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VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

VAAM-Jahrestagung 2012 18.–21. März in Tübingen

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86DNA was extracted and shotgun sequenced us<strong>in</strong>g the SOLiD technique tostudy the composition of the <strong>in</strong>test<strong>in</strong>al microbiota and the exist<strong>in</strong>gmicrobial metabolism. By analyz<strong>in</strong>g the data us<strong>in</strong>g BLASTX aga<strong>in</strong>st theNR database and MEGAN we found that the microbiota composition of16S rRNA gene sequences obta<strong>in</strong>ed us<strong>in</strong>g Sanger sequenc<strong>in</strong>g and SOLiDsequenc<strong>in</strong>g provide comparable results. However, with SOLiD sequenceswe obta<strong>in</strong>ed more resolution down to the species level. In addition, withthe shotgun data we are able to identify the functional profile us<strong>in</strong>g SEEDand KEGG.This study shows that SOLiD mate-pair sequenc<strong>in</strong>g is a viable and costefficient option for analyz<strong>in</strong>g a complex microbiome. To the best of ourknowledge, this is the first time that SOLiD sequenc<strong>in</strong>g has been used <strong>in</strong>such a study.HMV004Bacterioc<strong>in</strong> production of staphylococcal nasal isolatesD. Janek*, B. Krismer, A. PeschelUnikl<strong>in</strong>ik Tüb<strong>in</strong>gen, Mediz<strong>in</strong>ische Mikrobiologie, Tüb<strong>in</strong>gen, GermanyStaphylococcus aureus is a major pathogen <strong>in</strong> hospital- and communityacquired<strong>in</strong>fections. Colonisation of the anterior nares <strong>in</strong> about 30% of thepopulation is a major risk factor for S. aureus <strong>in</strong>fections. Recently thecomposition of the nasal flora has been <strong>in</strong>verstigated. Interest<strong>in</strong>gly, thebacterial diversity <strong>in</strong> the human nose reaches from aerobic to strictlyanaerobic bacteria. The most frequently occurr<strong>in</strong>g species areCorynebacterium accolens/ C. macg<strong>in</strong>leyi, S. epidermidis andPropionibacterium acnes. In order to <strong>in</strong>vestigate if bacterioc<strong>in</strong> productionmight play a role dur<strong>in</strong>g nasal colonisation, we analysed the bacterioc<strong>in</strong>production of nasal Staphylococcus stra<strong>in</strong>s.The test-stra<strong>in</strong>s were casted <strong>in</strong> an agar plate and the nasal isolates werestamped on the plate. Various isolates showed growth <strong>in</strong>hibition zones ofthe test-stra<strong>in</strong>s. Transposon plasmids could be transformed <strong>in</strong>to variousstra<strong>in</strong>s and mutagenesis was performed.Analysis of 93 stapylococcal nasal isolates offered that various stra<strong>in</strong>sproduce bacterioc<strong>in</strong>s aga<strong>in</strong>st Micrococcus luteus and other nasal bacteria(S. aureus, Corynebacteria, Moraxella, Propionibacteria…).Thebacterioc<strong>in</strong> production of some nasal isolates turned out to be <strong>in</strong>ducible byhydrogen peroxide or iron limitation.One of these bacterioc<strong>in</strong>s, produced by an S. epidermidis stra<strong>in</strong>, could becharacterized as a Nukac<strong>in</strong>-like lantibiotic with activity aga<strong>in</strong>stMicrococcos luteus, Moraxella catarrhalis, Streptococcus pyogenes andCorynebacterium pseudodiphtheriticum.Knowledge about the various <strong>in</strong>teractions between staphylococcal andother nasal isolates could be important for effective S. aureus controlstrategies.HMP001Microbiological air quality <strong>in</strong> the hospital environments of twomajor hospitals <strong>in</strong> Ben<strong>in</strong> City metropolis, Edo State, NigeriaF.O. Ekhaise*University of Ben<strong>in</strong>, Microbiology, Ben<strong>in</strong>, NigeriaWe spend most of our lives <strong>in</strong> different <strong>in</strong>door environments, <strong>in</strong> homes,day-care facilities, schools and workplaces and we are constantly be<strong>in</strong>gchallenged by the microbial contents of these environments. It becameimperative to undertake