238YEV2-FGMechanistic <strong>in</strong>sight <strong>in</strong>to receptor endocytosis and endosomalA/B tox<strong>in</strong> traffick<strong>in</strong>g <strong>in</strong> yeastE. Gießelmann, J. Dausend, B. Becker, M.J. Schmitt*Saarland University, Department of Biosciences (FR 8.3), Molecular &Cell Biology, Saarbrücken, GermanyYeast stra<strong>in</strong>s <strong>in</strong>fected with the M28 dsRNA killer virus secrete aheterodimeric killer tox<strong>in</strong> (K28) belong<strong>in</strong>g to the family of microbial A/Btox<strong>in</strong>s. After receptor-mediated cell entry, the tox<strong>in</strong> reaches the cytosol ofa target cell by travell<strong>in</strong>g the secretion pathway <strong>in</strong> reverse [1]. The alphatox<strong>in</strong> <strong>in</strong>hibits DNA synthesis <strong>in</strong> the nucleus and causes apoptotic cell death[1]. Key components <strong>in</strong> the <strong>in</strong>toxification process are the -C-term<strong>in</strong>alHDEL motiv of the tox<strong>in</strong> and its <strong>in</strong>teraction with the HDEL receptorErd2p of the target cell. Most recent CSLM data <strong>in</strong> conjunction withErd2p-based reporter assays <strong>in</strong>dicated that Erd2p colocalizes to the plasmamembrane where it functions as membrane receptor for tox<strong>in</strong> endocytosis.Sequence analysis of Erd2p revealed N- and C-term<strong>in</strong>al endocytic motifsrelevant for receptor <strong>in</strong>ternalization. Physical Erd2p/Rsp5p <strong>in</strong>teractionidentified via BiFC analysis <strong>in</strong>dicated that receptor (mono)ubiquitiationtriggers the <strong>in</strong>ternalization of receptor-bound tox<strong>in</strong>. Additional studiesverified the importance of early mediators of endocytosis, <strong>in</strong>clud<strong>in</strong>g thecoat build<strong>in</strong>g complex and the act<strong>in</strong> mach<strong>in</strong>ery for tox<strong>in</strong> uptake as well asAP2-complex components, which so far have only been described to be<strong>in</strong>volved <strong>in</strong> the endocytosis of mammalian cells [2]. To further dissecttox<strong>in</strong> traffick<strong>in</strong>g, biologically active K28/mCherry fusions were expressed<strong>in</strong> Pichia pastoris and used to track the tox<strong>in</strong>'s transit through theendocytic pathway, <strong>in</strong>clud<strong>in</strong>g TIRF microscopy for quantitative analysesof Erd2-GFP mobility <strong>in</strong> wild-type yeast and selected endocytic mutants.Our studies were extended by <strong>in</strong>vestigat<strong>in</strong>g uptake and endocytic transportof the plant A/B tox<strong>in</strong> ric<strong>in</strong>. This heteromeric glycoprote<strong>in</strong> belongs to thefamily of ribosome <strong>in</strong>activat<strong>in</strong>g prote<strong>in</strong>s (RIPs) whose <strong>in</strong> vivo toxicityresults from the depur<strong>in</strong>ation of 28S rRNA catalyzed by the A-cha<strong>in</strong> ofric<strong>in</strong>, RTA. S<strong>in</strong>ce extention of RTA by a mammalian-specific ER retentionsignal (KDEL) significantly <strong>in</strong>creases RTA toxicity aga<strong>in</strong>st mammaliancells, we analyzed the phenotypic effect of RTA carry<strong>in</strong>g the yeast-specificER retention motif HDEL. Interest<strong>in</strong>gly RTA HDEL showed a similarcytotoxic effect on yeast as a correspond<strong>in</strong>g RTA KDEL variant on HeLacells. Furthermore, we established a powerful yeast bioassay for RTA <strong>in</strong>vivo uptake and traffick<strong>in</strong>g. The assay verified the RTA resistantphenotype seen <strong>in</strong> yeast mutants defective <strong>in</strong> early steps ofendocytosis(end3) and/or <strong>in</strong> RTA depur<strong>in</strong>ation activity(rpl12B) [3].Thus K28 and RTA represent powerful tools and substrates for generalstudies of endocytosis and endosomal traffick<strong>in</strong>g <strong>in</strong> eukaryotic cells.K<strong>in</strong>dly supported by grants from the Deutsche Forschungsgeme<strong>in</strong>schaft.1. M.J. Schmitt and F. Bre<strong>in</strong>ig (2006). Nat. Rev. Microbiol.4:, 212.2. S.Y. Carroll et al. (2009). Dev. Cell17: 552.3. B. Becker and M.J. Schmitt (2011). Tox<strong>in</strong>s7: 834.YEV3-FGThe conjunction of mRNA export and translationA. Hackmann, T. Gross, C. Baierle<strong>in</strong>, H. Krebber*University of Gött<strong>in</strong>gen, Institute for Microbiology and Genetics,Department Molecular Genetics, Gött<strong>in</strong>gen, GermanyIn recent years it has been