198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...
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8 J.P. Glusker<br />
other <strong>in</strong>duced, will <strong>in</strong>teract <strong>in</strong> the same way as two dipoles. The strength of this<br />
<strong>in</strong>teraction <strong>de</strong>pends on the magnitu<strong>de</strong> of the permanent dipole moment of the<br />
polar molecule, and on the polarizability of the second molecule. Even if the two<br />
molecules are nonpolar, there can be attractive, low-energy molecular <strong>in</strong>teractions<br />
between them. These are <strong>in</strong>duced dipole-<strong>in</strong>duced dipole <strong>in</strong>teractions, also<br />
called London dispersion forces, <strong>in</strong> which a nonpolar molecule <strong>in</strong>duces a small<br />
<strong>in</strong>stantaneous dipole <strong>in</strong> another nearby polar molecule. The force F (<strong>in</strong> dynes)<br />
between two charges q and q¢ (<strong>in</strong> electrostatic units) is expressed by Coulomb’s<br />
equation:<br />
F = /q q¢)/(er 2 )<br />
where r is the distance (<strong>in</strong> cm) between the charges and e is the dielectric constant<br />
of a medium (such as solvent). The higher the dielectric constant of the<br />
medium, the more the force between the two groups <strong>in</strong>teract<strong>in</strong>g with each other<br />
is reduced. For example, hydrogen chlori<strong>de</strong> exists as H + and Cl – <strong>in</strong> water, which<br />
has a high dielectric constant of 80, while <strong>in</strong> vacuo, where the dielectric constant<br />
is unity, the two components comb<strong>in</strong>e directly to give HCl. Thus water is an<br />
excellent solvent because Coulombic <strong>in</strong>teractions <strong>in</strong> it are sufficiently weak to<br />
allow ions to rema<strong>in</strong> separated.<br />
4<br />
Directed Organic Interactions<br />
Analyses of pack<strong>in</strong>g <strong>in</strong> crystals have, <strong>in</strong> many cases, shown that there are directional<br />
preferences of b<strong>in</strong>d<strong>in</strong>g. The nature of this directionality appears to<br />
<strong>de</strong>pend on the partial charges <strong>de</strong>veloped on the <strong>in</strong>teract<strong>in</strong>g atoms. Some examples<br />
will now be <strong>de</strong>scribed.<br />
4.1<br />
Intermolecular Interactions <strong>in</strong> Hydrocarbons<br />
The nature of <strong>in</strong>termolecular <strong>in</strong>teractions is exemplified by the crystal structures<br />
of polycyclic aromatic hydrocarbons (PAHs) which conta<strong>in</strong> only carbon<br />
and hydrogen atoms. Analyses of crystal structures have led to the <strong>de</strong>rivation of<br />
numerical constants <strong>de</strong>scrib<strong>in</strong>g the forces between pairs of atoms [11, 12]. Thus<br />
the potential energy expression <strong>in</strong>volves an equation of the form<br />
V = ∑ j, k[–A jkr jk –6 +Bjk exp (–C jkr jk) + q jq kr jk –1 ] . (1)<br />
In this equation r jk is a nonbon<strong>de</strong>d <strong>in</strong>teratomic distance between atoms j and k,<br />
q is the po<strong>in</strong>t electrostatic charge on an atom, and A jk B jk and C jk are adjustable<br />
parameters that have been obta<strong>in</strong>ed from experimental measurements of unit<br />
cell dimensions, <strong>in</strong>teratomic distances, and pack<strong>in</strong>g arrangements <strong>in</strong> crystal<br />
structures. A jk represents the coefficient of the London dispersion attraction<br />
term between atoms j and k, while B jk and C jk are short-range repulsive energy<br />
terms. The summation is over all <strong>in</strong>teratomic <strong>in</strong>teractions (between all j atoms<br />
and all k atoms). For PAHs the terms <strong>in</strong> Eq. (1) represent forces between pairs of