98MEP025Regulation of prist<strong>in</strong>amyc<strong>in</strong> biosynthesis <strong>in</strong> S. Prist<strong>in</strong>aespiralisJ. Guezguez*, Y. Mast, E. Sch<strong>in</strong>koIMIT, Microbiology/Biotechnology, Tüb<strong>in</strong>gen, GermanyThe streptogram<strong>in</strong> antibiotic prist<strong>in</strong>amyc<strong>in</strong>, produced by Streptomycesprist<strong>in</strong>aespiralis, is a mixture of two types of chemically unrelatedcompounds: prist<strong>in</strong>amyc<strong>in</strong> PI and PII, which are produced <strong>in</strong> a ratio of30:70. Prist<strong>in</strong>amyc<strong>in</strong> PI is a cyclic hexadepsipeptide, belong<strong>in</strong>g to the B-group of streptogram<strong>in</strong>s, while prist<strong>in</strong>amyc<strong>in</strong> PII has the structure of apolyunsaturated macrolactone of the A-group of streptogram<strong>in</strong>s. Bothcompounds alone <strong>in</strong>hibit the prote<strong>in</strong> biosynthesis by b<strong>in</strong>d<strong>in</strong>g to thepeptidyl transferase doma<strong>in</strong> of the 50S subunit of the ribosome and arebacteriostatic. The A-group prevents the b<strong>in</strong>d<strong>in</strong>g of the am<strong>in</strong>oacyl-tRNAto the 50S subunit of the ribosome. In contrast, the B-group facilitates therelease of the peptidyl-tRNA from the ribosome. Together they show astrong synergistic bactericidal activity, which can reach 100 times of theseparate components. The prist<strong>in</strong>amyc<strong>in</strong> biosynthetic gene cluster ischaracterized. It covers a region of about 210 kb where genes for PI andPII biosynthesis are <strong>in</strong>terspersed. Moreover, the prist<strong>in</strong>amyc<strong>in</strong> cod<strong>in</strong>gregion is <strong>in</strong>terrupted by a cryptic secondary metabolite gene cluster whichprobably encodes for an act<strong>in</strong>orhod<strong>in</strong>-like compound. Seven regulatorygenes were identified with<strong>in</strong> the 210 kb region:spbR, papR1, papR2,papR3, papR4, papR5 and papR6. SpbR (S.prist<strong>in</strong>aespiralisbutyrolactoneresponsivetranscriptional repressor) is a specific receptor prote<strong>in</strong> for -butyrolactones and the global regulator of prist<strong>in</strong>amyc<strong>in</strong> biosynthesis.papR1, papR2 and papR4 encode prote<strong>in</strong>s that are homologous to SARPswhich are pathway-specific transcriptional activator prote<strong>in</strong>s, whereaspapR3 and papR5 code both for prote<strong>in</strong>s that belong to the family of TetRrepressors. papR6 encodes a prote<strong>in</strong> belong<strong>in</strong>g to the class of responseregulators. On the basis of RT-PCR, bandshift and mutant analysis, aprelim<strong>in</strong>ary model of the regulation mechanism of prist<strong>in</strong>amyc<strong>in</strong>biosynthesis was established.Mast YJ, Wohlleben W, Sch<strong>in</strong>ko E.Identification and functional characterization of phenylglyc<strong>in</strong>ebiosynthetic genes <strong>in</strong>volved <strong>in</strong> prist<strong>in</strong>amyc<strong>in</strong> biosynthesis <strong>in</strong> Streptomyces prist<strong>in</strong>aespiralis.J Biotechnol.2010 Dec 10Mast Y, Weber T, Gölz M, Ort-W<strong>in</strong>klbauer R, Gondran A, Wohlleben W, Sch<strong>in</strong>ko E.Characterization of the'prist<strong>in</strong>amyc<strong>in</strong> supercluster' of Streptomyces prist<strong>in</strong>aespiralis.Microb Biotechnol. 2011 Oct 15MEP026Activation of a silent phenaz<strong>in</strong>e biosynthetic gene cluster fromStreptomyces reveals a novel phenaz<strong>in</strong>e conjugateO. Saleh 1 , T. Bonitz* 1 , A. Kulik 2 , N. Burkard 3 , A. Mühlenweg 4 , A. Vente 4 ,S. Polnick 1 , M. Lämmerhofer 1 , B. Gust 1 , H.