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VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

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230SSP006Initial proteome analysis of a novel Antarctic haloarchaeal biofilmG. Losensky* 1 , M. Dyall-Smith 2 , F. Pfeifer 1 , S. Fröls 11 Technische Universität Darmstadt, Institut für Mikrobiologie und Genetik,Darmstadt, Germany2 Charles Sturt University, School of Biomedical Sciences, Wagga Wagga,AustraliaAlthough biofilm formation is the predom<strong>in</strong>ant modus vivendi ofmicroorganisms <strong>in</strong> nature it is only poorly characterized <strong>in</strong> terms ofarchaea. It was recently shown that several haloarchaea are able to adhereto surfaces and form biofilms. S<strong>in</strong>ce the underly<strong>in</strong>g mechanisms are stillunknown we used a proteomic approach for an <strong>in</strong>itial <strong>in</strong>vestigation offactors <strong>in</strong>volved <strong>in</strong> biofilm formation of the novel Antarctic isolate t-ADLDL24 which is able to form densely packed multilayer biofilms.Static liquid cultures of t-ADL DL24 were cultivated for 28 days <strong>in</strong> petridishes before planktonic and adherent cells were harvested separately.Cytoplasmic and membrane fractions were separated by sedimentation.Comparative prote<strong>in</strong> analysis us<strong>in</strong>g SDS-PAGE yielded differential prote<strong>in</strong>patterns for planktonic and adherent cells. MS-analyses were performed toidentify the prote<strong>in</strong> sets of both phenotypes. Altogether 801 differentprote<strong>in</strong>s were identified <strong>in</strong> cytoplasmic and membrane fractions ofadherent cells, correspond<strong>in</strong>g to 23 % of the predicted ORFs, whereas atotal of 678 prote<strong>in</strong>s were detected <strong>in</strong> planktonic cells (20 %). While anoverlap of 573 prote<strong>in</strong>s was found <strong>in</strong> both phenotypes, 228 Prote<strong>in</strong>s weresolely detected <strong>in</strong> adherent cells and 105 prote<strong>in</strong>s were associated withplanktonic lifestyle. Categorisation of the phenotype specific prote<strong>in</strong>saccord<strong>in</strong>g to their cluster of orthologous groups of prote<strong>in</strong>s (COG)provided first <strong>in</strong>sights <strong>in</strong>to the biological processes contribut<strong>in</strong>g to biofilmformation of t-ADL DL24. Evidence for an adjustment of energymetabolism <strong>in</strong> biofilm cells was found, especially prote<strong>in</strong>s <strong>in</strong>dicat<strong>in</strong>g achangeover from aerobic to anaerobic energy conversion and multipletransport prote<strong>in</strong>s. Concern<strong>in</strong>g <strong>in</strong>formation process<strong>in</strong>g a couple oftranscriptional activators as well as components of signal transductionsystems and stress responses were exclusively detected <strong>in</strong> adherent cells.Furthermore a number of biofilm specific prote<strong>in</strong>s related to cellularprocesses like synthesis of the cell envelope, type IV pili and biofilmmatrix were identified.The results of this first proteome analysis demonstrate that the biofilmlifestyle goes along with fundamental cellular rearrangements on theprote<strong>in</strong> level affect<strong>in</strong>g diverse biological processes <strong>in</strong> haloarchaea.SSP007The role of myo-<strong>in</strong>ositol-1-phosphate synthase <strong>in</strong> theadaptation of the thermoalkaliphile Caldalkalibacillusthermarum to supraoptimal temperatureF. Kalamorz* 1 , A. Carne 2 , G.M. Cook 31 Institute of Biology / Microbiology, Division of Molecular Microbiology,Halle (Saale), Germany2 Otago School of Medical Sciences, Department of Biochemistry, Duned<strong>in</strong>,NZ, New Zealand3 Otago School of Medical Sciences, Department of Microbiology andImmunology, Duned<strong>in</strong>, NZ, New ZealandMicroorganisms encounter rapid and dramatic changes <strong>in</strong> theirenvironment on a regular basis. One of the most likely and threaten<strong>in</strong>g ofthese changes is an <strong>in</strong>crease <strong>in</strong> temperature, impair<strong>in</strong>g prote<strong>in</strong> function,membrane and cell envelope <strong>in</strong>tegrity and the performance of chemicalprocesses. Bacteria have evolved several systems to counteract transientand persist<strong>in</strong>g <strong>in</strong>creases <strong>in</strong> temperatures, universally called the heat shockresponse for short term, transient mechanisms, and heat adaptation forprolonged survival at supraoptimal temperatures. We studied theadaptation of the thermoalkaliphile Caldalkalibacillus thermarum tosupraoptimal temperature. Cultures of C. thermarum <strong>in</strong>cuabted at theoptimal growth temperature of 60C and then exposed to the supraoptimaltemperature of 70C showed a significant <strong>in</strong>crease <strong>in</strong> the expression ofmetabolic enzymes, <strong>in</strong>clud<strong>in</strong>g a 256-fold <strong>in</strong>crease <strong>in</strong> myo-<strong>in</strong>ositol-1-phosphate synthase (mccI) prote<strong>in</strong> levels. This enzyme catalyzes theconversion of glucose-6-phosphate to myo-<strong>in</strong>ositol-1-phosphate and is<strong>in</strong>volved <strong>in</strong> the synthesis of the thermoprotectant di-myo-<strong>in</strong>ositol-1,3’-phosphate (DIP). The gene encod<strong>in</strong>g myo-<strong>in</strong>ositol-1-phosphate synthase <strong>in</strong>C. thermarum is part of the mccXIC operon encod<strong>in</strong>g a putative CDPalcoholphosphatidyltransferase (mccC), another enzyme of the DIPsynthesis pathway.A degenerated CIRCE element overlaps the start codon of mccX, and thek<strong>in</strong>etics of mccI <strong>in</strong>duction after exposure to 70C <strong>in</strong>dicate that this operonis regulated by HrcA, the negative regulator of class I heat shock response<strong>in</strong> Gram-positive bacteria.Further, expression of enzymes <strong>in</strong>volved <strong>in</strong> the degradation of myo<strong>in</strong>ositol-1-phosphateto D-glyceraldehyde 3-phosphate and acetyl-coA wasfound to be upregulated at 70C. At the same time, the activity ofphosphofructok<strong>in</strong>ase Pfk, an enzyme of the upper part of glycolysis,showed a 20-fold decrease. This suggests that exposure of C. thermarum tosupraoptimal temperature leads to a re-rout<strong>in</strong>g of glucose-6-phosphatefrom glycolysis <strong>in</strong>to <strong>in</strong>ositol synthesis and degradation.SSP008S-bacillithiolation protects aga<strong>in</strong>st hypochlorite stress <strong>in</strong> Bacillussubtilis as revealed by transcriptomics and redox proteomicsB. Khanh Chi* 1 , K. Gronau 1 , U. Mäder 2 , B. Hessl<strong>in</strong>g 1 , D. Becher 1 ,H. Antelmann 11 University of Greifswald, Institute for Microbiology, Greifswald, Germany2 University of Greifswald, Interfaculty Institute for Genetics and FunctionalGenomics, Greifswald, GermanyProte<strong>in</strong> S-thiolation is a post-translational thiol-modification that controlsredox-sens<strong>in</strong>g transcription factors and protects active site Cys residues ofessential enzymes aga<strong>in</strong>st irreversible overoxidation to sulfonic acids. InBacillus subtilis the MarR-type repressor OhrR was shown to senseorganic hydroperoxides via formation of mixed disulfides with the redoxbuffer bacillithiol (Cys-GlcN-Malate, BSH), termed as S-bacillithiolation[1]. We have studied changes <strong>in</strong> the transcriptome and redox proteomecaused by the strong oxidant hypochloric acid <strong>in</strong> B. subtilis [2]. Theexpression profile of NaOCl stress is <strong>in</strong>dicative of disulfide stress asshown by the <strong>in</strong>duction of the thiol- and oxidative stress-specific Spx,CtsR and PerR regulons. Thiol redox proteomics identified only fewcytoplasmic prote<strong>in</strong>s with reversible thiol-oxidations <strong>in</strong> response to NaOClstress that <strong>in</strong>clude GapA and MetE. Shotgun-LC-MS/MS analysesrevealed that GapA, Spx and PerR are oxidized to <strong>in</strong>tramoleculardisulfides by NaOCl stress. Furthermore, we identified six S-bacillithiolated prote<strong>in</strong>s <strong>in</strong> NaOCl-treated