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VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

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150When Ms. mazei pWM321-p1687-uidA utilized methanol as a substrate, -glucuronidase activity was almost not detectable <strong>in</strong>dicat<strong>in</strong>g a tightregulation of gene expression by the p1687 promoter. Induction by theaddition of trimethylam<strong>in</strong>e led to a strong <strong>in</strong>crease of expression of theuidA gene and -glucuronidase activity was monitored by the productionof p-nitrophenol from p-nitrophenyl--D-glucuronide.In summary, we describe the first <strong>in</strong>ducible gene expression system <strong>in</strong> Ms.mazei. This will be used for the overproduction and characterization ofprote<strong>in</strong>s that cannot be produced <strong>in</strong> E. coli and other simple expressionsystems. This will be of particular <strong>in</strong>terest for prote<strong>in</strong>s that harbourcomplex prosthetic groups that are hardly found or absent <strong>in</strong> the doma<strong>in</strong>Bacteria, e.g. tungsten enzymes.[1] Metcalf WW, Zhang JK, Apol<strong>in</strong>ario E, Sowers KR, Wolfe RS (1997) A genetic system forArchaea of the genus Methanosarc<strong>in</strong>a: liposome-mediated transformation and construction ofshuttle vectors. PNAS 94: 2626-31.[2] Krätzer C, Car<strong>in</strong>i P, Hovey R, Deppenmeier U (2009) Transcriptional profil<strong>in</strong>g ofmethyltransferase genes dur<strong>in</strong>g growth of Methanosarc<strong>in</strong>a mazei on trimethylam<strong>in</strong>e. J Bacteriol191: 5108-15.OTP056Antibacterial <strong>in</strong>vestigation of Artemisia campestris L (Asteraceae)M. Salem* 1 , A. Alruba 2 , J. El-turby 21 BioTechnology Research Center, Microbiology, Tripoli, Libyan ArabJamabiriya2 Tripoli university, pharmacy Facutly, pharmacy, Tripoli, Libyan ArabJamabiriyaArtemisia campestris L. (Asteraceae) is folk Libyan medic<strong>in</strong>al, smallaromatic perennial shrub that grow <strong>in</strong> North Africa and most of Europe.The grounded of aerial parts was extracted <strong>in</strong> soxhlet apparatussuccessively, each crude extract was subjected to antibacterial evaluationaga<strong>in</strong>st human pathogenic bacteria,Staph.aureus, E.coli, Salmonella spp.And Ps. aerug<strong>in</strong>osa, by us<strong>in</strong>g agar cup-cut diffusion assay .The resultsreported that chloroform and methanolic extracts were effectiveaga<strong>in</strong>stStaph.aureus <strong>in</strong> which shown by MIC is 12.5mg .OTP057Screen<strong>in</strong>g for thermostable cellulases for lignocellulosicbiomass degradationC. Schröder*, V. Bockemühl, G. AntranikianTechnical University Hamburg-Harburg, Technical Microbiology,Hamburg, GermanyExist<strong>in</strong>g bioref<strong>in</strong>eries for ethanol production ma<strong>in</strong>ly use starch-biomasssuch as wheat and corn. To avoid the usage of feed- and foodstuff,lignocellulosic biomass lately atta<strong>in</strong>ed particular <strong>in</strong>terest of research.Lignocellulosic material like wheat straw is a challeng<strong>in</strong>g substrate due tothe compact, often crystall<strong>in</strong>e structure of cellulose-, hemicellulose- andlign<strong>in</strong>-polymers. To obta<strong>in</strong> fermentable sugar-monomers from celluloseand hemicellulose by enzymatic degradation, the wheat straw has to bedecomposed, e.g. by hydrothermal processes.To discover novel thermostable cellulases for degradation of the cellulosicfraction, suitable environmental samples (T = 60-90°C, pH 5-7) wereenriched by us<strong>in</strong>g cellulose as sole carbon source. The DNA of thecultured microbial consortia was isolated for metagenomic libraryconstruction. Subsequently, the gene library was screened for the presenceof cellulase encod<strong>in</strong>g genes by detection of endoglucanase,cellobiohydrolase and -glucosidase activity us<strong>in</strong>g colorimetric activityassays. Additionally, for activity-based screen<strong>in</strong>g, metagenomic librarieswere constructed, directly us<strong>in</strong>g isolated DNA from hot spr<strong>in</strong>gs from theAzores without previous enrichment procedures. Furthermore a sequencebasedscreen<strong>in</strong>g approach was also applied us<strong>in</strong>g sequence data of ametagenome. By align<strong>in</strong>g the nucleotide sequences with known genes,potential cellulase-encod<strong>in</strong>g open read<strong>in</strong>g frames were identified.The activity-based screen<strong>in</strong>g revealed genes encod<strong>in</strong>g putativeendoglucanases and -glucosidases. The sequence-based analysis resulted<strong>in</strong> the detection of one gene encod<strong>in</strong>g another putative endoglucanase.Further work will be performed to express the identified genes <strong>in</strong> a suitablehost system such as E. coli and P. pastoris. The correspond<strong>in</strong>g enzymeswill be tested with regard to activity towards the cellulosic fraction of thedecomposed wheat straw.OTP058Translational regulation <strong>in</strong> Haloferax volcaniiJ. Schmitt*, J. SoppaUniversität Frankfurt, Institut für molekulare Biowissenschaften/AGSoppa, Frankfurt, GermanyTranslational regulation is an important cellular mechanism for geneexpression control and is present <strong>in</strong> all three doma<strong>in</strong>s of life. It enables thecell to answer very rapidly to changes <strong>in</strong> environmental conditions and isthus <strong>in</strong>volved <strong>in</strong> cell survival, differentiation, stress adaptation andresponse to specific stimuli.To ga<strong>in</strong> a global overview of growth phase-dependent translationalregulation translatome analyses were performed with Haloferax volcaniiand Halobacterium sal<strong>in</strong>arum (Lange et al., 2007). Polysome-boundmRNA was separated from free mRNA by sucrose gradient centrifugationand the two mRNA fractions were compared us<strong>in</strong>g DNA microarrays.Thereby it was revealed for the two species that 6% and 20%, respectively,of all genes showed growth phase-dependent differential translationalregulation (Lange et al.,2007). In H. volcanii many transcripts weretranslated with under-average efficiency <strong>in</strong> exponential as well asstationary phase, <strong>in</strong>dicat<strong>in</strong>g that their translation might be <strong>in</strong>duced <strong>in</strong>response to a different stimulus. Therefore, currently translatome analysesare performed after the application of various stress conditions, e.g. highand low osmolarity, high and low temperature, oxidative stress, poorcarbon sources.It was also revealed that the 5´- and 3´-UTRs are necessary and sufficientto transfer translational control from native transcripts to a reportertranscript. The 5´-UTRs are apparently necessary to down-regulateconstitutive translational <strong>in</strong>itiation, while <strong>in</strong>duction of translation isencoded <strong>in</strong> the 3´-UTRs (Brenneis and Soppa, 2009).However, the molecular mechanism and <strong>in</strong>volved prote<strong>in</strong>s are stillunknown. Therefore, the H. volcanii genome was searched for putativeRNA-b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong>s. To ga<strong>in</strong> <strong>in</strong>sight <strong>in</strong>to their function the respectivegenes for selected prote<strong>in</strong>s were deleted and a conditional overexpressionsystem was generated. Analysis of the deletion and overexpressionmutants is currently under way.C. Lange, A. Zaigler, M. Hammelmann, J. Twellmeyer, G. Raddatz, S.C. Schuster,D. Oesterhelt & J. Soppa (2007) BMC Genomics 8:415M. Brenneis, J. Soppa (2009) PLoS ONE 4(2): e4484OTP059Biocatalytical Cyclization of CitronellalG. Siedenburg* 1 , D. Jendrossek 1 , M. Breuer 2 , B. Juhl 3 , J. Pleiss 3 , M. Seitz 3 ,J. Klebensberger 3 , B. Hauer 31 University of Stuttgart, Institute for Microbiology, Stuttgart, Germany2 BASF SE, Ludwigshafen, Germany3 University of Stuttgart, Institute of Technical Biochemistry, Stuttgart, GermanyHopanoids stabilize the cytoplasm membrane of many bacteria similar tothe function of sterols <strong>in</strong> eukarotes. Key enzyme of hopanoid biosynthesisis the squalene-hopene cyclase (SHC) which catalyzes the polycyclizationreaction of squalene to the pentacyclic triterpene hopene - the precursor ofall hopanoids. The SHC-catalyzed reaction is one of the most complexbiochemical reactions and <strong>in</strong>volves the formation of 5 r<strong>in</strong>g structures, thealteration of 13 covalent bonds, and the formation of 9 stereo centers.Zymomonas mobilis- an important ethanol produc<strong>in</strong>g bacterium - harbourstwo SHC-encod<strong>in</strong>g genes that were cloned and over-expressed <strong>in</strong> E. coli.Hopene-form<strong>in</strong>g activity was confirmed for both SHCs. One of the SHCswas additionally able to cyclise the monoterpene citronellal to isopulegol.This f<strong>in</strong>d<strong>in</strong>g is contrary to former results us<strong>in</strong>g the model SHC fromAlicyclobacillus acidocaldarius 1, 2 and several other SHCs cloned fromdifferent organisms <strong>in</strong> this study. Isopulegol is used as a flavor <strong>in</strong> differentproducts and is an important <strong>in</strong>termediate <strong>in</strong> the production of menthol.Our f<strong>in</strong>d<strong>in</strong>g is remarkable because cyclization of mono-, sequi- andditerpenes normally requires activation of the l<strong>in</strong>ear precursor bydiphosphate 3, 4 . Depend<strong>in</strong>g on the stereo-configuration of the substratedifferent isopulegol stereoisomers were formed. Cyclization of citronellalby SHC is the first example of an enzyme-catalyzed cyclization of a notactivatedl<strong>in</strong>ear monoterpene.Further work focussed on the optimization of the SHC-catalyzedcyclization of citronellal by mutagenesis of SHC active site am<strong>in</strong>o acids.Several SHC mute<strong>in</strong>s revealed a strong <strong>in</strong>crease <strong>in</strong> isopulegol-form<strong>in</strong>gactivity. Some mute<strong>in</strong>s were able to catalyze an almost completeconversion of citronellal to isopulegol ( 90%) compared to only 30% forthe wild type enzyme. Interest<strong>in</strong>gly, the stereo-configuration and therelative isomer composition of the product were altered <strong>in</strong> some mute<strong>in</strong>s.An overview on the cyclization potential of wild type and mutant SHCsfrom different sources will be given.1. Hosh<strong>in</strong>o, T.; Ohashi, S.Org.Lett.2002, 4, 2553-2556.2. Wendt, K. U.; Lenhart, A.; Schulz, G. E.J Mol Biol1999, 286, (1), 175-87.3. Bohlmann, J.; Meyer-Gauen, G.; Croteau, R.Proc Natl Acad Sci U S A1998, 95, (8), 4126-33.4. Davis, E. M.; Croteau, R.Top. Curr. Chem.2000, 209, 53-95.OTP060Development of a novel system for the functional expressionand screen<strong>in</strong>g of membrane prote<strong>in</strong>sA. Malach* 1 , A. Heck 1 , K.-E. Jaeger 2 , T. Drepper 11 He<strong>in</strong>rich-He<strong>in</strong>e-Universität, Institut für molekulare Enzymtechnolgie - AGDrepper, Düsseldorf, Germany2 He<strong>in</strong>rich-He<strong>in</strong>e-Universität, Institut für molekulare Enzymtechnolgie,Düsseldorf, GermanyThe heterologous expression of membrane prote<strong>in</strong>s and enzymes us<strong>in</strong>gstandard expression hosts as E. coli is often hampered by many differentfactors <strong>in</strong>clud<strong>in</strong>g low expression efficiencies, degradation of the product,product toxicity, <strong>in</strong>sufficient prote<strong>in</strong> fold<strong>in</strong>g or formation of <strong>in</strong>clusionBIOspektrum | Tagungsband <strong>2012</strong>

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