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Administrator Depth Fading3D enhancement: The depth fading feature in Chem3D creates a realistic depth effect, by making parts of the model further from the viewer fade into the background. Depth shading is activated by selecting the Depth Fading checkbox on the Stereo and Depth tab of the Model Settings dialog box, by selecting Depth Fading from the Model Display submenu of the View menu, or by clicking the Depth fading icon on the Toolbar. Perspective Rendering Chem3D supports true perspective rendering of models. This results in a more realistic depiction of the model, with bond lengths and atom sizes further from the viewer being scaled consistently. The “field of view” slider adjusts the perspective effect. Moving the slider to the right increases the effect. Coloring the Background Window Chem3D allows you to select a color for the background of your models. A black or dark blue background can be particularly striking for ribbon displays intended for full color viewing, whereas a light background is more suitable for print copy. To change the default background color of the model window: 1. In the Colors and Fonts tab of the Model Settings control panel, click Background Color. Background color Depth Fading, Perspective, & field of view slider The Color dialog box appears. 2. Select a color and click OK. NOTE: The background colors are not saved in PostScript files or used when printing, except when you use the Ribbons display. CAUTION Moving the slider all the way to the left may make the model disappear completely. Coloring Individual Atoms You can mark atoms individually using the Select Color command in the Model Explorer. 88 •Displaying Models <strong>CambridgeSoft</strong> Structure Displays
To change an atom to a new solid color: 1. In the Model Explorer, select the atom(s) to change. 2. From the Right-click menu, choose Select Color. The Color dialog box appears. 3. Select a color and Click OK. The color of the atom(s) changes to the new color. To remove a custom atom color from the model display: 1. In the Model Explorer, select the atoms whose colors you want to change. 2. Right-click, point to Apply Atom Color and choose Inherit Atom Color. The custom colors are removed from the selected atoms. Displaying Atom Labels You can control the appearance of element symbols and serial numbers using the Atom Labels tab in the Model Settings control panel, and the corresponding commands in the Model Display submenu of the View menu. Setting Default Atom Label Display Options To set the Element Symbols and Serial Numbers defaults: 1. On the Colors and Fonts tab of the Model Settings dialog box, select the font, point size and color. 2. Click the Set as Default button. All atoms currently in the model window display the selected options. To toggle the Atom Labels or Serial Numbers at any time, do one of the following: • From the Model Display submenu of the View menu, choose Show Atom Labels or Show Serial Numbers. • Click the Atom Label or Serial Numbers icon on the Model Display Toolbar. Displaying Labels Atom by Atom To display element symbols or serial numbers in individual atoms: 1. In the Model Explorer, select the atom to change. 2. On the Right-click menu, point to Atom Serial Number or Atom Symbol and choose Show... Using Stereo Pairs Stereo Pairs is a display enhancement technique based on the optical principles of the Stereoscope, the late-Nineteenth century device for 3D viewing of photographs. By displaying two images with a slight displacement, a 3D effect is created. Stereo views can be either Parallel or Reverse (direct or cross-eyed). Some people find it easier to look directly, others can cross their eyes and focus on two images, creating an enhanced three dimensional effect. In either case, the effect may be easier to achieve on a printed stereo view of your model than on the screen. Keep the images relatively small, and adjust the distance from your eyes. To set the Stereo Pairs parameters: 1. Open the Model Setting dialog box, and click the Stereo and Depth tab. The stereo views control panel appears. <strong>ChemOffice</strong> 2005/Chem3D Displaying Models • 89 Structure Displays
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ChemOffice.Com ® ChemOffice ® Che
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License Information ChemOffice, Che
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· Licensed users of ChemOffice Ent
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computer, except as provided below.
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Q: IS IT OK TO COPY MY COLLEAGUE’
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A Guide to CambridgeSoft Manuals An
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Chapter 31: Changes and Audit Trail
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Administrator Tutorial 7: Docking M
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Administrator Connection Table . .
