198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
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Supramolecular Synthons and Pattern Recognition 91<br />
certa<strong>in</strong> functional group category, no dom<strong>in</strong>ant motif is adopted by the molecules.<br />
Such appears to be the case for acetylenic alcohols conta<strong>in</strong><strong>in</strong>g the fragment<br />
63 [93]. Retrieval of data for sub-structure 63 from the CSD produced a list<br />
of 76 compounds. The hydrogen bond<strong>in</strong>g networks of these molecules did not<br />
produce a s<strong>in</strong>gle recurr<strong>in</strong>g pattern that can be associated with this sub-structure<br />
[94]. Rather, four different motifs could be i<strong>de</strong>ntified (Scheme 13), with none<br />
be<strong>in</strong>g predom<strong>in</strong>ant. This is <strong>in</strong> contrast to the behaviour of simple monoalcohols<br />
that crystallise ma<strong>in</strong>ly <strong>in</strong> two type of O-H◊◊◊O aggregates – cha<strong>in</strong>s and r<strong>in</strong>gs<br />
[95]. There is significant structural <strong>in</strong>terference <strong>in</strong> these acetylenic alcohols.<br />
Instead of the CC-H and OH groups associat<strong>in</strong>g <strong>in</strong> their isolated networks,<br />
complex patterns are formed where<strong>in</strong> CC-H◊◊◊OH 65 and OH◊◊◊CC-H 66<br />
hydrogen bonds are found <strong>in</strong> addition to the expected CC-H◊◊◊CC-H 67 and<br />
O-H◊◊◊O-H 64 hydrogen bonds. This may be due to the fact that the four different<br />
hydrogen bond<strong>in</strong>g patterns between the two functional groups, O-H◊◊◊O 64,<br />
C-H◊◊◊O 65, O-H◊◊◊p 66, and C-H◊◊◊p 67 have comparable energies, steric requirements<br />
and topologies.<br />
At a certa<strong>in</strong> level, the absence of patterns <strong>in</strong> groups of crystal structures is a<br />
manifestation of the fact that the molecular and crystal structures need not be<br />
related <strong>in</strong> obvious ways. After all, the gem<strong>in</strong>al position<strong>in</strong>g of hydroxy and<br />
ethynyl groups <strong>in</strong> 63 is only a molecular structural feature. There is no need that<br />
63<br />
64 65 66<br />
Scheme 13. Four common supramolecular synthons 64–67<strong>in</strong> 76 occurrences of the acetylenic<br />
alcohol fragment 63<br />
67<br />
68 69