a study of the microbiological air quality of theairborne microflora <strong>in</strong> the environments of two major government ownedhospitals (University of Ben<strong>in</strong> Teach<strong>in</strong>g Hospital, (UBTH) and CentralHospital) <strong>in</strong> Ben<strong>in</strong> City metropolis. The air samples were sampled everymonth for the three (3) months <strong>in</strong> the wet season (June - August, 2010) andthree (3) months of the dry season (November 2010 - January 2011) us<strong>in</strong>gthe settled plate methods. The study sites were divided <strong>in</strong>to n<strong>in</strong>e unitswhich <strong>in</strong>cludes Accident and Emergency Ward, Laboratory, Male ward,Female Ward, Children Ward, Labour Room, Treatment Room, Theatreand outside the hospital gate. The mean airborne bacterial load <strong>in</strong> the twohospitals ranges from 8.5cfu/m<strong>in</strong> to 172.5cfu/m<strong>in</strong> and 5.5cfu/m<strong>in</strong> to64.5cfu/m<strong>in</strong> for UBTH and Central hospital <strong>in</strong> the wet season. While themean airborne fungal load <strong>in</strong> UBTH and Central hospital <strong>in</strong> dry seasonranges from 2.5cfu/m<strong>in</strong> to 9.5cfu/m<strong>in</strong> and 1.5cfu/m<strong>in</strong> to 19.0cfu/m<strong>in</strong>respectively. The female ward, children ward, accident and emergencyward and outside the hospital gate were recognized to record the highestairborne microflora. The result revealed the isolation of ten (10) fungalairborne isolates and six (6) airborne bacterial isolates. These <strong>in</strong>cludes,Aspergillus niger, Aspergillus flavus, Botryodiplodia acer<strong>in</strong>a, Rhizopusstolonifer, Nigospora zimm, Mucor sp., Monilla <strong>in</strong>fuscans, Penicillium sp.,Candida sp. and Trichoderma viridis, while the six (6) bacterial isolates<strong>in</strong>cludes Staphylococcus aureus, Staphylococcus epidermidis, Bacilluscereus, Bacillus sp., Serratia marcescens and Micrococcus sp. The resultshows the highest fungal population of 26.5cfu/m<strong>in</strong> (Outside environment)<strong>in</strong> UBTH followed by 24.0cfu/m<strong>in</strong> (Outside environment) <strong>in</strong> CentralHospital. The highest bacterial population of 172.5cfu/m<strong>in</strong> (outsideenvironment) was recorded <strong>in</strong> UBTH. The fungal isolates Aspergillusniger (53.0%) and Monilla <strong>in</strong>fuscans (43.9%) were showed to be the mostfrequently isolated airborne fungal isolates while Staphylococcus aureus(91.3%) and Staphylococcus epidermidis (85.8%) were the mostfrequently isolated airborne bacterial isolates. The Statistical analysisshowed no significant difference between the values obta<strong>in</strong>ed dur<strong>in</strong>g thewet and dry seasons <strong>in</strong> both hospitals studied. KEYWORD: Airbornemicroflora, bacteria, fungi, hospital environment, time and bioaerosols.HMP002Unusual Multi organ presentation of Hydatid cystY. Hashemi Aghdam* 1 , V. Montazeri 2 , R. Azhough 2 , H. Farajkhah 2 ,*A. Moradi 2 , M. Naghavi Behzad 3 , S. Rahimi 4 , *F. golch<strong>in</strong> 41 Islamic Azad University, Medical Faculty, Young Researchers Club, TabrizBranch, Tabriz, Islamic Republic of Iran2 Tabriz University of Medical Sciences, Medical Faculty, Tabriz, IslamicRepublic of Iran3 Tabriz University of Medical Sciences, Medical Faculty, Student ResearchCommittee, Tabriz, Islamic Republic of Iran4 Islamic Azad University, Medical Faculty, Tabriz, Islamic Republic of IranIntroduction: Hydatidosis is a common problem all over the world.Hydatid cysts could be formed <strong>in</strong> all parts of human body except hair andnail that there is no blood. The prevalence of this disease is higher <strong>in</strong>children rather than adults. Risk of <strong>in</strong>fection depends on sanitation and itcould be prevented easily. The ultimate treatment is surgery but recurrentrate can be decreased by adm<strong>in</strong>ister<strong>in</strong>g medical treatment <strong>in</strong> thepreoperative and post operative periods.Case Report: A 35 year's old female patient presented with cough,purulent production and dyspnea. In computerized tomographic