shown that some mRNA export factors are also<strong>in</strong>volved <strong>in</strong> translation. Here we report on the identification of a noveltransport function of the yeast mRNA export factor Npl3 <strong>in</strong> the export oflarge ribosomal subunits from the nucleus to the cytoplasm. Interest<strong>in</strong>gly,while mRNAs are exported via the RNA-b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong> Npl3 and its<strong>in</strong>teract<strong>in</strong>g export receptor Mex67, the export of large ribosomal subunitsalso requires Mex67, however, <strong>in</strong> this case Mex67 directly b<strong>in</strong>ds to the 5SrRNA and does not require the Npl3-adapter. We discovered a novelfunction of Npl3 <strong>in</strong> mediat<strong>in</strong>g pre-60S ribosomal subunit export<strong>in</strong>dependent of Mex67. Npl3 <strong>in</strong>teracts with the 25S rRNA, ribosomal andribosome associated prote<strong>in</strong>s and with the NPC. Mutations <strong>in</strong> NPL3 lead toexport defects of the large subunit and genetic <strong>in</strong>teractions with other pre-60S export factors.YEV4-FGLocalization of mRNAs and endoplasmic reticulum <strong>in</strong> budd<strong>in</strong>gyeastJ. Fundakowski 1 , M. Schmid 2 , C. Genz 1 , S. Lange 2 , R.-P. Jansen* 11 Eberhard-Karls-Universität, Interfaculty Institute for Biochemistry, Tüb<strong>in</strong>gen,Germany2 Ludwig-Maximilians-Universität München, GeneCenter, Munich, GermanyLocalization of mRNAs contributes to generation and ma<strong>in</strong>tenance ofcellular asymmetry, embryonic development and neuronal function [1]. Itis a widely distributed process <strong>in</strong> s<strong>in</strong>gle-celled and multicellular eukaryotesbut has also been described for prokaryotes. In the budd<strong>in</strong>g yeastSaccharomyces cerevisiae, a m<strong>in</strong>imal prote<strong>in</strong> complex comprised of themyos<strong>in</strong> motor Myo4p, the RNA b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong> She2p, and the adapterand RNA b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong> She3p localizes >30 mRNAs to the bud tip [2].This set of mRNAs <strong>in</strong>cludes 13 mRNAs encod<strong>in</strong>g membrane or secretedprote<strong>in</strong>s. It has been observed that ribonucleoprote<strong>in</strong> (RNP) particlesconta<strong>in</strong><strong>in</strong>g one of these mRNAs can co-localize with tubular ER structures.Such ER tubules form the <strong>in</strong>itial elements for segregation of cortical ER(cER) [3]. Co-localization has therefore been suggested to illustrate acoord<strong>in</strong>ation of mRNA localization and cER distribution [4]. By<strong>in</strong>vestigat<strong>in</strong>g mRNA localization <strong>in</strong> yeast mutants defective <strong>in</strong> cERsegregation, we demonstrate that proper cER segregation is required forlocalization of a subset of mRNAs. These mRNAs are expressed at thetime of tubular ER movement <strong>in</strong>to the bud. Localization of ASH1 mRNAthat is expressed after tubular movement has ceased is not affected <strong>in</strong> anyof these mutants. Co-localization of RNPs and tubular ER depends on theRNA-b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong> She2p and requires its tetramerization. She2p canb<strong>in</strong>d to artificial, prote<strong>in</strong>-free liposomes <strong>in</strong> a membrane curvaturedependentmanner with a preference for small liposomes with a diameterresembl<strong>in</strong>g yeast ER tubules. In support of this f<strong>in</strong>d<strong>in</strong>g, loss of prote<strong>in</strong>srequired for tubule formation result <strong>in</strong> defective mRNA localization <strong>in</strong>vivo. Our results demonstrate that She2p is not only an RNA- but alsolipid-b<strong>in</strong>d<strong>in</strong>g prote<strong>in</strong> that recognizes membrane curvature, which makes itan ideal coord<strong>in</strong>ator of ER tubule and mRNA co-transport1. K. Mart<strong>in</strong> and A. Ephrussi, Cell136(2009), p. 719.2. G. Gonsalez, C.R. Urb<strong>in</strong>ati, and R.M. Long, Biol. Cell97 (2005), p. 75.3. Y. Du, S. Ferro-Novick, and P. Novick, J. Cell Sci.117(2004), p. 2871.4. M. Schmid, A. Jaedicke, T.-G. Du, and R.-P. Jansen, Curr. Biol16(2006), p. 1538.YEV5-FGEukaryotic Ribosome Biogenesis: Analysis of the NucleolarEssential Yeast Nep1 Prote<strong>in</strong> and Mutations Caus<strong>in</strong>g theHuman Bowen-Conradi SyndromeK.