletion stra<strong>in</strong> for the cas6 gene and <strong>in</strong>vestigatedits effect on CRISPR RNA process<strong>in</strong>g.SSP032Copper impacts the gold toxicity <strong>in</strong> Cupriavidus metalliduransN. Wiesemann* 1 , G. Hause 2 , J. Mohr 3 , F. Reith 4 , C. Große 1 , D.H. Nies 11 Mart<strong>in</strong>-Luther-University, Moleculare Microbiology, Halle (Saale), Germany2 Biocenter of the Mart<strong>in</strong>-Luther-University Halle-Wittenberg, Microscopy Unit,Halle (Saale), Germany3 Hannover Medical School, Hannover, Germany4 University of Adelaide, School of Earth and Environmental Sciences ,Adelaide, AustraliaCupriavidus metallidurans could be responsible for the formation ofbacteriogenic secondary gold nanoparticles 1,2 . We <strong>in</strong>vestigated if geneclusters that are up-regulated after treatment with gold complexes might be<strong>in</strong>volved <strong>in</strong> this process. The megaplasmids of stra<strong>in</strong> CH34, pMOL28 witha chromate and pMOL30 with an extensive copper resistance determ<strong>in</strong>ant,are not required for the formation of colloidal particles visible <strong>in</strong> TEM,which might be gold nanoparticles. A hypothesis that considered a goldtransformation process by the gig (gold <strong>in</strong>duces genes) cluster productsrem<strong>in</strong>iscent to mercury transformation by mer gene products could not beverified. Cells pre-<strong>in</strong>cubated with non toxic concentrations of copperdisplayed <strong>in</strong>creased copper resistance as expected, however, <strong>in</strong> some C.metallidurans stra<strong>in</strong>s, gold resistance decreased <strong>in</strong> parallel to <strong>in</strong>creas<strong>in</strong>gcopper resistance <strong>in</strong> the copper-treated cells. This demonstrated thathandl<strong>in</strong>g of gold ions by some - but not all - prote<strong>in</strong>s <strong>in</strong>volved <strong>in</strong> copperresistance led to enhanced toxicity of gold. Deletion of other genes<strong>in</strong>volved <strong>in</strong> copper resistance led to a simultaneous decrease of copper andgold resistance but not <strong>in</strong> all stra<strong>in</strong>s. All these data demonstrated thatcopper resistance systems <strong>in</strong> C. metallidurans are <strong>in</strong>volved <strong>in</strong>transformation of gold, however, not always to the advantage of the cells.The <strong>in</strong>trigu<strong>in</strong>g network of the copper and gold-handl<strong>in</strong>g factors <strong>in</strong> C.metallidurans is thus very complicated and needs a detailed <strong>in</strong>-depthanalysis.1 Reith, F., B. Etschmann, C. Grosse, H. Moors, M. A. Benotmane, P. Monsieurs, G. Grass, C. Doonan, S.Vogt, B. Lai, G. Mart<strong>in</strong>ez-Criado, G. N. George, D. H. Nies, M. Mergeay, A. Pr<strong>in</strong>g, G. Southam, and J.Brugger. 2009. Mechanisms of gold biom<strong>in</strong>eralization <strong>in</strong> the bacterium Cupriavidus metallidurans. ProcNatl Acad Sci U S A 106:17757-17762.2 Reith, F., S. L. Rogers, D. C. McPhail, and D. Webb. 2006. Biom<strong>in</strong>eralization of gold: biofilms onbacterioform gold. Science 313:233-236.SSP033A comb<strong>in</strong>ed transcriptomic and proteomic <strong>in</strong>vestigation <strong>in</strong>to theosmoregulatory mechanisms of Halomonas elongata DSM 2581 TS. Faßbender 1 , B. Scheffer 2 , D. Oesterhelt 2 , F. Siedler 2 , H.J. Kunte* 11 Federal Institute for Materials Research and Test<strong>in</strong>g (BAM), Materialsand Environment Division, Berl<strong>in</strong>, Germany2 Max Planck Institute of Biochemistry, Department of MembraneBiochemistry, Mart<strong>in</strong>sried, GermanyThe halophilic -proteobacterium Halomonas elongata thrives at a widerange of salt concentrations by accumulat<strong>in</strong>g the compatible solute ecto<strong>in</strong>e.Ecto<strong>in</strong>e can be amassed <strong>in</strong> the cytoplasm either by synthesis or bytransport from the medium. To enable ecto<strong>in</strong>e uptake, H. elongata isequipped with a specific transport system, named TeaABC. TeaABC is notonly required for the accumulation of ecto<strong>in</strong>e, but also functions as asalvage system for ecto<strong>in</strong>e leak<strong>in</strong>g out of the cell. This observation led tothe hypothesis that TeaABC and potential efflux prote<strong>in</strong>(s) might be<strong>in</strong>volved <strong>in</strong> regulat<strong>in</strong>g the cytoplasmic ecto<strong>in</strong>e concentration. In order toidentify membrane prote<strong>in</strong>s <strong>in</strong>volved <strong>in</strong> the efflux of compatible solutesand to ga<strong>in</strong> more <strong>in</strong>formation about the changes <strong>in</strong> the prote<strong>in</strong> compositionof halophiles <strong>in</strong> response to salt stress, we analyzed i) the transcriptomeand ii) the membrane-proteome of H. elongata. By