-P. Fiedler 2 , L. Heide 11 University of Tüb<strong>in</strong>gen, Pharmaceutical Institute, Tüb<strong>in</strong>gen, Germany2 University of Tüb<strong>in</strong>gen, Faculty of Biology, Tüb<strong>in</strong>gen, Germany3 University of Tüb<strong>in</strong>gen, Institute for Organic Chemistry, Tüb<strong>in</strong>gen, Germany4 MerLion Pharmaceuticals GmbH, Berl<strong>in</strong>, GermanyThe activation of silent biosynthetic gene clusters is a pr<strong>in</strong>cipal challengefor genome m<strong>in</strong><strong>in</strong>g strategies <strong>in</strong> drug discovery. In the present study, aphenaz<strong>in</strong>e biosynthetic gene cluster was discovered <strong>in</strong> the Gram-positivebacterium Streptomyces tendae Tü1028. This gene cluster rema<strong>in</strong>ed silentunder a multitude of cultivation conditions, both <strong>in</strong> the genu<strong>in</strong>e producerstra<strong>in</strong> and <strong>in</strong> a heterologous expression stra<strong>in</strong>. However, <strong>in</strong>troduction of aconstitutive promoter upstream of the phenaz<strong>in</strong>e biosynthesis genes led tothe production of phenaz<strong>in</strong>e-1-carboxylic acid (PCA) and of a newderivative thereof, i.e. a conjugate of PCA and L-glutam<strong>in</strong>e. The l<strong>in</strong>kage ofPCA to L-glutam<strong>in</strong>e by amide bond formation was catalyzed by enzymesof the heterologous expression host Streptomyces coelicolor M512 andmay represent a detoxification mechanism. The gene cluster also conta<strong>in</strong>edgenes for all enzymes of the mevalonate pathway and for an aromaticprenyltransferase, thereby resembl<strong>in</strong>g gene clusters for prenylatedphenaz<strong>in</strong>es. However, purification and biochemical <strong>in</strong>vestigation of theprenyltransferase proved that it does not prenylate phenaz<strong>in</strong>es buthydroxynaphthalene substrates, show<strong>in</strong>g very similar properties as NphBof naphterp<strong>in</strong> biosynthesis (Kuzuyma et al., Nature 2005; 435: 983-7).MEP027Genetical analysis of the biosynthesis and z<strong>in</strong>c-regulation of[S,S]-EDDS, a biodegradable EDTA alternative produced byAmycolatopsis japonicumM. SpohnInterfakultäres Institut für Mikrobiologie und Infektionsmediz<strong>in</strong>,Mikrobiologie/Biotechnologie, Tüb<strong>in</strong>gen, GermanyEDDS (Ethylene-diam<strong>in</strong>e-disucc<strong>in</strong>ic acid) produced by Amycolatopsisjaponicum is a suitable biodegradable alternative for the syntheticchelat<strong>in</strong>g agent EDTA, which has become the highest concentrated wastecompound <strong>in</strong> surface waters.EDDS is isomeric with EDTA and has similar properties. But <strong>in</strong> contrast toEDTA it conta<strong>in</strong>s two asymmetric carbon atoms, result<strong>in</strong>g <strong>in</strong> the existenceof three optical isomers, [S,S]-EDDS, [R,R]-EDDS and [R,S]-EDDS. A.japonicum produces the biodegradable S,S-configuration of EDDS.The biosynthesis of EDDS <strong>in</strong> A. japonicum is strictly z<strong>in</strong>c regulated. Az<strong>in</strong>c concentration of 5 M represses the production of EDDS at any timeof the fermentation [CEBULLA, 1995].In a hypothetical EDDS biosynthesis pathway oxalacetate and theaprote<strong>in</strong>ogenic am<strong>in</strong>oacid diam<strong>in</strong>opropionic acid (DAP) are covalentlybonded to form an <strong>in</strong>termediate which is subsequently processed <strong>in</strong> severalsteps to f<strong>in</strong>ally form [S,S]-EDDS [CEBULLA, 1995]. DAP is also used asa build<strong>in</strong>g block <strong>in</strong> other secondary metabolites with elucidatedbiosynthesis pathway like zwittermic<strong>in</strong> A and staphyloferr<strong>in</strong> B [ZHAO, 2008;CHEUNG, 2009]. Genetic screen<strong>in</strong>g <strong>in</strong> A. japonicum us<strong>in</strong>g the sequenceencod<strong>in</strong>g the DAP-synthesiz<strong>in</strong>g enzymes resulted <strong>in</strong> the identification of a generegion encod<strong>in</strong>g putative EDDS-biosynthesis-enzymes.To confirm their <strong>in</strong>volvement <strong>in</strong> the EDDS biosynthesis we compared theirtranscription patterns of A. japonicum cultures grown <strong>in</strong> z<strong>in</strong>c-conta<strong>in</strong><strong>in</strong>g(none EDDS production) and z<strong>in</strong>c-free (EDDS production) media. Theputative DAP-biosynthesis genes are only expressed under EDDSproduction conditions and are strictly repressed only by z<strong>in</strong>c and no otherdivalent metal ion.By directed mutagenesis and heterologous expression we want to evidencethe responsibility of these z<strong>in</strong>c-repressed genes for the EDDS production.CEBULLA, I. (1995). Gew<strong>in</strong>nung komplexbildender Substanzen mittels Amycolatopsis orientalis.Dissertation, Universität Tüb<strong>in</strong>gen.CHEUNG, J; BEASLEY, F; LIU, S; LAJOIE, G AND HENRICHS, D (2009). Molecular charakterizationof staphyloferr<strong>in</strong> B biosynthesis <strong>in</strong> Staphylococcus aureus. Molecular Microbiology 74(3); 594-608.ZHAO, C; SONG, C; LUO, Y; YU, Z AND SUN, M. (2008). L-2,3-Diam<strong>in</strong>opropionate: One of thebuild<strong>in</strong>g blocks for the biosynthesis of Zwittermic<strong>in</strong> A <strong>in</strong> Bacillus thur<strong>in</strong>gensis susp. kurstaki stra<strong>in</strong> YBT-1520. FEBS Letters 582; 3125-3131.MEP028Analysis of the biosynthesis of ast<strong>in</strong>s from Aster tataricus andcyclochlorot<strong>in</strong>e from Penicillium islandicumL. Flor*, K.-H. van PéeTU Dresden, Biochemistry, Dresden, GermanyAst<strong>in</strong>s are cyclic pentapeptides isolated from roots of the plant Astertataricus.The root extract shows potent anti-tumour activity <strong>in</strong> mouse tests(1). However, the amounts of ast<strong>in</strong>s that can be isolated from plants arevery low and chemical synthesis is accompanied by negative impacts onthe environment. Therefore, the project ‚Multi enzyme systems <strong>in</strong>volved <strong>in</strong>ast<strong>in</strong> biosynthesis and their use <strong>in</strong> heterologous ast<strong>in</strong> production(MESIAB)‘ aims at enhanc<strong>in</strong>g the production of ast<strong>in</strong>s us<strong>in</strong>g moleculargenetic tools. So far, ast<strong>in</strong>s A-J are known. Cyclochlorot<strong>in</strong>e, a secondarymetabolite with high similarity to ast<strong>in</strong>s, has been isolated from the fungusPenicillium islandicum. Cyclochlorot<strong>in</strong>e is a hepatotoxic compoundcaus<strong>in</strong>g necrosis, vacuolation of liver cells and development of blood lakes(2). Because of the high similarity of the peptides (3), similar enzymesshould be <strong>in</strong>volved <strong>in</strong> the biosynthetic pathways of ast<strong>in</strong>s andcyclochlorot<strong>in</strong>e. Both metabolites conta<strong>in</strong> a dichlor<strong>in</strong>ated pyrrolecarboxylic acid derivative which is most likely derived from prol<strong>in</strong>e. It isassumed that chlor<strong>in</strong>ation occurs on the level of a peptide carrier prote<strong>in</strong>tethered pyrrol carboxylic acid moiety by a flav<strong>in</strong>-dependent halogenase.The anticarc<strong>in</strong>ogenic activity of ast<strong>in</strong>s relies on the cyclic peptide and onthe chlor<strong>in</strong>ated prol<strong>in</strong>e residue (4,5). So far, neither a flav<strong>in</strong>-dependenthalogenase nor nonribosomal peptide synthethases have been described <strong>in</strong>plants. Via HPLC-MS from extracts of dry roots of Aster tataricus alltypes of ast<strong>in</strong>s could be detected, as well as cyclochlorot<strong>in</strong>e from culturemedia of P. islandicum. For genetic analysis we are <strong>in</strong> the process ofsequenc<strong>in</strong>g the genome of P. islandicum and construct<strong>in</strong>g cDNA-librariesfor A. tataricus and P. islandicum.