Windows QTL Cartographer 2.5 - FTP Directory Listing

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Windows QTL Cartographer 2.5
Import data - MapMaker format
1. Start WinQTLCart and select menu item File>Import or click .
2. Select Mapmaker/QTL format and click Next button.
3. Click button Map File to select file "mapmaker-samp.map".
4. Click button Cross Data to select file "mapmaker-samp".
5. Enter file name "mapmaker-samp_In" in edit box and click button Finish.
Import data - Excel format
1. Start WinQTLCart and select menu item File>Import or click .
2. Select Microsoft Excel format and click Next button.
3. Click button Excel File to select file "wqcart-samp.xls".
4. Enter file name "wqcart-samp_xls_In" in edit box and click button Finish.
Import data - CSV format
1. Start WinQTLCart and select menu item File>Import or click .
2. Select Microsoft CSV format and click Next button.
3. Click button CSV File to select file "NSimuB1-01-OnePop.csv".
4. Enter file name "NSimuB1-01-OnePop_in" in edit box and click button Finish.
Simulation source data file
1. Start WinQTLCart and select menu item File>Simulation or click .
2. In step 1/3, set parameters as:
Sample size: 200
Trait mean: 15.85
Random seed: any
Map function: Haldane
Cross type: B1
Translation table: AA>2, Aa>1, A>*
Total chromosome number: 3
3. Set The current chromosome as 1, Markers for chromosome 1 as 15, Average space
between marker as 9, Variations of the marker position as 10%. Click button Set as
default for all chromosomes to set parameter for other chromosome. Click button Next to step
2/3 dialog window.
4. In step 2/3, set parameters as:
QTL numbers: 7
Heritability: 0.82
Additive effect: Effects direction>Same
Effects distribution>Normal
Epistatic effect: None by uncheck the check box
Filename: "Nsimu-01"
Click button OK to step 3/3 dialog window.
5. In step 3/3, Click button Adjustment to adjust all parameters. Click button Save to save the
parameter setting to file "Nsimu-01.qpe". Click button OK to finish.
© 2010 N.C. State University, Bioinformatics Research Center