-D. Entian*, B. MeyerJohann Wolfgang Goethe University, Cluster of Excellence: MacromolecularComplexes and Institute for Molecular Biosciences, Frankfurt a.M., GermanyIn eukaryotes, ribosome biogenesis needs the coord<strong>in</strong>ated <strong>in</strong>teraction ofrRNAs and prote<strong>in</strong>s. We identified the Nep1 (Emg1) prote<strong>in</strong> family as anessential prote<strong>in</strong> <strong>in</strong>volved <strong>in</strong> ribosome biogenesis. The yeast and thehuman Nep1 prote<strong>in</strong>s are localized <strong>in</strong> the nucleolus and the humanHsNep1 can complement the Nep1 function <strong>in</strong> a yeast nep1 mutant.A mutation which abolished the yeast Nep1 RNA b<strong>in</strong>d<strong>in</strong>g was responsiblefor the human Bown-Conradi-Syndrome (BCS) which causes early childdeath. Analysis of yeast and human mutations showed that the mutatedprote<strong>in</strong>s lost their nucleolar location and their RNA-b<strong>in</strong>d<strong>in</strong>g activity.Structure analysis of the Nep1 prote<strong>in</strong> suggested its function as a methyltransferase and, recently, we could confirm that Nep1 methylated 1191 <strong>in</strong>the decod<strong>in</strong>g center of the 18S rRNA. Additionally, the Nep1 prote<strong>in</strong> has adual function <strong>in</strong> ribosome biogenesis and supports Rps19 assembly to thepre-ribosome.Buchhaupt et al. (2006) Mol. Genet. Genomics. 276: 273; Buchhaupt et al. (2007) FEMS Yeast Res.7: 771,. Eschrich et al. (2002) Curr. Genet. 40: 326; Taylor et al. (2007) NAR 36: 1542; Armisteadet al. (2009) Am. J. Hum. Genet. 84, 728;Wurm et al. (2010) NAR 38: 2387, Meyer et al.(2011)NAR39: 1524.YEV6-FGHigh-level production of tetraacetyl phytosph<strong>in</strong>gos<strong>in</strong>e (TAPS)by comb<strong>in</strong>ed genetic eng<strong>in</strong>eer<strong>in</strong>g of sph<strong>in</strong>goid basebiosynthesis and L-ser<strong>in</strong>e availability <strong>in</strong> the non-conventionalyeast Pichia ciferriiC. Schorsch, E. Boles*Johann Wolfgang Goethe University, Institute of Molecular Biosciences,Frankfurt a.M., GermanyThe non-conventional yeast Pichia ciferrii (formerly known as Hansenulaciferri) is the only known organism that is specialized <strong>in</strong> produc<strong>in</strong>g andsecret<strong>in</strong>g large quantities of tetraacetyl phytosph<strong>in</strong>gos<strong>in</strong>e (TAPS), a fullyacetylated form of the sph<strong>in</strong>golipid <strong>in</strong>termediate phytosph<strong>in</strong>gos<strong>in</strong>e.Because of its unique feature this yeast is an attractive microorganism forthe <strong>in</strong>dustrial production of TAPS. Sph<strong>in</strong>golipids are important <strong>in</strong>gredients<strong>in</strong> cosmetic applications and formulations. They play important roles <strong>in</strong>human stratum corneum as they are <strong>in</strong>volved <strong>in</strong> sk<strong>in</strong> permeability andantimicrobial barrier homeostatic functions.Our work aimed to improve TAPS production by genetic eng<strong>in</strong>eer<strong>in</strong>g of P.ciferrii. In a first step, we could <strong>in</strong>crease TAPS production by improv<strong>in</strong>gprecursor availability. This was achieved by block<strong>in</strong>g degradation of L-ser<strong>in</strong>e which - <strong>in</strong> the first committed step of sph<strong>in</strong>golipid biosynthesis - iscondensed with palmitoyl-CoA by ser<strong>in</strong>e palmitoyltransferase. Moreover,genetic eng<strong>in</strong>eer<strong>in</strong>g of the sph<strong>in</strong>golipid pathway further <strong>in</strong>creasedsecretion of TAPS considerably. The f<strong>in</strong>al recomb<strong>in</strong>ant P. ciferrii stra<strong>in</strong>produced up to 199 mg (TAPS) * g -1 (cdw) with a maximal production rate of8.42 mg * OD 600nm -1 * h -1 and a titer of about 2 g * L -1 , and should beapplicable for <strong>in</strong>dustrial TAPS production.We would like to thank Evonik Industries and the German FederalM<strong>in</strong>istry of Education and Research (Bundesm<strong>in</strong>isterium für Bildung undForschung, BMBF; Bio<strong>in</strong>dustrie 2021, “FerDi”) for support.BIOspektrum | Tagungsband <strong>2012</strong>
