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Biological Opinions - Bureau of Reclamation

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Potential<br />

Stressor<br />

Disease<br />

(C. shasta)<br />

Project<br />

Effects<br />

Increased<br />

likelihood <strong>of</strong><br />

impaired<br />

growth,<br />

swimming<br />

performance,<br />

body<br />

condition,<br />

and increased<br />

stress and<br />

susceptibility<br />

to secondary<br />

infections<br />

Increased<br />

likelihood <strong>of</strong><br />

diseaserelated<br />

mortality<br />

Life<br />

Stage<br />

Fry<br />

Parr<br />

Smolts<br />

Fry<br />

Parr,<br />

and<br />

Smolts<br />

General<br />

Time<br />

April to mid-<br />

June<br />

April to<br />

August<br />

April to June<br />

May to mid-<br />

June<br />

May to June<br />

Mainstem<br />

Location<br />

Klamathon<br />

Bridge (RM<br />

187.6) to<br />

Orleans (RM<br />

59)<br />

Trees <strong>of</strong><br />

Heaven (RM<br />

172) to Seiad<br />

Valley (RM<br />

129)<br />

Minimization Measure(s)<br />

Flow variability will increase mainstem flows<br />

when precipitation and snow melt is occurring<br />

in the Upper Klamath Basin, which will help to<br />

dilute actinospore concentrations and/or disturb<br />

polychaetes and their habitats. In addition,<br />

flow variability will provide dynamic fluvial<br />

environments in the mainstem Klamath River<br />

that may impair polychaete fitness,<br />

reproductive success, or infection with C.<br />

shasta. Compared to observed POR<br />

conditions, the Project will increase the<br />

magnitude and frequency <strong>of</strong> peak flows, which<br />

will likely decrease the abundance <strong>of</strong><br />

polychaetes in the spring and summer<br />

following a channel maintenance flow event.<br />

In addition, the increase in magnitude and<br />

frequency <strong>of</strong> channel maintenance flows under<br />

the proposed action will likely decrease the<br />

actinospore concentrations relative to the<br />

observed POR when the channel maintenance<br />

flow event occurs in the spring, particularly in<br />

May and June. The adaptive management<br />

element <strong>of</strong> the proposed action is likely to<br />

minimize disease risks to coho salmon during<br />

average to below average water years if EWA<br />

surplus volume is available. Lastly the<br />

proposed minimum daily flows in April to June<br />

will limit the increase in disease risks posed to<br />

coho salmon under the proposed action.<br />

Proposed Action Effects<br />

The proposed action will<br />

result in disease risks to coho<br />

salmon that are lower than<br />

observed POR conditions yet<br />

higher than under natural<br />

flow conditions.<br />

373

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