scan (CTscan) numerous cysts were observed <strong>in</strong> chest, abdomen and paravertebralmuscles. Because of cysts were ruptured, surgical <strong>in</strong>tervention wasplanned for thoracic lesions without prior antiparasitic medical treatment.The patient had no complications <strong>in</strong> short- term follow up.Discussion: Hydatid cyst is a parasitic disease which is known from thetime of Hippocrates. Infection will occur by eat<strong>in</strong>g vegetablescontam<strong>in</strong>ated with eggs of this parasite or contam<strong>in</strong>ated viscera ofherbivores and parasite larvae form cyst <strong>in</strong> human body. The <strong>in</strong>fectedperson is <strong>in</strong> risk of pneumocysis, pleural effusion, pneumothorax,secondary Ech<strong>in</strong>ococcus <strong>in</strong> pleural and peritoneal cavities and muscles<strong>in</strong>volvement. In our case there was platysma Dorsey and abdom<strong>in</strong>almuscle <strong>in</strong>volvement that there was no problem despite of dorsal andpleural cysts rupture, fortunately. Another <strong>in</strong>terest<strong>in</strong>g po<strong>in</strong>t <strong>in</strong> this case wasthat, there was no relation between pleural and dorsal muscle cysts.Generally observance of basic pr<strong>in</strong>ciples of health such as wash<strong>in</strong>g handswith soap after garden<strong>in</strong>g or contact with dogs and also wash<strong>in</strong>gvegetables that could be contam<strong>in</strong>ated with dog feces are very importantpo<strong>in</strong>ts prevent<strong>in</strong>g these diseases. However this disease could be curedeasily by surgery, if surgery is conducted after tak<strong>in</strong>g a short course ofAlbendazole and Mebendazole, the efficacy of surgical treatment will bebetter.HMP003Relationship among chlamydia pneumoniae <strong>in</strong>fection,atherosclerosis and expectancy of coronary artery diseaseY. Hashemi Aghdam* 1 , S. Rahimi 2 , A. Moradi* 3 , R. Ghassemi Nezhad* 4 ,F. Gholch<strong>in</strong>* 2 , M. Naghavi Behzad 51 Islamic Azad University, Medical Faculty, Young Researchers Club, TabrizBranch, Tabriz, Islamic Republic of Iran2 Islamic Azad University, Medical Faculty, Tabriz, Islamic Republic of Iran3 Tabriz University of Medical Sciences, Medical Faculty, Tabriz, IslamicRepublic of Iran4 Student of Azerbaijan Medical University, Dentistry Faculty, Baku, IslamicRepublic of Iran5 Tabriz University of Medical Sciences, Medical Faculty, Student ResearchCommittee, Tabriz, Islamic Republic of IranIntroduction: Coronary artery disease (CAD) is the lead<strong>in</strong>g cause of death<strong>in</strong> many countries. The underly<strong>in</strong>g mechanism of the chronic <strong>in</strong>flammatoryprocess <strong>in</strong> atherosclerosis is still unknown (1). But, the risk for coronaryevents may rise dur<strong>in</strong>g acute <strong>in</strong>fection (2). There are f<strong>in</strong>d<strong>in</strong>gs suggest<strong>in</strong>gthe <strong>in</strong>flammatory and immunogenic nature of the atherosclerosis (3). It iscurrently unclear what causes the chronic <strong>in</strong>flammation with<strong>in</strong>atherosclerotic plaques. One emerg<strong>in</strong>g paradigm suggests that <strong>in</strong>fectionwith bacteria and/or viruses can contribute to the pathogenesis ofatherosclerosis (4). Chronic Chlamydia pneumoniea <strong>in</strong>fection has recentlybeen associated with atherosclerosis. The aim of this study was to<strong>in</strong>vestigate the association of Chlamydia pneumoniea <strong>in</strong>fection, Ischemicheart disease (IHD) and atherosclerosis.Material and Method: 86 patients with background of recent IschemicHeart Disease, referred to Shahid Madani hospital of Tabriz from January2010- January 2011 were studied. Different blood samples were taken toassess the lipid profile and other tests. Blood culture was done andTriglyceride, High-Density Lipoprote<strong>in</strong> (HDL), Low density Lipoprote<strong>in</strong>(LDL), IgG and IgA antibodies aga<strong>in</strong>st Chlamydia Pneumoniea wereBIOspektrum | Tagungsband <strong>2012</strong>

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