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VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

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172where lowest concentrations were recorded. Methane oxidation ratesmostly followed this pattern. Experiments simulat<strong>in</strong>g the mix<strong>in</strong>g offreshwater methanotrophic bacteria from the river with the sal<strong>in</strong>e waters ofthe Laptev Sea <strong>in</strong>dicate that at sal<strong>in</strong>ities above 5 PSU their function asbiofilter ends.OTP158Inhibition of the anaerobic degradation of ethylene glycol bybenzotriazolesD. Ilieva*, B. Morasch, S. Haderle<strong>in</strong>University of Tüb<strong>in</strong>gen, Center for Applied Geoscience (ZAG),Environmental M<strong>in</strong>eralogy & Chemistry, Tüb<strong>in</strong>gen, Germany1H-benzotriazole and its methylated derivative tolyltriazole belong to themost frequently used corrosion <strong>in</strong>hibitors <strong>in</strong> borehole heat exchangersystems.In case of a leakage, a local groundwater contam<strong>in</strong>ation mightoccur where ethylene glycol-based heat transfer fluid conta<strong>in</strong><strong>in</strong>g corrosion<strong>in</strong>hibitors enter the aquifer down to a depth of 150 meters. Microcosmexperiments with sediment <strong>in</strong>oculum showed that the two corrosion<strong>in</strong>hibitors are resistant to biodegradation under sulfate-, nitrate- and ironreduc<strong>in</strong>gconditions. This study describes the <strong>in</strong>hibitory effect ofbenzotriazoles on ethylene glycol degradation under nitrate- and sulfatereduc<strong>in</strong>gconditions.Experiments were conducted us<strong>in</strong>g a sediment <strong>in</strong>oculum from a depth of60 meters, which was sampled dur<strong>in</strong>g the <strong>in</strong>stallation of a borehole heatexchanger system. The biodegradation of ethylene glycol (5 mM) wasassessed as the sole carbon source and <strong>in</strong> the presence of (50 M) of eachof the benzotriazoles. Microcosm experiments were performed <strong>in</strong> triplicateat 12°C and room temperature (RT).In the absence of benzotriazoles more than 98 % of the <strong>in</strong>itial ethyleneglycol was degraded with<strong>in</strong> eight days by the denitrify<strong>in</strong>g bacteria. In thepresence of the two corrosion <strong>in</strong>hibitors the degradation of ethylene glycolproceeded at a lower rate and 98 % of the substrate were not degradeduntil 15 days of <strong>in</strong>cubation. Under sulfate-reduc<strong>in</strong>g conditions 50-100% ofthe <strong>in</strong>itial ethylene glycol concentration was utilized with<strong>in</strong> 138 days of<strong>in</strong>cubation <strong>in</strong> the absence of benzotriazoles. The presence of 1H-Benzotriazole caused <strong>in</strong>hibition of the biodegradation of ethylene glycol atlower temperatures. In the presence of tolyltriazole the effect on theethylene glycol degradation was variable, which might be expla<strong>in</strong>ed by theheterogeneous distribution of microorganisms <strong>in</strong> the <strong>in</strong>oculum.These f<strong>in</strong>d<strong>in</strong>gs <strong>in</strong>dicate that benzotriazoles may not only threatengroundwater quality due to their own toxicities but <strong>in</strong> addition <strong>in</strong>hibit thebiodegradation of other organic compounds.PSV001The unusual cell architecture of I. hospitalis and consequencesfor its energy metabolismL. Kreuter* 1 , S. Daxer 1 , U. Küper 1 , F. Mayer 2 , V. Müller 2 , R. Rachel 3 ,H. Huber 11 Universität Regensburg, Lehrstuhl für Mikrobiologie, Regensburg, Germany2 Goethe-Universität, Institut für Molekulare Biowissenschaften, Frankfurt/Ma<strong>in</strong>, Germany3 Universiät Regensburg, Zentrum für Elektronenmikroskopie der Fakultät fürBiologie und Vorkl<strong>in</strong>ische Mediz<strong>in</strong>, Regensburg, GermanyThe members of the genus Ignicoccus belong to the phylum of theCrenarchaeota. They obta<strong>in</strong> energy chemolithoautotrophically by thereduction of elemental sulfur with molecular hydrogen as electron donor(1). All