cells, <strong>in</strong>clud<strong>in</strong>g the OhrRrepressor, two methion<strong>in</strong>e synthases MetE and YxjG, the <strong>in</strong>organicpyrophosphatase PpaC, the 3-D-phosphoglycerate dehydrogenase SerAand the putative bacilliredox<strong>in</strong> YphP. S-bacillithiolation of the OhrRrepressor leads to up-regulation of the OhrA peroxiredox<strong>in</strong> that conferstogether with BSH specific protection aga<strong>in</strong>st NaOCl. S-bacillithiolation ofMetE, YxjG, PpaC and SerA causes hypochlorite-<strong>in</strong>duced methion<strong>in</strong>estarvation as supported by the <strong>in</strong>duction of the S-box regulon. Themechanism of S-glutathionylation of MetE has been described <strong>in</strong>Escherichia coli also lead<strong>in</strong>g to enzyme <strong>in</strong>activation and methion<strong>in</strong>eauxotrophy. In summary, our studies discover an important role of theBSH redox buffer <strong>in</strong> protection aga<strong>in</strong>st hypochloric acid by S-bacillithiolation of the redox-sens<strong>in</strong>g regulator OhrR and of key enzymesof the methion<strong>in</strong>e biosynthesis pathway.[1] Lee, J. W., Soonsanga, S., and Helmann, J. D. (2007) A complex thiolate switch regulatestheBacillus subtilisorganic peroxide sensor OhrR. Proc Natl Acad Sci U S A, 104, 8743-8748.[2] Chi BK, Gronau K, Mäder U, Hessl<strong>in</strong>g B, Becher D, Antelmann H. (2011)S-BacillithiolationProtects Aga<strong>in</strong>st Hypochlorite Stress <strong>in</strong>Bacillus subtilisas Revealed by Transcriptomics and RedoxProteomics. Mol Cell Proteomics 10, M111.009506.SSP009How bacteria take care of their kids: Evidence for controlledand fair distribution of PHB granules to daughter cells <strong>in</strong>Ralstonia eutropha H16D. Pfeiffer*, D. JendrossekInstitut für Mikrobiologie, Universität Stuttgart, Stuttgart, GermanyRalstonia eutropha H16 has become the model organism for study<strong>in</strong>gmetabolism of poly(3-hydroxybutyrate) (PHB), an importantbiodegradable biopolymer that is susta<strong>in</strong>able produced worldwide <strong>in</strong> thescale of 10 5 t/a from renewable resources such as sugars [1].R. eutrophacells usually accumulate about a dozen PHB granules dur<strong>in</strong>g growth athigh C/N-ratios. While biochemistry and molecular biology of PHBaccumulation and PHB biodegradation have been <strong>in</strong>vestigated <strong>in</strong> greatdetail dur<strong>in</strong>g the last two decades only little is known whether and howsubcellular localization of PHB granules is controlled by the bacteria. Weaddressed this question by perform<strong>in</strong>g a two-hybrid approach to screen forprote<strong>in</strong>s with the ability to <strong>in</strong>teract with prote<strong>in</strong>s of the PHB granulesurface [2,3]. Two novel Pha prote<strong>in</strong>s were identified which controlsubcellullar localization of PHB granules and ensure almost equaldistribution of PHB granules to daughter cells after cell division asrevealed by fluorescence microscopy and transmission electronmicroscopy. A revised model for PHB granule formation will be proposed.[1] Re<strong>in</strong>ecke, F., Ste<strong>in</strong>büchel, A. (2009). J. Mol. Microbiol. Biotechnol.16:91-108[2] Pfeiffer D., Jendrossek D. (2011).Microbiology.157:2795-807.[3] Pfeiffer D., Wahl A., Jendrossek D. (2011).Mol Microbiol.82:936-51.SSP010Food Safety: Is there a positive relationship between heatresistance and dehydration stress of <strong>in</strong>fant pathogen Cronobacter?S. Baumann, C. Hallo<strong>in</strong>, C. Heck, J. Rudat*Karlsruhe Institute of Technology (KIT), Chemical and ProcessEng<strong>in</strong>eer<strong>in</strong>g, Karlsruhe, GermanyCronobacter bacteria, formerly classified as Enterobacter sakazakii, havebeen implicated <strong>in</strong> several <strong>in</strong>cidents as the cause of men<strong>in</strong>gitis andenterocolitis with high mortality rates <strong>in</strong> premature <strong>in</strong>fants result<strong>in</strong>g fromBIOspektrum | Tagungsband <strong>2012</strong>

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