apply<strong>in</strong>g a 15 N isotopemetabolic label<strong>in</strong>g strategy, a total of 135 membrane prote<strong>in</strong>s wereidentified and quantified which are significantly up or down regulated <strong>in</strong>response to changes of the external sal<strong>in</strong>ity. In cells adapted to low saltmedium (100 mM NaCl) the level of 90 prote<strong>in</strong>s has changed significantlycompared to cells adapted to the optimal salt concentration of 1 M NaCl.The content of only 45 prote<strong>in</strong>s was changed when cells were adapted tohigh salt medium of 2 M NaCl compared to cells grown at 1 M NaCl. Themajority of the 135 regulated prote<strong>in</strong>s are putative transport prote<strong>in</strong>s. FourBIOspektrum | Tagungsband <strong>2012</strong>
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Instruments that are music to your
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General Information2012 Annual Conf
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SPONSORS & EXHIBITORS9Sponsoren und
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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22 AUS DEN FACHGRUPPEN DER VAAMMitg
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24 INSTITUTSPORTRAITin the differen
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26 INSTITUTSPORTRAITProf. Dr. Lutz
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28 CONFERENCE PROGRAMME | OVERVIEWS
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30 CONFERENCE PROGRAMME | OVERVIEWT
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32 CONFERENCE PROGRAMMECONFERENCE P
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42 SHORT LECTURESMonday, March 19,
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44 SHORT LECTURESMonday, March 19,
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46 SHORT LECTURESTuesday, March 20,
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48 SHORT LECTURESWednesday, March 2
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50 SHORT LECTURESWednesday, March 2
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52ISV01Die verborgene Welt der Bakt
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54protein is reversibly uridylylate
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56that this trapping depends on the
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58Here, multiple parameters were an
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60BDP016The paryphoplasm of Plancto
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62of A-PG was found responsible for
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64CEV012Synthetic analysis of the a
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66CEP004Investigation on the subcel
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68CEP013Role of RodA in Staphylococ
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70MurNAc-L-Ala-D-Glu-LL-Dap-D-Ala-D
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72CEP032Yeast mitochondria as a mod
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74as health problem due to the alle
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76[3]. In summary, hypoxia has a st
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78This different behavior challenge
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80FUP008Asc1p’s role in MAP-kinas
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82FUP018FbFP as an Oxygen-Independe
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84defence enzymes, were found to be
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86DNA was extracted and shotgun seq
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88laboratory conditions the non-car
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90MEV003Biosynthesis of class III l
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92provide an insight into the regul
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94MEP007Identification and toxigeni
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96various carotenoids instead of de
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98MEP025Regulation of pristinamycin
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100that the genes for AOH polyketid
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102Knoll, C., du Toit, M., Schnell,
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104pathogenicity of NDM- and non-ND
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106MPV013Bartonella henselae adhesi
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108Yfi regulatory system. YfiBNR is
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110identification of Staphylococcus
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112that a unit increase in water te
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114MPP020Induction of the NF-kb sig
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116[3] Liu, C. et al., 2010. Adhesi
