Windows QTL Cartographer 2.5 - FTP Directory Listing

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50 Windows QTL Cartographer 2.5 Please notice that the buttons in this dialog is depend on the selections of previous dialog. For marker genotype information, use Browse button to indicate the filename and Send Data button to update the Data-Window. It is same for the trait value also. The Browse and Send Data button will be disabled if there is no other trait, Otherwise, you can do the same as trait value. Only one set of Browse and Send data button will be enabled if you choose one data file format in the previous dialog. Note: The Data file's format should be comparable with the setting of previous dialog. For example, if there is no individual label in the genotype data file and you check the include individual labels button in previous dialog. Then a warning message box will pop-out when you click the Send Data button in Marker genotype filename group. 6. Click Next button to accept the values. The Create New Source File – Step 6 of 6 appears. © 2010 N.C. State University, Bioinformatics Research Center
© 2010 N.C. State University, Bioinformatics Research Center WinQTLCart Procedures 51 This is the data summary dialog. The up window is map information and lower window is cross information. Click Back button to do the modification if the information is not right. After you check all the necessary data, click Finish button WinQTLCart will: Verify the data and display error messages if the data file is incomplete or formatted incorrectly. Create the .MCD file using the filename stem you entered at the first Create New Source File dialog. Show a create .MCD file successful dialog, click OK button to the dialog and display the Main window, with the MCD file you just created loaded into the Source Data form. Where to go from here Select an analysis method Creating simulation data 2 To use WinQTLCart's results graphing abilities, you need data for it to work on. If you haven't collected any data, though, you can still simulate a dataset that WinQTLCart can work with. To create a data simulation file, select File>Simulation. This displays the Create Simulation Data series of dialogs.
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Windows QTL Cartographer 2.5 User M
Page 3 and 4: Contents WinQTLCart Procedures 25 S
Page 5 and 6: About Windows QTL Cartographer WinQ
Page 7 and 8: These are all text files that you c
Page 9 and 10: © 2010 N.C. State University, Bioi
Page 11 and 12: Main window - Menus - Help Icon Com
Page 13 and 14: Main window tour © 2010 N.C. State
Page 15 and 16: Tree Item Action Function © 2010 N
Page 17 and 18: Graph window - Menus - File Command
Page 19 and 20: Graph window - Menus - Tools Comman
Page 21 and 22: Row Number> Increase graph number i
Page 23 and 24: Related topics Graph Window - Menus
Page 25 and 26: Selecting chromosomes for graph dis
Page 29 and 30: Related topics Creating simulation
Page 33 and 34: Note: © 2010 N.C. State University
Page 35 and 36: C. MCD file (only selected traits a
Page 37 and 38: Changing a cell's contents © 2010
Page 41 and 42: Working with source file's chromoso
Page 43 and 44: Working with source file's other tr
Page 49 and 50: Fill in the dialog based on your so
Page 53: First to specify raw data file's nu
Page 65 and 66: 3. Click Result File… to select t
Page 67 and 68: 6. Select one or all chromosomes to
Page 69 and 70: Epistasis. Number of epistatic gene
Page 77 and 78: file with Windows notepad. © 2010
Page 85 and 86: Tutorials A chromosome graphic befo
Page 87 and 88: Create new source data file © 2010
Page 91 and 92: Credits & acknowledgements © 2010
Page 93: QTL Cartographer 1, 4 export format
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Windows QTL Cartographer 2.5 - FTP Directory Listing

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