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Administrator Specifying Properties
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Administrator Undoing Changes . . .
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Administrator Chapter 28: Introduci
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Administrator Atom Properties . . .
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Administrator Deleting a Field Type
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Administrator Example 2. . . . . .
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Administrator Reaction Center . . .
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Administrator In addition to browsi
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Administrator Microsoft®Windows®
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Administrator Truncated-Newton-Raph
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Administrator the activation each t
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Administrator The following table d
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Administrator • Stereo Pairs—A
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Administrator • Bond Angles—Dis
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Administrator The Building Toolbar
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Administrator The Calculation Toolb
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Administrator 1. Right-click in the
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Administrator • In the Model Sett
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Administrator modes and color setti
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Administrator 26 •Chem3D Basics C
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Administrator 2. Click the ChemDraw
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3. Move the pointer over the C-C bo
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Administrator Add serial numbers an
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Administrator 5. Press the Enter ke
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. Administrator b. From the Structu
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Administrator 6. The modified value
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Administrator A variety of other ba
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Administrator Molecular wave functi
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Administrator activation barriers.
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3. From the Calculations menu, poin
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Administrator Intermediate status m
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Administrator staggered form. The m
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Administrator During dragging, the
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If you want to … Then Click … A
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Compute Properties The Compute Prop
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Administrator C(2)-C(3)-C(4) bond a
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Administrator The procedures assume
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Administrator improvements in each
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Administrator • Overall errors in
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Administrator TRIPLET QUARTET QUINT
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Administrator Minimizing Energy Min
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Administrator criteria, to optimize
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Administrator Dipole Moment The dip
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Administrator Molecular Surfaces Mo
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Keyword Description 7. On the Prope
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Administrator • From the ChemOffi
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Administrator Screen Element Table
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to see some of the information avai
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Administrator To search over a list
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Administrator 250•ChemFinder Tuto
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The Open dialog box appears. To cho
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A data source tree appears, contain
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ChemFinder saves the form with a .c
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Administrator To save a metafile fr
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Administrator • Rich Text—displ
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Administrator Adding a Data Box Men
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Administrator Customizing Numbers U
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Administrator to those usernames. M
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Administrator 282•Relational Data
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Administrator The following table s
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Administrator Creating Tables There
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Administrator ChemFinder creates a
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Administrator • If you are editin
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Administrator The record is permane
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Administrator Context menu options
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The general procedure for importing
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Administrator Using Log Files Durin
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Administrator Export to SDFile When
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Administrator benz OR *bromo* Benze
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Administrator The hit list will inc
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Administrator Using ChemDraw's Atom
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To set the options for what ChemFin
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Administrator Creating a Script To
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Administrator rather difficult, but
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Administrator • Restore Previous
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Administrator 6. Set other options
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Administrator 360•ChemFinder/Orac
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Administrator Reactant List Format
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Administrator • You can configure
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Administrator ChemFinder/Office tit
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Administrator For more information
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Administrator The Open Chemical Str
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Administrator 3. From the Molecules
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Administrator To use the Search Opt
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Administrator • Enhanced table of
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Administrator In addition, this gui
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Administrator 388• Introducing E-
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Administrator You can organize coll
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Creating a Page or Experiment Admin
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Administrator Working with the User
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Administrator Your system configura
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Administrator Working with Template
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Administrator Desired Result Change
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Administrator To export to MS Word:
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Administrator 410• E-Notebook Use
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Administrator NO 2 NO 2 Me Me HC(OE
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Administrator • Top of Arrow as R
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Administrator • Equivalents - the
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The example below shows the Prepara
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Administrator Ethanol was selected,
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Administrator Type in the AutoText
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Type of Measurement Permitted Units
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3. Enter the URL and click OK. Work