(1) Morita et al. (1995) Tetrahedron, 51, 4, 1121-1132(2) Ghoh et al. (1978) App. Environ. Microb., 35, 6, 1074-1078(3) Schumacher et al. (1999) Tet. Letters, 40, 455-458(4) Saviano et al., 2004, Biopolymers, 76, 6, 477-84(5) Cozzol<strong>in</strong>o et al. (2005) Carc<strong>in</strong>ogenesis, 26, 733-739MEP029Secondary metabolism and morphogenesis <strong>in</strong> the penicill<strong>in</strong>producer Penicillium chrysogenum is regulated by the velvet-likecomplexS. Bloemendal*, B. Hoff, K. Kopke, A. Katschorowski, S. Milbredt,J. Kamerewerd, U. KückRuhr-Universität Bochum, Christian Doppler Labor für "Biotechnologieder Pilze", Bochum, GermanyThe recent discovery of a velvet complex conta<strong>in</strong><strong>in</strong>g several globalregulators of secondary metabolism <strong>in</strong> the model fungus Aspergillusnidulans [1,2] raises the question whether similar type complexes directfungal development and secondary metabolism <strong>in</strong> genera other thanAspergillus. The filamentous fungus Penicillium chrysogenum is the ma<strong>in</strong><strong>in</strong>dustrial producer of the pharmaceutically relevant beta-lactam antibioticpenicill<strong>in</strong>. All three biosynthesis genes are found <strong>in</strong> a s<strong>in</strong>gle cluster and theexpression of these genes is known to be controlled by a complex networkof global regulators.Here we provide a functional analysis of a velvet-like complex <strong>in</strong> a P.chrysogenum producer stra<strong>in</strong> that underwent several rounds of UVmutagenesis dur<strong>in</strong>g a stra<strong>in</strong> improvement program [3,4]. This complexBIOspektrum | Tagungsband <strong>2012</strong>
99comprises several structurally conserved velvet-like prote<strong>in</strong>s that havedist<strong>in</strong>ct developmental roles, illustrat<strong>in</strong>g the functional plasticity of theseregulators. We performed extensive phenotypic characterizations of s<strong>in</strong>gleand double knockout mutants us<strong>in</strong>g the codon-optimized FLP/FRTrecomb<strong>in</strong>ation system [5]. Data from penicill<strong>in</strong> bioassays andquantification of conidiospores of these knockout mutants clearly showthat all velvet-like prote<strong>in</strong>s are <strong>in</strong>volved <strong>in</strong> secondary metabolism andother dist<strong>in</strong>ct developmental processes. By detailed fluorescencemicroscopy and prote<strong>in</strong>-prote<strong>in</strong> <strong>in</strong>teraction studies us<strong>in</strong>g bimolecularfluorescence complementation, tandem-aff<strong>in</strong>ity purification and yeast twohybrid,we want to extend the analysis of the velvet-like complex <strong>in</strong> P.chrysogenum. Our results widen the current picture of regulatory networkscontroll<strong>in</strong>g both fungal secondary metabolism and morphogenesis, whichis significant for the genetic manipulation of fungal metabolism as part of<strong>in</strong>dustrial stra<strong>in</strong> improvement programs.[1] Bayram et al. (2008) Science 13:1504-1506[2] Calvo AM (2008) Fungal Genet Biol 45: 1053-1061[3] Hoff B, Kamerewerd J, Sigl C, Mitterbauer R, Zadra I, Kürnste<strong>in</strong>er H, Kück U (2010) Eukaryot Cell:9:1236-50[4] Hoff B, Kamerewerd J, Sigl C, Zadra I, Kück U (2010) Appl Microbiol Biotechnol 85: 1081-1094[5] Kopke K, Hoff B, Kück U (2010) Appl Environ Microbiol 76:4664-4674MEP030Phenguignardic acid and guignardic acid, phytotoxicsecondary metabolites from the grape black rot fungusGuignardia bidwelliiI. Buckel* 1 , D. Molitor 2 , J. Liermann 3 , B. Berkelmann-Löhnertz 4 , T. Opatz 3 ,E. Th<strong>in</strong>es 11 Institute of Biotechnology and Drug Research (IBWF), Plant protection,Kaiserslautern, Germany2 Centre de Recherche Public – Gabriel Lippmann, Department Environmentand Agro-Biotechnologies, Belvaux, Luxembourg3 Johannes-Gutenberg-University, Institute of Organic Chemistry, Ma<strong>in</strong>z,Germany4 Geisenheim Research Center, Department of Phytomedic<strong>in</strong>e, Geisenheim,GermanyThe causal agent of black rot on grapes is the phytopathogenicfungusGuignardia bidwellii. Black rot is one of the most devastat<strong>in</strong>gdiseases on grapes and s<strong>in</strong>ce 2002 a serve outbreak of the disease wasevident <strong>in</strong> some German w<strong>in</strong>egrow<strong>in</strong>g regions. The <strong>in</strong>fection was observed<strong>in</strong> abandoned v<strong>in</strong>eyards primarily, but subsequently an expansion tocultivated v<strong>in</strong>eyards was found. The