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118virulence provides novel targets
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120proteins are excreted. On the co
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122MPP054BopC is a type III secreti
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124MPP062Invasiveness of Salmonella
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126Finally, selected strains were c
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128interactions. Taken together, ou
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130forS. Typhimurium. Uncovering th
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132understand the exact role of Fla
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134heterotrimeric, Rrp4- and Csl4-c
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136OTV024Induction of systemic resi
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13816S rRNA genes was applied to ac
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140membrane permeability of 390Lh -
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142bacteria in situ, we used 16S rR
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144bacteria were resistant to acid,
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1461. Ye, L.D., Schilhabel, A., Bar
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148using real-time PCR. Activity me
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150When Ms. mazei pWM321-p1687-uidA
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152OTP065The role of GvpM in gas ve
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154OTP074Comparison of Faecal Cultu
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156OTP084The Use of GFP-GvpE fusion
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158compared to 20 ºC. An increase
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160characterised this plasmid in de
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162Streptomyces sp. strain FLA show
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164The study results indicated that
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166have shown direct evidences, for
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168biosurfactant. The putative lipo
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170the absence of legally mandated
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172where lowest concentrations were
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174PSV008Physiological effects of d
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176of pH i in vivo using the pH sen
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178PSP010Crystal structure of the e
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180PSP018Screening for genes of Sta
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182In order to overproduce all enzy
- Page 184 and 185: 184substrate specific expression of
- Page 186 and 187: 186potential active site region. We
- Page 188 and 189: 188PSP054Elucidation of the tetrach
- Page 190 and 191: 190family, but only one of these, t
- Page 192 and 193: 192network stabilizes the reactive
- Page 194 and 195: 194conditions tested. Its 2D struct
- Page 196 and 197: 196down of RSs2430 influences the e
- Page 198 and 199: 198demonstrating its suitability as
- Page 200 and 201: 200RSP025The pH-responsive transcri
- Page 202 and 203: 202attracted the attention of molec
- Page 204 and 205: 204A (CoA)-thioester intermediates.
- Page 206 and 207: 206Ser46~P complex. Additionally, B
- Page 208 and 209: 208threat to the health of reefs wo
- Page 210 and 211: 210their ectosymbionts to varying s
- Page 212 and 213: 212SMV008Methanol Consumption by Me
- Page 214 and 215: 214determined as a function of the
- Page 216 and 217: 216Funding by BMWi (AiF project no.
- Page 218 and 219: 218broad distribution in nature, oc
- Page 220 and 221: 220SMP027Contrasting assimilators o
- Page 222 and 223: 222growing all over the North, Cent
- Page 224 and 225: 224SMP044RNase J and RNase E in Sin
- Page 226 and 227: 226labelled hydrocarbons or potenti
- Page 228 and 229: 228SSV009Mathematical modelling of
- Page 230 and 231: 230SSP006Initial proteome analysis
- Page 232 and 233: 232nine putative PHB depolymerases
- Page 236 and 237: 236of these proteins are putative m
- Page 238 and 239: 238YEV2-FGMechanistic insight into
- Page 240 and 241: 240 AUTORENAbdel-Mageed, W.Achstett
- Page 242 and 243: 242 AUTORENFarajkhah, H.HMP002Faral
- Page 244 and 245: 244 AUTORENJung, Kr.Jung, P.Junge,
- Page 246: 246 AUTORENNajafi, F.MEP007Naji, S.
- Page 249 and 250: 249van Dijk, G.van Engelen, E.van H
- Page 251 and 252: 251Eckhard Boles von der Universit
- Page 253 and 254: 253Anna-Katharina Wagner: Regulatio
- Page 255 and 256: 255Vera Bockemühl: Produktioneiner
- Page 257 and 258: 257Meike Ammon: Analyse der subzell
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