described Ignicoccus species exhibit a unique cell architecture thatdiffers from all other Archaea known so far. The cell envelope consists oftwo membranes enclos<strong>in</strong>g a huge <strong>in</strong>ter-membrane compartment (IMC).Surpris<strong>in</strong>gly, it was shown for I. hospitalis that the outermost membraneconta<strong>in</strong>s the H 2:sulphur oxidoreductase as well as the ATP synthase. Thus,I. hospitalis is the first organism with an energized outermost membraneand ATP synthesis with<strong>in</strong> the IMC. DAPI sta<strong>in</strong><strong>in</strong>g and EM analysesshowed that DNA and ribosomes are localized <strong>in</strong> the cytoplasm, lead<strong>in</strong>g tothe conclusion that energy conservation is separated from <strong>in</strong>formationprocess<strong>in</strong>g and prote<strong>in</strong> biosynthesis (2). In addition, we were able todemonstrate that the acetyl-CoA synthetase that activates acetate to acetyl-CoA is associated to the outermost membrane. This is the first energyconsum<strong>in</strong>gprocess proven to take place <strong>in</strong> the <strong>in</strong>ter-membranecompartment.To further <strong>in</strong>vestigate the energy metabolism under these extraord<strong>in</strong>aryconditions, we are work<strong>in</strong>g on the purification and characterization of thecomplete ATP synthase complex of I. hospitalis. This <strong>in</strong>cludes studies onthe stability of the enzyme complex, its molecular composition, and itsbehaviour aga<strong>in</strong>st <strong>in</strong>hibitors. The f<strong>in</strong>d<strong>in</strong>gs of these experiments also willshed light on the nature of the <strong>in</strong>timate association between I. hospitalisand Nanoarchaeum equitans (3). It is known that N. equitans receivesam<strong>in</strong>o acids and lipids from its host. At present, it is still unclear if theenergy metabolism of N. equitans is dependent on I. hospitalis, too.F<strong>in</strong>ally, a re-exam<strong>in</strong>ation of the nomenclature of the differentcompartments and the two membranes of I. hospitalis will be discussed.(1) Paper W. et al. 2007 Int. J. Syst. Evol. Microbiol. 57:803-808(2) Kueper U. et al. 2010 PNAS 107: 3152-3156(3) Jahn U. et al. 2008 J. Bacteriol. 190: 1743-1750(4) This project is supported by a grant from the DFGPSV002Function and specificity of the dual flagellar sytem <strong>in</strong>Shewanella putrefaciens CN-32S. Bubendorfer* 1 , S. Held 1 , N. W<strong>in</strong>del 1 , A. Paulick 1 , A. Kl<strong>in</strong>gl 2 , K. Thormann 11 Max-Planck-Institut für terrestrische Mikrobiologie, Ecophysiology, Marburg,Germany2 Philipps-Universität Marburg, Cell Biology, Marburg, GermanyBacteria move towards favorable conditions by rotat<strong>in</strong>g helicalprote<strong>in</strong>aceous filaments, called flagella. The motor part of this <strong>in</strong>tricatebacterial nanomach<strong>in</strong>e <strong>in</strong>corporates stator units that exert torque on thefilament us<strong>in</strong>g gradients of H + - or Na + -ions. Stator units and the rotorcomponent FliM can be dynamically exchanged dur<strong>in</strong>g function. Previousstudies have shown that a large number of microorganisms harbor dualflagellar systems. However, little is known about function and regulationof dual flagellar systems <strong>in</strong> many species.The -proteobacterium Shewanella putrefaciens CN-32 possesses acomplete secondary flagellar system along with a correspond<strong>in</strong>g statorunit. In contrast to most secondary flagellar systems that have been studiedso far, expression already occurs dur<strong>in</strong>g planktonic growth <strong>in</strong> complexmedia and leads to the formation of a subpopulation with one or moreadditional flagella at random positions <strong>in</strong> addition to the primary polarsystem. We used physiological and phenotypic characterizations of def<strong>in</strong>edmutants <strong>in</strong> concert with fluorescent microscopy on labeled components ofthe two different systems, the stator prote<strong>in</strong>s PomB and MotB, the rotorcomponents FliM 1 and FliM 2,and the