disease can result <strong>in</strong> significant croplosses rang<strong>in</strong>g from 5 to 80 % of the total yield.The <strong>in</strong>fection cycle ofGuignardia bidwelliiis characterized by two phases,a symptomless <strong>in</strong>itial phase followed by a necrotrophic phase. Thus thefungus is classified as a hemibiotrophic pathogen. Phytopathogenic fungioften produce phytotox<strong>in</strong>s for a successful colonisation of the plant. Suchlow-molecular compounds are frequently <strong>in</strong>volved <strong>in</strong> disease symptomformation.Bioactivity guided isolation led to the identification of phenguignardicacid, a new secondary metabolite from submerged cultures of the grapeblack rot fungus as phytotoxic agent. The compound is structurally relatedto guignardic acid, a dioxolanone moiety conta<strong>in</strong><strong>in</strong>g metabolite isolatedpreviously fromGuignardiaspecies. However, <strong>in</strong> contrast to guignardicacid, which is presumably synthesised via deam<strong>in</strong>ation products of val<strong>in</strong>eand phenylalan<strong>in</strong>e, the biochemical precursors for the biosynthesis of thenew phytotox<strong>in</strong> appears to be exclusively phenylalan<strong>in</strong>e.Both compounds were characterised <strong>in</strong> biological assays by us<strong>in</strong>g v<strong>in</strong>e leafsegments or <strong>in</strong>tact plants. Dur<strong>in</strong>g fermentation optimisation sevenstructurally related secondary metabolites were detected and isolated. Fourof the seven secondary metabolites were found to be phytotoxic on v<strong>in</strong>eleaf segments.MEP031The genetic potential of Streptomyces coll<strong>in</strong>us Tü 365 tosynthesize secondary metabolitesS. Rohrer* 1 , D. Iftime 1 , C. Rückert 2 , J. Kal<strong>in</strong>owski 2 , W. Wohlleben 3 , T. Weber 11 Interfakultäres Institut für Mikrobiologie und Infektionsmediz<strong>in</strong> / UniversitätTüb<strong>in</strong>gen, Mikrobiologie/Biotechnologie - Secondary Metabolite Genomics,Tüb<strong>in</strong>gen, Germany2 CeBiTec / Universität Bielefeld, Bielefeld, Germany3 Interfakultäres Institut für Mikrobiologie und Infektionsmediz<strong>in</strong> / UniversitätTüb<strong>in</strong>gen, Mikrobiologie/Biotechnologie, Tüb<strong>in</strong>gen, GermanyStreptomycetes are common producers of secondary metabolites likeantibiotics. The stra<strong>in</strong> Streptomyces coll<strong>in</strong>us Tü 365 is known to producethe antibiotic Kirromyc<strong>in</strong> (Wolf and Zähner, 1972; Weber et al., 2008). Bybio<strong>in</strong>formatic analysis us<strong>in</strong>g the antiSMASH software (a secondarymetabolite prediction tool, Medema et al., 2011) 26 additional secondarymetabolite gene clusters were identified <strong>in</strong> the genome of this stra<strong>in</strong>, buttheir function and their biosynthesis products rema<strong>in</strong> to be elucidated. Thegenome harbors five clusters for NRPSs, five for terpenes, four for PKSsand four for PKS-NRPS-hybrids. Moreover, there are clusters for threesiderophores, a bacterioc<strong>in</strong>, an ecto<strong>in</strong>, a melan<strong>in</strong> and a lantibiotic present.Most of the clusters are not expressed or expressed at very low levelsunder standard laboratory conditions, but gene expression can be <strong>in</strong>ducedunder certa<strong>in</strong> conditions.Here we show transcriptional analyses of some of these gene clusters.First, the stra<strong>in</strong> was cultivated <strong>in</strong> different growth media to analyze thelevel of expression of the key genes from selected biosynthetic geneclusters by reverse transcriptase PCR (RT-PCR). RNA samples were takenat different time po<strong>in</strong>ts from the various liquid cultures. The obta<strong>in</strong>ed geneexpression data will facilitate the identification of the desired compounds.In a parallel approach cluster 1, a lantibiotic-like gene cluster, was <strong>in</strong>vestigated<strong>in</strong> heterologous expression studies. Cluster 1 consists of a two-gene transporter,a putative lantibiotic prepeptide and a rare putative class IV lantibiotics cyclase.The prepeptide was expressed <strong>in</strong> E. coli and the prepeptide <strong>in</strong> comb<strong>in</strong>ation withthe cyclase was expressed <strong>in</strong> S. lividans Tk 23.1. Wolf and Zähner, 1972. Metabolic products of microorganisms. 