198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
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174 M.R. Caira<br />
the laboratory (especially for metastable polymorphs) has h<strong>in</strong><strong>de</strong>red progress <strong>in</strong><br />
research on polymorphism. If, however, a polymorph is available <strong>in</strong> a pow<strong>de</strong>red<br />
crystall<strong>in</strong>e form and a computational method exists for predict<strong>in</strong>g possible<br />
three-dimensional crystal structures, then the latter can be used to generate<br />
computed X-ray pow<strong>de</strong>r patterns for comparison with the experimental pattern.<br />
While the scope of the present review does not permit <strong>de</strong>tailed exposition of the<br />
approaches and algorithms employed <strong>in</strong> crystal structure prediction, a summary<br />
of some recent <strong>de</strong>velopments, especially as they relate to polymorphism, is<br />
<strong>in</strong> or<strong>de</strong>r. The studies of polymorphism and crystal structure prediction are<br />
<strong>in</strong><strong>de</strong>ed two facets of the same topic [65]. Additional powerful motivations for<br />
predict<strong>in</strong>g crystal structures <strong>in</strong>clu<strong>de</strong> a better un<strong>de</strong>rstand<strong>in</strong>g of the crystallization<br />
process as well as the <strong>de</strong>sign of new solid materials. The rea<strong>de</strong>r is referred<br />
to several recent treatments of crystal structure prediction [66–70]. Comments<br />
on some of these methods and their applications follow.<br />
In the atom-atom potential (AAP) method as implemented <strong>in</strong> the program<br />
PROMET [66], symmetry operations (e.g. a screw axis, centre of <strong>in</strong>version)<br />
appropriate to the chosen space group, are applied to a molecule <strong>in</strong> fixed conformation<br />
(possibly optimised previously by a molecular mechanics calculation)<br />
to generate molecular clusters. Follow<strong>in</strong>g a search for the most stable<br />
clusters on the potential hypersurface (calculated us<strong>in</strong>g empirical atom-atom<br />
potentials), translation is applied to generate one or more periodic structures.<br />
Pack<strong>in</strong>g energies are computed and acceptable structures are optimised. This is<br />
a very useful means of generat<strong>in</strong>g a series of polymorphic structures for a given<br />
molecule. In this approach, consi<strong>de</strong>ration is usually given to only the most<br />
populous space groups (93% of organic molecules be<strong>in</strong>g conf<strong>in</strong>ed to 18 space<br />
groups [71]) thereby runn<strong>in</strong>g a small risk of an <strong>in</strong>correct choice. If an experimental<br />
X-ray pow<strong>de</strong>r pattern of the material is available, the correct crystal<br />
structure may be i<strong>de</strong>ntified by comparison with computed pow<strong>de</strong>r patterns<br />
from the candidate structures generated by PROMET. In a study us<strong>in</strong>g this procedure<br />
[72] several literature cases were selected, for each of which the crystal<br />
structure of one polymorph had been <strong>de</strong>term<strong>in</strong>ed, and mention was ma<strong>de</strong> of the<br />
existence of a second polymorph whose crystals were unsuitable for complete<br />
structural elucidation by X-ray analysis. Only unit cell and space group data<br />
were available for these un<strong>de</strong>term<strong>in</strong>ed polymorphs. Each start<strong>in</strong>g molecular<br />
conformation was assumed to be the same as that <strong>in</strong> the correspond<strong>in</strong>g fully<br />
characterised polymorph and was submitted to the PROMET procedure. In all<br />
cases, satisfactory structures were generated, with predicted unit cell data <strong>in</strong><br />
good agreement with the experimental ones and with pack<strong>in</strong>g energies <strong>in</strong> the<br />
expected ranges. These results represent authentic crystal structure prediction,<br />
assisted by partial X-ray data. The method is therefore an alternative to direct<br />
methods of structural solution and also implies that, provi<strong>de</strong>d cell and space<br />
group <strong>in</strong>formation can be acquired, full structure <strong>de</strong>term<strong>in</strong>ation without diffraction<br />
data is feasible. The authors of this study are less optimistic as regards<br />
true ab <strong>in</strong>itio crystal structure prediction for numerous reasons, among them<br />
that pack<strong>in</strong>g energies for polymorphs of the same compound are always very<br />
similar, ren<strong>de</strong>r<strong>in</strong>g the choice of the correctly computed structure difficult <strong>in</strong> the<br />
absence of other data, and that the occurrence of polymorphs conta<strong>in</strong><strong>in</strong>g mole-