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198 Topics in Current Chemistry Editorial Board: A. de Meijere KN ...

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42 J.P. Glusker<br />

Fig. 34. Glyc<strong>in</strong>e crystals b<strong>in</strong>d<strong>in</strong>g optically active am<strong>in</strong>o acids [86, 116]. Shown is the b<strong>in</strong>d<strong>in</strong>g of<br />

D-alan<strong>in</strong>e to the 010 face and L-alan<strong>in</strong>e to the 01 – 0 face. The methyl groups of alan<strong>in</strong>e are<br />

stippled circles for the former, and filled circles for the latter<br />

9<br />

Applications to Macromolecular Structures<br />

Macromolecular recognition often <strong>in</strong>volves many po<strong>in</strong>ts of <strong>in</strong>teraction, whether<br />

it is subunit assembly, substrate or <strong>in</strong>hibitor b<strong>in</strong>d<strong>in</strong>g or the operation of control<br />

factors. The b<strong>in</strong>d<strong>in</strong>g of drugs to biological macromolecules <strong>in</strong>volves a fit between<br />

the drug and its receptor that <strong>de</strong>pends not only on their respective shapes,<br />

but also on the distribution of electronic charge on the surfaces of both molecules<br />

so that a complementary fit may be obta<strong>in</strong>ed. Molecules with similar, but<br />

not i<strong>de</strong>ntical, formulae may b<strong>in</strong>d to the same receptor <strong>in</strong> the same or different<br />

ways, <strong>de</strong>pend<strong>in</strong>g on the nature of the functional groups <strong>in</strong> each.<br />

9.1<br />

B<strong>in</strong>d<strong>in</strong>g of Drugs to Dihydrofolate Reductase<br />

An extensively studied enzyme-<strong>in</strong>hibitor system <strong>in</strong>volves the prote<strong>in</strong> dihydrofolate<br />

reductase [88]. Crystallographic results <strong>de</strong>monstrate an important feature<br />

of drug-enzyme <strong>in</strong>teractions; an <strong>in</strong>hibitor drug may not b<strong>in</strong>d <strong>in</strong> the same way as<br />

substrate even though both have similar chemical formulae. This enzyme catalyzes<br />

the reduction of 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate, an essential

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