99: Kirromyc<strong>in</strong>. Arch.Microbiol. 83,2:147-154.2. Weber et al., 2008. Molecular analysis of the kirromyc<strong>in</strong> biosynthetic gene cluster revealed beta-alan<strong>in</strong>e asprecursor of the pyridone moiety. Chem Biol. 15, 2: 175-88.3. Medema et al., 2011. antiSMASH: rapid identification, annotation and analysis of secondary metabolitebiosynthesis gene clusters <strong>in</strong> bacterial and fungal genome sequences. Nucleic Acids Res. 39: 339-346.MEP032Identification of Gene Clusters for Biosynthesis ofBromotyros<strong>in</strong>e <strong>in</strong> Metagenomes of the Mar<strong>in</strong>e SpongesIanthella basta and Aplys<strong>in</strong>a cavernicolaK. Kunze*, K.-H. van PeeTU Dresden, Institut für Biochemie, Dresden, GermanyMar<strong>in</strong>e sponges (Verongida) are able to produce a set of bioactivemolecules. Among those compounds are bromtyros<strong>in</strong>es and bromotyros<strong>in</strong>ederivatives. Bromtyros<strong>in</strong>es (Bts) are known to have pharmacologicalrelevance. In mar<strong>in</strong>e sponges, Bts are typically located with<strong>in</strong> thespong<strong>in</strong>g/chit<strong>in</strong> based skeleton. They are supposed to protect the chit<strong>in</strong>skeleton from degradation, through chit<strong>in</strong>ase <strong>in</strong>hibition. Bts from thespecies Ianthella basta and Aplys<strong>in</strong>a cavernicola have already beendetected, but were not further <strong>in</strong>vestigated so far. From other biosyntheticpathways, for example the biosynthetic gene cluster of the peptideantibiotic balhimyc<strong>in</strong>, it is known, that halogenation of tyros<strong>in</strong>e residues iscatalysed by flav<strong>in</strong>-dependent halogenases. It should thus be possible todetect the Bt-biosynthesic gene cluster of I.basta and A. cavernicola byus<strong>in</strong>g the degenerated PCR primer pair TyrhalA_for/rev which is specificfor flav<strong>in</strong>-dependent tyros<strong>in</strong>e halogenases. Sponges are known to beassociated to a large amount with bacterial symbionts. Therefore, it seemsquite likely that the bromotyros<strong>in</strong>e producer is rather a bacterial or fungalsymbiont than the sponge itself. To def<strong>in</strong>e the orig<strong>in</strong> of the detected genes,two different methods for the extraction of metagenomic DNA (eDNA; e =environmental) are used. With the first method, the whole eDNA ofsponges is isolated, whereas the second method uses an additionalsymbiont-enrichment-step prior to eDNA extraction. After detection of thehalogenase gene, it should be possible to identify the whole gene cluster byus<strong>in</strong>g a DNA library (<strong>in</strong> form of a fosmid library). F<strong>in</strong>ally, the flav<strong>in</strong>dependenthalogenases will be characterised with respect to itshalogenat<strong>in</strong>g activity and substrate specificity.Miao SC, Andersen RJ, Allen TM. Cytotoxic metabolites from the sponge Ianthella basta collected<strong>in</strong> Papua New Gu<strong>in</strong>ea. J Nat Prod. 1990 Nov-Dec;53(6):1441-6.Thoms C, Wolff M, Padmakumar K, Ebel R, Proksch P. Chemical defense of Mediterraneansponges Aplys<strong>in</strong>a cavernicola and Aplys<strong>in</strong>a aerophoba. Z Naturforsch C. 2004 Jan-Feb;59(1-2):113-22.Pelzer S, Süssmuth R, Heckmann D, Recktenwald J, Huber P, Jung G, Wohlleben W. Identificationand analysis of the balhimyc<strong>in</strong> biosynthetic gene cluster and its use for manipulat<strong>in</strong>g glycopeptidebiosynthesis <strong>in</strong> Amycolatopsis mediterranei DSM5908. Antimicrob Agents Chemother. 1999Jul;43(7):1565-73.Webster NS, Taylor MW. Mar<strong>in</strong>e sponges and their microbial symbionts: love and otherrelationships. Environ Microbiol. 