239YEV7-FGThe genetics of ester synthesis <strong>in</strong> Hanseniaspora uvarumdur<strong>in</strong>g w<strong>in</strong>emak<strong>in</strong>gS. Fischer 1 , E. Sieber 2 , Z. Zhang 2 , J. He<strong>in</strong>isch 3 , C. von Wallbrunn* 11 Geisenheim Research Center, Department of Microbiology andBiochemistry, Geisenheim, Germany2 Hochschule Rhe<strong>in</strong>Ma<strong>in</strong>, Fachbereich Geisenheim, Geisenheim, Germany3 University of Osnabrück, Department of Genetics, Faculty of Biology,Osnabrück, GermanyIt is well known that the so called Non-Saccharomycetes have a strong<strong>in</strong>fluence on the chemical composition and the sensorical quality of w<strong>in</strong>es.Hanseniaspora uvarum is a common yeast found <strong>in</strong> the early stages ofspontaneous w<strong>in</strong>e fermentations but also sometimes <strong>in</strong> starter cultures<strong>in</strong>oculated fermentations. Depend<strong>in</strong>g on the phytosanitary status of thegrapes <strong>in</strong> a v<strong>in</strong>eyard dur<strong>in</strong>g ripen<strong>in</strong>g up to 90% of a yeast population at thebeg<strong>in</strong>n<strong>in</strong>g of fermentation can belong to this species. In some cases,fermentations with stra<strong>in</strong>s of this organism show <strong>in</strong>terest<strong>in</strong>gly positivebouquets affected by positive esters flavours. But it is also known thatfermentations with high amounts of H. uvarum dur<strong>in</strong>g the beg<strong>in</strong>n<strong>in</strong>g canbe characterized by high amounts of acidic acid and the result<strong>in</strong>g ethylacetate ester, both typical off flavours <strong>in</strong> w<strong>in</strong>e.The composition and pH of musts, availability of nutrients for yeastgrowth, the temperature dur<strong>in</strong>g fermentation and viticultural andoenological methods are parameters which can <strong>in</strong>fluence differentpathways of the yeast metabolism <strong>in</strong>volved <strong>in</strong> the production of flavoursand aromas, for example esters (Lilly et al., 2000)In S. cerevisiae, esters are produced by two alcohol acyltransferases ATF1and ATF2 and an acyl-coenzyme A: ethanol O-acyltransferase EEB1.These enzymes and genes are well characterized.The question is <strong>in</strong> which metabolic pathway(s) are esters produced by H.uvarum and how potential genes are regulated to show the formerlydescribed observations concern<strong>in</strong>g the ester production <strong>in</strong> a positive ornegative way.In contrast to S. cerevisiae genomic data of H. uvarum were not availableso far. In a cooperation project with J. He<strong>in</strong>isch, Department of Genetics,University of Osnabrück, a type stra<strong>in</strong> was sequenced. Us<strong>in</strong>g thesesequences possible candidates of ATF and EEB genes <strong>in</strong> H. uvarum wereidentified. Derived primers were used to amplify these genes by PCR. ThePCR products were characterized by sequenc<strong>in</strong>g and cloned <strong>in</strong> E. coli. Onepart of the work was to reconstitute the correspond<strong>in</strong>g EuroScarf knockout-mutantsand aftergrape must fermentations the ester formation byanalyzed by GC-MS. Another part of this work was to observe underwhich conditions high amounts of several ester compounds are produced.The next steps will be the development of an efficient transformationprotocol, the generation of knock-out and over expression mutants and theanalysis of the promotor sequences.1. M. Lilly, M.G. Lambrechts, I.S. Pretorius, Yeast 23 (2000), p. 641-659YEV8-FGFeel me, thrill me, kill me - when K. lactis meets S. cerevisiaeR. Schaffrath* 1,2 , C. Bär 1,2 , D. Jablonowski 1,21 Universität Kassel, Institut für Biologie, Abteilung Mikrobiologie, Kassel,Germany2 University of Leicester, Department of Genetics, Leicester, GermanyRecent studies have shown that transfer RNAs (tRNAs) are not onlyessential for decod<strong>in</strong>g messenger RNAs (mRNAs) but also serve aspathorelevant targets for microbial endoribonuclease tox<strong>in</strong>s (ribotox<strong>in</strong>s)from bacteria, yeast and fungi that cleave with<strong>in</strong> tRNA anticodons andthereby <strong>in</strong>hibit growth of sensitive target cells. Strik<strong>in</strong>gly, these tRNaseribotox<strong>in</strong>s ensure survival of their producers aga<strong>in</strong>st other microbialcompetitors <strong>in</strong> the same ecological niche and often, their attacks on tRNAslead to cell death by way of tRNA depletion. Antifungal tRNase ribotox<strong>in</strong>s<strong>in</strong>clude the zymoc<strong>in</strong> complex from dairy yeast Kluyveromyces lactis whichkills sensitive cells of baker’s yeast Saccharomyces cerevisiae.Intrigu<strong>in</strong>gly, zymoc<strong>in</strong>’s tRNase activity targets tRNA species that possessspecific nucleobase modifications at their anticodon wobble position andthese modifications are functionally conserved among prokaryal