Windows QTL Cartographer 2.5 - FTP Directory Listing
Windows QTL Cartographer 2.5 - FTP Directory Listing
Windows QTL Cartographer 2.5 - FTP Directory Listing
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© 2010 N.C. State University, Bioinformatics Research Center<br />
Win<strong>QTL</strong>Cart Procedures 69<br />
9. Click the Criterion button. The Set Threshold dialog appears. Enter a threshold value or click<br />
Default to accept the default value (recommended). Click OK to accept the value and close the<br />
dialog and return to the Create New MIM dialog.<br />
10. Click the Start button to begin the search. The CIM form may display during the calculations.<br />
When the search is complete, the model is presented in the cells.<br />
11. To manually edit the model:<br />
Click Add <strong>QTL</strong> or Del <strong>QTL</strong><br />
Click on a cell and enter a new value in the Cell editing box. Click the Cell Update button<br />
to enter the new value.<br />
12. Click OK to accept the parameters, close the dialog and return to the MIM form.<br />
If you selected Set control markers manually in step 2, then Win<strong>QTL</strong>Cart will display the Select CIM<br />
Control Markers dialog box. Enter or edit the marker numbers you want to using the text box; separate<br />
each number with a space. Click on the marker row's cells to toggle their display in the text box.<br />
Where to go from here<br />
From here, you can refine the MIM model 70 , manually edit the model by clicking the Add <strong>QTL</strong> and Del<br />
<strong>QTL</strong> buttons, or click in the model field to change the value of Position, Chromosome, Additive, or<br />
epistatic values. Click Save Model… to save the model as a .MDS file.<br />
Related topics<br />
About the MIM form 63<br />
Refining the MIM model<br />
MIM search option<br />
70<br />
1. At the Select Parameters dialog, select a model selection criteria from the drop down list:<br />
BIC-M0 ---> c(n) = ln(n)