2011 Mar 28. doi: 10.1111/j.1462-2920.2011.02460.x. [Epubahead of pr<strong>in</strong>t] PubMed PMID: 21443739.MEP033Purification and clon<strong>in</strong>g of the O-Methyltransferase ofAlternaria alternataF. Oswald*, K. Brzonkalik, C. Syldatk, A. NeumannKIT, Technische Biologie, Karlsruhe, GermanyBlack-moulds of the genus Alternaria contam<strong>in</strong>ate many foodstuffs andagricultural products. In addition to the economical damage these fungican produce harmful secondary metabolites, the Alternaria tox<strong>in</strong>s. Some ofthese mycotox<strong>in</strong>s such as alternariol (AOH), alternariolmonomethylether(AME), altenuene (ALT) are polyketides and AOH is produced via thepolyketide pathway. AOH is than methylated by the alternariol-omethyltransferase,transferr<strong>in</strong>g a methyl group from SAM to AOH to yieldAME. The enzyme was partially purified and characterized, but thesequence is still unknown (1, 2).The Genome of Alternaria alternata was sequenced by the group of ChrisLawrence (3). In the genome 11 putative genes cod<strong>in</strong>g for polyketidesynthases were identified by Blast-analyses (4). Next to some of thesepolyketide synthetase genes for methyltransferases were also found. As thegenes for secondary metabolite production are usually clustered (5), it is likely,BIOspektrum | Tagungsband <strong>2012</strong>
- Page 5 and 6:
Instruments that are music to your
- Page 7 and 8:
General Information2012 Annual Conf
- Page 9 and 10:
SPONSORS & EXHIBITORS9Sponsoren und
- Page 11 and 12:
11BIOspektrum | Tagungsband 2012
- Page 13 and 14:
13BIOspektrum | Tagungsband 2012
- Page 16:
16 AUS DEN FACHGRUPPEN DER VAAMFach
- Page 20 and 21:
20 AUS DEN FACHGRUPPEN DER VAAMFach
- Page 22 and 23:
22 AUS DEN FACHGRUPPEN DER VAAMMitg
- Page 24 and 25:
24 INSTITUTSPORTRAITin the differen
- Page 26 and 27:
26 INSTITUTSPORTRAITProf. Dr. Lutz
- Page 28 and 29:
28 CONFERENCE PROGRAMME | OVERVIEWS
- Page 30 and 31:
30 CONFERENCE PROGRAMME | OVERVIEWT
- Page 32 and 33:
32 CONFERENCE PROGRAMMECONFERENCE P
- Page 34 and 35:
34 CONFERENCE PROGRAMMECONFERENCE P
- Page 36 and 37:
36 SPECIAL GROUPSACTIVITIES OF THE
- Page 38 and 39:
38 SPECIAL GROUPSACTIVITIES OF THE
- Page 40 and 41:
40 SPECIAL GROUPSACTIVITIES OF THE
- Page 42 and 43:
42 SHORT LECTURESMonday, March 19,
- Page 44 and 45:
44 SHORT LECTURESMonday, March 19,
- Page 46 and 47:
46 SHORT LECTURESTuesday, March 20,
- Page 48 and 49: 48 SHORT LECTURESWednesday, March 2
- Page 50 and 51: 50 SHORT LECTURESWednesday, March 2
- Page 52 and 53: 52ISV01Die verborgene Welt der Bakt
- Page 54 and 55: 54protein is reversibly uridylylate
- Page 56 and 57: 56that this trapping depends on the
- Page 58 and 59: 58Here, multiple parameters were an
- Page 60 and 61: 60BDP016The paryphoplasm of Plancto
- Page 62 and 63: 62of A-PG was found responsible for
- Page 64 and 65: 64CEV012Synthetic analysis of the a
- Page 66 and 67: 66CEP004Investigation on the subcel
- Page 68 and 69: 68CEP013Role of RodA in Staphylococ
- Page 70 and 71: 70MurNAc-L-Ala-D-Glu-LL-Dap-D-Ala-D
- Page 72 and 73: 72CEP032Yeast mitochondria as a mod
- Page 74 and 75: 74as health problem due to the alle
- Page 76 and 77: 76[3]. In summary, hypoxia has a st
- Page 78 and 79: 78This different behavior challenge
- Page 80 and 81: 80FUP008Asc1p’s role in MAP-kinas
- Page 82 and 83: 82FUP018FbFP as an Oxygen-Independe
- Page 84 and 85: 84defence enzymes, were found to be
- Page 86 and 87: 86DNA was extracted and shotgun seq
- Page 88 and 89: 88laboratory conditions the non-car
- Page 90 and 91: 90MEV003Biosynthesis of class III l
- Page 92 and 93: 92provide an insight into the regul
- Page 94 and 95: 94MEP007Identification and toxigeni
- Page 96 and 97: 96various carotenoids instead of de
- Page 100 and 101: 100that the genes for AOH polyketid
- Page 102 and 103: 102Knoll, C., du Toit, M., Schnell,
- Page 104 and 105: 104pathogenicity of NDM- and non-ND
- Page 106 and 107: 106MPV013Bartonella henselae adhesi
- Page 108 and 109: 108Yfi regulatory system. YfiBNR is
- Page 110 and 111: 110identification of Staphylococcus