andeukaryal organisms. Therefore, our idea was to take the basic biology oftRNase ribotox<strong>in</strong>s and apply this to cell systems, <strong>in</strong>clud<strong>in</strong>g HeLa tumourcells, whose proliferation heavily relies on proper tRNA functions <strong>in</strong>mRNA translation and de novo prote<strong>in</strong> synthesis. Our pilot f<strong>in</strong>d<strong>in</strong>gs<strong>in</strong>dicate that expression of the zymoc<strong>in</strong> tRNase from K. lactis not onlykills sensitive cells of S. cerevisiae but also affects the growth and viabilityof higher eukaryal cells <strong>in</strong>clud<strong>in</strong>g plants and mammals. Hence, weconclude and propose <strong>in</strong> this session that microbial tRNase ribotox<strong>in</strong>s maybe <strong>in</strong>voked as novel anti-proliferative factors for biomedical oragrobiological <strong>in</strong>tervention schemes [1].1. Support of the work to RS by funds from the alumni programme of the Alexander von Humboldtfoundation, Bonn, Germany, Department of Genetics, University of Leicester, UK, theBiotechnology and Biological Sciences Research Council, UK (grant BB/F019106/1) andUniversität Kassel, Germany, is greatly acknowledged.BIOspektrum | Tagungsband <strong>2012</strong>
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Instruments that are music to your
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General Information2012 Annual Conf
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SPONSORS & EXHIBITORS9Sponsoren und
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13BIOspektrum | Tagungsband 2012
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16 AUS DEN FACHGRUPPEN DER VAAMFach
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22 AUS DEN FACHGRUPPEN DER VAAMMitg
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24 INSTITUTSPORTRAITin the differen
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26 INSTITUTSPORTRAITProf. Dr. Lutz
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28 CONFERENCE PROGRAMME | OVERVIEWS
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30 CONFERENCE PROGRAMME | OVERVIEWT
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32 CONFERENCE PROGRAMMECONFERENCE P
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34 CONFERENCE PROGRAMMECONFERENCE P
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38 SPECIAL GROUPSACTIVITIES OF THE
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40 SPECIAL GROUPSACTIVITIES OF THE
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42 SHORT LECTURESMonday, March 19,
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44 SHORT LECTURESMonday, March 19,
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46 SHORT LECTURESTuesday, March 20,
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48 SHORT LECTURESWednesday, March 2
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50 SHORT LECTURESWednesday, March 2
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52ISV01Die verborgene Welt der Bakt
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54protein is reversibly uridylylate
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56that this trapping depends on the
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58Here, multiple parameters were an
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60BDP016The paryphoplasm of Plancto
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62of A-PG was found responsible for
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64CEV012Synthetic analysis of the a
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66CEP004Investigation on the subcel
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68CEP013Role of RodA in Staphylococ
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70MurNAc-L-Ala-D-Glu-LL-Dap-D-Ala-D
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72CEP032Yeast mitochondria as a mod
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74as health problem due to the alle
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76[3]. In summary, hypoxia has a st
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78This different behavior challenge
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80FUP008Asc1p’s role in MAP-kinas
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82FUP018FbFP as an Oxygen-Independe
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84defence enzymes, were found to be
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86DNA was extracted and shotgun seq
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88laboratory conditions the non-car