auxiliary motor components MotXand MotY, to determ<strong>in</strong>e localization and function of the prote<strong>in</strong>s <strong>in</strong> theflagellar motors.Our results demonstrate that the polar flagellum is driven by a Na + -dependent FliM 1/PomAB/MotX/MotY flagellar motor, while thesecondary motor is rotated by a H + -dependent FliM 2/MotAB motor. Thereis strong evidence that these components are highly specific for theircorrespond<strong>in</strong>g motor and are unlikely to be extensively swapped or sharedbetween the two flagellar systems under planktonic conditions. The resultshave implications for the specificity and dynamics of flagellar motorcomponents.PSV003Pyruvate formate-lyase Controls Formate Translocation bythe FocA ChannelC. Doberenz* 1 , L. Beyer 1 , D. Falke 1 , M. Zorn 2 , B. Thiemer 1 , G. Sawers 11 Mart<strong>in</strong>-Luther-University Halle, Biology/Microbiology AG Sawers, Halle,Germany2 Mart<strong>in</strong>-Luther-University Halle, Pharmacy AG S<strong>in</strong>z, Halle, GermanyFormate is one of the major products of mixed-acid fermentation <strong>in</strong>Enterobacteria such as Escherichia coli and is an important electron donorfor many anaerobes. Dur<strong>in</strong>g fermentation <strong>in</strong> E. coli up to one third of thecarbon derived from glucose is metabolized to formate. The f<strong>in</strong>al step iscatalyzed by the cytoplasmic enzyme pyruvate formate-lyase (PflB), whichcatalyses the homolytic cleavage of pyruvate to acetyl-CoA and formate.PflB is a glycyl-radical enzyme that is converted from an <strong>in</strong>active to anactive form by the radical-SAM enzyme PflA 1 .Because accumulation of formate <strong>in</strong>side the cell can lead to acidification ofthe cytoplasm a mechanism to regulate its <strong>in</strong>tracellular level must exist.FocA is a bidirectional formate channel prote<strong>in</strong> that belongs to the familyof formate-nitrite transporters (FNT) 2 . Its gene, focA, is co-transcribed withthat encod<strong>in</strong>g PflB. Although several structures of FocA have beenpublished recently 3 , there is still no clear mechanistic understand<strong>in</strong>g ofhow formate import and export by FocA is controlled. Because synthesisof FocA and PflB is highly coord<strong>in</strong>ated this suggested that PflB might playa key role <strong>in</strong> controll<strong>in</strong>g formate translocation across the cytoplasmicmembrane. In <strong>in</strong>itial experiments we could show a FocA-dependent<strong>in</strong>teraction of PflB with the cytoplasmic membrane. The specificity of theFocA-PflB <strong>in</strong>teraction could be subsequently confirmed us<strong>in</strong>g a variety of<strong>in</strong> vivo and <strong>in</strong> vitro experimental approaches. Our f<strong>in</strong>d<strong>in</strong>gs <strong>in</strong>dicate that itis the <strong>in</strong>active form of PflB that <strong>in</strong>teracts with FocA. Based on thesef<strong>in</strong>d<strong>in</strong>gs we developed an assay to test our model for PflB-controlledgat<strong>in</strong>g of formate transport by FocA <strong>in</strong> vivo.1 Sawers RG & Clark DP (2004) Fermentative pyruvate and acetyl CoA metabolism. Chapter 3.5.3. EcoSal -Escherichia coli and Salmonella: Cellular and Molecular Biology (Curtiss R III, (Editor <strong>in</strong> Chief) ASMPress, Wash<strong>in</strong>gton, DC.2 Suppmann B & Sawers G (1994) Isolation and characterization of hypophosphite-resistant mutants ofEscherichia coli: identification of the FocA prote<strong>in</strong>, encoded by the pfl operon, as a putative formatetransporter. Mol Microbiol 11: 965-982.3 Wang et al., (2009) Structure of the formate transporter FocA reveals a pentameric aquapor<strong>in</strong>-like channel.Nature vol. 462 (7272) pp. 467-472;Waight et al., (2010) Structure and mechanism of a pentameric formate channel. Nat Struct Mol Biol 17, 31-37.;Lü et al., (2011) pH-Dependent Gat<strong>in</strong>g <strong>in</strong> a FocA Formate Channel. Science vol. 332 (6027) pp. 352-354BIOspektrum | Tagungsband <strong>2012</strong>

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