- Page 112 and 113: 112that a unit increase in water te
- Page 114 and 115: 114MPP020Induction of the NF-kb sig
- Page 116 and 117: 116[3] Liu, C. et al., 2010. Adhesi
- Page 118 and 119: 118virulence provides novel targets
- Page 120 and 121: 120proteins are excreted. On the co
- Page 122 and 123: 122MPP054BopC is a type III secreti
- Page 124 and 125: 124MPP062Invasiveness of Salmonella
- Page 126 and 127: 126Finally, selected strains were c
- Page 128 and 129: 128interactions. Taken together, ou
- Page 130 and 131: 130forS. Typhimurium. Uncovering th
- Page 132 and 133: 132understand the exact role of Fla
- Page 134 and 135: 134heterotrimeric, Rrp4- and Csl4-c
- Page 136 and 137: 136OTV024Induction of systemic resi
- Page 138 and 139: 13816S rRNA genes was applied to ac
- Page 140 and 141: 140membrane permeability of 390Lh -
- Page 142 and 143: 142bacteria in situ, we used 16S rR
- Page 144 and 145: 144bacteria were resistant to acid,
- Page 146 and 147: 1461. Ye, L.D., Schilhabel, A., Bar
- Page 148 and 149:
148using real-time PCR. Activity me
- Page 150 and 151:
150When Ms. mazei pWM321-p1687-uidA
- Page 152 and 153:
152OTP065The role of GvpM in gas ve
- Page 154 and 155:
154OTP074Comparison of Faecal Cultu
- Page 156 and 157:
156OTP084The Use of GFP-GvpE fusion
- Page 158 and 159:
158compared to 20 ºC. An increase
- Page 160 and 161:
160characterised this plasmid in de
- Page 162 and 163:
162Streptomyces sp. strain FLA show
- Page 164 and 165:
164The study results indicated that
- Page 166 and 167:
166have shown direct evidences, for
- Page 168 and 169:
168biosurfactant. The putative lipo
- Page 170 and 171:
170the absence of legally mandated
- Page 172 and 173:
172where lowest concentrations were
- Page 174 and 175:
174PSV008Physiological effects of d
- Page 176 and 177:
176of pH i in vivo using the pH sen
- Page 178 and 179:
178PSP010Crystal structure of the e
- Page 180 and 181:
180PSP018Screening for genes of Sta
- Page 182 and 183:
182In order to overproduce all enzy
- Page 184 and 185:
184substrate specific expression of
- Page 186 and 187:
186potential active site region. We
- Page 188 and 189:
188PSP054Elucidation of the tetrach
- Page 190 and 191:
190family, but only one of these, t
- Page 192 and 193:
192network stabilizes the reactive
- Page 194 and 195:
194conditions tested. Its 2D struct
- Page 196 and 197:
196down of RSs2430 influences the e
- Page 198 and 199:
198demonstrating its suitability as
- Page 200 and 201:
200RSP025The pH-responsive transcri
- Page 202 and 203:
202attracted the attention of molec
- Page 204 and 205:
204A (CoA)-thioester intermediates.
- Page 206 and 207:
206Ser46~P complex. Additionally, B
- Page 208 and 209:
208threat to the health of reefs wo
- Page 210 and 211:
210their ectosymbionts to varying s
- Page 212 and 213:
212SMV008Methanol Consumption by Me
- Page 214 and 215:
214determined as a function of the
- Page 216 and 217:
216Funding by BMWi (AiF project no.
- Page 218 and 219:
218broad distribution in nature, oc
- Page 220 and 221:
220SMP027Contrasting assimilators o
- Page 222 and 223:
222growing all over the North, Cent
- Page 224 and 225:
224SMP044RNase J and RNase E in Sin
- Page 226 and 227:
226labelled hydrocarbons or potenti
- Page 228 and 229:
228SSV009Mathematical modelling of
- Page 230 and 231:
230SSP006Initial proteome analysis
- Page 232 and 233:
232nine putative PHB depolymerases
- Page 234 and 235:
234[1991]. We were able to demonstr
- Page 236 and 237:
236of these proteins are putative m
- Page 238 and 239:
238YEV2-FGMechanistic insight into
- Page 240 and 241:
240 AUTORENAbdel-Mageed, W.Achstett
- Page 242 and 243:
242 AUTORENFarajkhah, H.HMP002Faral
- Page 244 and 245:
244 AUTORENJung, Kr.Jung, P.Junge,
- Page 246:
246 AUTORENNajafi, F.MEP007Naji, S.
- Page 249 and 250:
249van Dijk, G.van Engelen, E.van H
- Page 251 and 252:
251Eckhard Boles von der Universit
- Page 253 and 254:
253Anna-Katharina Wagner: Regulatio
- Page 255 and 256:
255Vera Bockemühl: Produktioneiner
- Page 257 and 258:
257Meike Ammon: Analyse der subzell
- Page 259 and 260:
springer-spektrum.deDas große neue