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Administrator A new Ancillary Data
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Administrator Replacing a Spectrum
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Administrator you enter an invalid
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Administrator Type of Measurement m
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Administrator 4. The spreadsheet ap
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5. Click the section menu icon. The
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Administrator Printing Sections You
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Administrator Clicking the Changes
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. Administrator The version of the
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Administrator In some configuration
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Administrator 452• Changes and Au
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Administrator 2. If no form appears
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Administrator 2. Select Remove Prop
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Administrator Advanced Text Searchi
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Administrator Searching For ... Ret
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3. Click the Search In... checkbox
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Administrator The Collection Tree a
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2. Select Session Manager.... The S
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Administrator A new section type ap
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Administrator See the following top
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Administrator 506• Managing Secti
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Administrator Several fields types
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Administrator • Default Font - yo
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The Section Type Configuration dial
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Administrator Example 1 In this exa
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Administrator See the following top
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Administrator Associating a list of
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Administrator • Username - An opt
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Administrator from the Property dro
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Administrator The Field Properties
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Administrator Another feature of ta
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Administrator 3. Right-click the Ta
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Administrator • SupplierID - the
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Administrator reactants and product
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Managing Search Fields Administrato
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Administrator • Certain types of
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4. Enter a name for the field and s
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Administrator To access the Add-In
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Administrator In the query table fi
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Creating a New Collection Type The
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Administrator 5. Click the Add>> bu
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Administrator A menu appears with t
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Administrator Creating a Search Typ
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Administrator Chemical Structure Se
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Administrator To add states to a co
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• Removing a Transition Listener
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Administrator • Unlocked Contents
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Administrator If the user wants to
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A new Transition Listener appears,
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Administrator To view the export te
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Administrator To edit this data, 1.
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Administrator Setting the Region fo
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Administrator 584• User Administr
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Administrator 2. If Inherits Securi
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To change the Transition Security P
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Administrator Desired Result Remove
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Administrator 596• Managing E-Not
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Administrator Section Listeners E-N
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Administrator • Add Reactant tabl
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Administrator 604 • CambridgeSoft
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Administrator Accessing the Online
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Administrator To find a structure t
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Administrator The CS ChemOffice SDK
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Administrator Troubleshooting This
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Administrator Defining Substructure
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Administrator If an atom can be ass
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Administrator Example 3 In Example
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Administrator 14 13 H 2.197 -0.8229
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Administrator COMPND ATOM HETATM CO
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Parameter Table Use Parameter Table
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O O Bond Type Description Administr
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Administrator 706• CS Oracle Cart
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Administrator Combi experiments 367
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Administrator Mol_ID field 287 Mola
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Administrator Property query and ta
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Administrator Redo command 269, 299
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Administrator Sextic bending consta
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Administrator Subforms (continued)
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Administrator User interface 9 User
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Administrator xxxviii• CambridgeS
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CAMBRIDGESOFT ChemOffice Desktop to
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CS ChemOffice Software Suites ChemO
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DESKTOP CS E-Notebook Electronic Jo
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DESKTOP CS ChemDraw Chemical Struct
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DESKTOP CS Chem3D Molecular Modelin
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DESKTOP CS ChemFinder Searching and
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DESKTOP CS ChemInfo Reference and C
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ENTERPRISE ChemOffice WebServer Ent
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ENTERPRISE Oracle Cartridge Enterpr
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KNOWLEDGE E-Notebook Enterprise Des
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KNOWLEDGE Document Manager Desktop
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KNOWLEDGE 21CFR11 Compliance Electr
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RESEARCH & Registration System Chem
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RESEARCH & Inventory Manager Chemic
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RESEARCH & CombiChem Enterprise Des
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RESEARCH & BioAssay HTS Biological
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RESEARCH & BioSAR Browser Biologica
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CHEMICAL ChemACX Database Available
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CHEMICAL The Merck Index Chemistry
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CHEMICAL Chemical Databases Referen
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CONSULTING & Consulting & Services
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CS Software Problem Report For fast
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