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Training of Trainers - Library - Network of Aquaculture Centres in ...

Training of Trainers - Library - Network of Aquaculture Centres in ...

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In pr<strong>in</strong>ciple, the only factors that need to be considered <strong>in</strong> choos<strong>in</strong>g the correct design <strong>of</strong> an immunoassay are thetypes <strong>of</strong> antibodies that are available (polyclonal antibodies, monoclonal antibodies, a s<strong>in</strong>gle or two or moremonoclonal antibodies) and whether pure or impure antigen is available.Polymerase cha<strong>in</strong> reactionPCR is a technique for the <strong>in</strong> vitro amplification <strong>of</strong> specific DNA sequences by the simultaneous primer extension<strong>of</strong> complementary strands <strong>of</strong> DNA. The reaction composes with three steps <strong>in</strong>clud<strong>in</strong>g: denaturation, anneal<strong>in</strong>gand extension. The f<strong>in</strong>al products or PCR products are subsequently analysed by agarose gel electrophoresis orwith some more advance techniques for further required <strong>in</strong>formation.In situ hybridizationIn situ hybridization is a technique for identify<strong>in</strong>g specific nucleic acid sequences (genes) <strong>in</strong> their cellularenvironment. The probe is oligonucleotide specific to the target DNA <strong>of</strong> the pathogen/organs. The probes arenormally l<strong>in</strong>ked with the signal system, which can be enzymatic system or isotopic system. In f<strong>in</strong>al step the l<strong>in</strong>kedsignal is visualized with relevant enzyme/substrate to determ<strong>in</strong>e the reaction.Disease prevention strategiesGood farm managementGood farm management is a major part <strong>of</strong> the disease prevention strategies. S<strong>in</strong>ce the <strong>in</strong>fectious agents are allaround <strong>in</strong> the environment and surround<strong>in</strong>g wild aquatic animals, farmers should take a number <strong>of</strong> measures tom<strong>in</strong>imize the disease <strong>in</strong> their stocks. These measures are <strong>in</strong>clud<strong>in</strong>g:• screen seed/broodstock for any <strong>in</strong>fectious agents before <strong>in</strong>troduc<strong>in</strong>g <strong>in</strong>to the farms• control water source and quality to ensure optimum grow<strong>in</strong>g <strong>of</strong> their animals and reduce exposure topathogens• ma<strong>in</strong>ta<strong>in</strong> stock<strong>in</strong>g densities at optimum level• allow time to fallow sites between crops and apply dis<strong>in</strong>fectant to pond/tank and equipment• apply strict hygiene practices <strong>in</strong>clud<strong>in</strong>g dis<strong>in</strong>fection procedures• avoid equipment movement between different areas <strong>of</strong> the farms• improve nutrition and diet, and store them <strong>in</strong> cool, dry, and well-ventilated place to prevent rancid andmould<strong>in</strong>g• closely monitor the stocks to ensure early detection <strong>of</strong> disease problemsHealth surveillanceRegular monitor<strong>in</strong>g <strong>of</strong> fish health is highly recommended to be part <strong>of</strong> good aquaculture practice. This will assurethe farmer to be aware <strong>of</strong> the fish health status and any early <strong>in</strong>fection that may occur with<strong>in</strong> their farm. Thesampl<strong>in</strong>g size must be well represent the whole population and m<strong>in</strong>imize the overlook<strong>in</strong>g <strong>of</strong> the early <strong>in</strong>fection.Number <strong>of</strong> fish samples for the health surveillance purpose is described <strong>in</strong> Table 1.However, the process <strong>of</strong> captur<strong>in</strong>g fish can <strong>in</strong>troduce some certa<strong>in</strong> degree <strong>of</strong> stress to both sampled fish and theentire population. Nett<strong>in</strong>g and handl<strong>in</strong>g should greatly be taken care and time out <strong>of</strong> water should be m<strong>in</strong>imized.Anesthetics are also commonly practiced to improve fish survivability and growth post handl<strong>in</strong>g.Vacc<strong>in</strong>ationVarious types <strong>of</strong> vacc<strong>in</strong>e are commercially available ma<strong>in</strong>ly to the major diseases <strong>of</strong> economic fish species.Monovalent vacc<strong>in</strong>e is a product to cover only one pathogen stra<strong>in</strong>, whereas the multivalent is aimed to cover a52

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