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BioHPLC Column Selection Guide Cover - Agilent Technologies

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Capillary and Nano <strong>Column</strong>s<br />

Proteins in a complex sample by 2-D HPLC<br />

with Nano HPLC columns<br />

<strong>Column</strong>: ZORBAX 300SB-C18<br />

5065-9913<br />

0.3 x 5 mm, 5 µm<br />

<strong>Column</strong>: ZORBAX 300SB-C18<br />

5065-9911<br />

0.075 x 150 mm, 3.5 µm<br />

Mobile Phase: Quaternary Pump: 3% Acetonitrile/0.1% Formic acid<br />

Nanopump: A = Water, 0.1% Formic acid,<br />

B = ACN, 0.1% Formic acid<br />

Flow Rate: Quaternary Pump: 30 µL/min<br />

Nanopump: 300 nL/min<br />

Gradient: Quaternary Pump: Isocratic<br />

Nanopump:<br />

6 min = 3% B, 120 min = 60% B, 125 min = 80% B,<br />

130 min = 80% B, 131 min = 3% B, 140 min = 3% B<br />

Tryptic digest of bovine serum albumin (BSA).<br />

The base peak chromatograms show a<br />

selection of fractions from a 2-D HPLC<br />

separation. Single chromatograms represent<br />

peptides from BSA eluting at a given salt<br />

concentration followed by enrichment and<br />

reversed-phase chromatography.<br />

112 www.agilent.com/chem/biohplc<br />

Intens.<br />

x10<br />

1.0<br />

6<br />

0.5<br />

x10 5<br />

6<br />

4<br />

2<br />

x10<br />

6<br />

5<br />

4<br />

2<br />

x10<br />

1.0<br />

6<br />

0.5<br />

MS Conditions: Source: Nano ESI, drying gas flow: 5 L/min, drying gas temp: 225 °C<br />

Ion Trap: Skim: 1:35 V, cap exit offset: 115 V, octopole 1:12 V,<br />

octopole 2:3.5 V, trap drive: 80 V. ICC: on, averages: 4, max accu time:<br />

150 ms; target 60.000, ion mode positive, MS/MS mode.<br />

Sample: Tryptic Digest of bovine serum albumin<br />

Volume: 1 to 8 µL<br />

Salt Step Elution: 8 mL of 10 mM-100 mM KCI (10 mM increments),<br />

125 mM, 150 mM, 200 mM, 300 mM, 500 mM, 1 M.<br />

5 10 15 20<br />

Time (min)<br />

25 30 35 40<br />

30 mM KCI<br />

60 mM KCI<br />

75 mM KCI<br />

120 mM KCI<br />

LCCN004

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