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90MEV003Biosynthesis of class III l
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92provide an insight into the regul
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94MEP007Identification and toxigeni
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96various carotenoids instead of de
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98MEP025Regulation of pristinamycin
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100that the genes for AOH polyketid
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102Knoll, C., du Toit, M., Schnell,
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104pathogenicity of NDM- and non-ND
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106MPV013Bartonella henselae adhesi
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108Yfi regulatory system. YfiBNR is
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110identification of Staphylococcus
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112that a unit increase in water te
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114MPP020Induction of the NF-kb sig
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116[3] Liu, C. et al., 2010. Adhesi
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118virulence provides novel targets
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120proteins are excreted. On the co
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122MPP054BopC is a type III secreti
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124MPP062Invasiveness of Salmonella
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126Finally, selected strains were c
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128interactions. Taken together, ou
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130forS. Typhimurium. Uncovering th
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132understand the exact role of Fla
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134heterotrimeric, Rrp4- and Csl4-c
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136OTV024Induction of systemic resi
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13816S rRNA genes was applied to ac
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140membrane permeability of 390Lh -
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142bacteria in situ, we used 16S rR
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144bacteria were resistant to acid,
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1461. Ye, L.D., Schilhabel, A., Bar
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148using real-time PCR. Activity me
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150When Ms. mazei pWM321-p1687-uidA
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152OTP065The role of GvpM in gas ve
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154OTP074Comparison of Faecal Cultu
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156OTP084The Use of GFP-GvpE fusion
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158compared to 20 ºC. An increase
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160characterised this plasmid in de
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162Streptomyces sp. strain FLA show
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164The study results indicated that
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166have shown direct evidences, for
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168biosurfactant. The putative lipo
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170the absence of legally mandated
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172where lowest concentrations were
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174PSV008Physiological effects of d
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176of pH i in vivo using the pH sen
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178PSP010Crystal structure of the e
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180PSP018Screening for genes of Sta
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182In order to overproduce all enzy
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184substrate specific expression of
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186potential active site region. We
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- Page 253 and 254: 253Anna-Katharina Wagner: Regulatio
- Page 255 and 256: 255Vera Bockemühl: Produktioneiner
- Page 257 and 258: 257Meike Ammon: Analyse der subzell
- Page 259 and 260: springer-spektrum.deDas große neue