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Administrator 2. Click the ChemDraw tab to open the panel. TIP: The panel default is Auto-hide. If you want the panel to stay open, push the pin on the upper right. pin 3. Click in the ChemDraw panel it. A blue line appears around the ChemDraw Panel model window, and the ChemDraw tools palette appears. 4. On the ChemDraw tools palette, select the Benzene Ring tool. 5. Click in the panel to place a benzene ring. The ChemDraw structure is converted into a 3D representation. You can turn off the hot linking by clicking the Synchronize button. If you do this, you will need to use the 3D>Draw and Draw>3D buttons to copy models between the windows. Synchronize Draw>3D add 3D>draw Draw>3D replace Cleanup Clear Lock Name=Struct text box TIP: Use Ctrl+A to select the model you want to copy. Tutorial 2: Building Models with the Bond Tools Draw ethane using a bond tool. 1. Click the Single Bond tool . 2. Point in the model window, drag to the right and release the mouse button. A model of ethane appears. When you rotate the model in a later step, you will see the other hydrogen. You can work with the model in Chem3D. The 2D and 3D models are hot-linked, so any change in one changes the other: 1. Double-click one of the hydrogens in the 3D model. A text box appears. 2. Type OH in the text box, then hit the Enter key. 3. A phenol molecule is displayed in both the Chem3D model window and the ChemDraw window. NOTE: If you are using default settings, hydrogens are displayed automatically. To see the three-dimensionality of your model you can perform rotations using the Trackball tool. The Trackball Tool mimics a sphere in which your 28 •Chem3D Tutorials <strong>CambridgeSoft</strong> Tutorial 2: Building Models with the Bond Tools
model is centered. You can rotate your model by rotating the sphere. You have a choice of free-hand rotation, or rotating around the X, Y, or Z axis. 3. Release the mouse button when the model is orientated approximately like this: To perform free-hand rotation of the model with the Trackball tool: 1. Click the Trackball tool . 2. Point near the center of the model window and hold down the mouse button. 3. Drag the cursor in any direction to rotate the model. CAUTION Users familiar with earlier versions of Chem3D should be aware of changed behavior: the Trackball tool rotates the view only, it does not change the atoms’ Cartesian coordinates. To rotate around an axis: 1. Move the cursor to the edge of the model window. As you mouse over the edge of the window, the rotation bars will appear. Examine the atoms and bonds in the model using the Select tool. 1. Click the Select tool . 2. Move the pointer over the far left carbon. NOTE: Depending on how much you rotated the model, the far left carbon might be C(2). An information box appears next to the atom you are pointing at. The first line contains the atom label. In this case, you are pointing to C(1). The second line contains the name of the atom type, C Alkane. NOTE: Rotation bars are only available when you are using the Trackball tool. 2. Drag on one of the bars to rotate the model on that axis. One of the bars is labeled “Rotate About Bond”. You won’t be able to select that one. You’ll cover rotating around bonds later. TIP: Once you start dragging, you don’t have to stay within the rotation bar’s boundaries. Your model will only rotate around the chosen axis no matter where you drag your mouse. <strong>ChemOffice</strong> 2005/Chem3D Chem3D Tutorials • 29 Tutorial 2: Building Models with the Bond Tools
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ChemOffice.Com ® ChemOffice ® Che
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License Information ChemOffice, Che
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· Licensed users of ChemOffice Ent
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computer, except as provided below.
Page 10 and 11: Q: IS IT OK TO COPY MY COLLEAGUE’
Page 12 and 13: A Guide to CambridgeSoft Manuals An
Page 14 and 15: Chapter 31: Changes and Audit Trail
Page 16 and 17: Administrator Tutorial 7: Docking M
Page 18 and 19: Administrator Connection Table . .
Page 20 and 21: Administrator Specifying Properties
Page 22 and 23: Administrator Undoing Changes . . .
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Administrator 250•ChemFinder Tuto
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A data source tree appears, contain
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ChemFinder saves the form with a .c
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Administrator 388• Introducing E-
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Administrator Desired Result Change
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Administrator To export to MS Word:
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Administrator 410• E-Notebook Use
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Administrator NO 2 NO 2 Me Me HC(OE
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Administrator • Equivalents - the
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Administrator Type in the AutoText
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Administrator 452• Changes and Au
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Administrator Searching For ... Ret
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Administrator The Collection Tree a
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2. Select Session Manager.... The S
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Administrator Example 1 In this exa
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Administrator Associating a list of
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Administrator • Username - An opt
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Administrator To access the Add-In
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Administrator If the user wants to
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Administrator To view the export te
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Parameter Table Use Parameter Table
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Administrator xxxviii• CambridgeS
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CAMBRIDGESOFT ChemOffice Desktop to
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CS ChemOffice Software Suites ChemO
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DESKTOP CS E-Notebook Electronic Jo
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DESKTOP CS ChemDraw Chemical Struct
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DESKTOP CS Chem3D Molecular Modelin
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DESKTOP CS ChemFinder Searching and
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DESKTOP CS ChemInfo Reference and C
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ENTERPRISE ChemOffice WebServer Ent
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ENTERPRISE Oracle Cartridge Enterpr
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KNOWLEDGE E-Notebook Enterprise Des
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KNOWLEDGE Document Manager Desktop
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KNOWLEDGE 21CFR11 Compliance Electr
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RESEARCH & Registration System Chem
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RESEARCH & Inventory Manager Chemic
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RESEARCH & CombiChem Enterprise Des
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RESEARCH & BioAssay HTS Biological
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RESEARCH & BioSAR Browser Biologica
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CHEMICAL ChemACX Database Available
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CHEMICAL The Merck Index Chemistry
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CHEMICAL Chemical Databases Referen
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CONSULTING & Consulting & Services
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CS Software Problem Report For fast
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