Coordinated regulation of gene expression by E ... - Jacobs University
Coordinated regulation of gene expression by E ... - Jacobs University
Coordinated regulation of gene expression by E ... - Jacobs University
You also want an ePaper? Increase the reach of your titles
YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.
APPENDIX I<br />
<strong>gene</strong> blattner ratio p-value Function<br />
A/B<br />
ycbQ b0938 0.2233 0.0046 putative fimbrial-like protein<br />
ycbS b0940 0.4473 0.0081 putative outer membrane protein<br />
ycbT b0941 0.5092 0.0133 homolog <strong>of</strong> Salmonella FimH protein<br />
yccU b0965 1.4442 0.0412 putative NAD(P)-binding enzyme<br />
ycdN b1016 1.2686 0.0288 hypothetical protein <strong>of</strong> the OFeT transport family<br />
ycdU b1029 0.3114 0.0236 putative enzyme<br />
yceI b1056 0.6004 0.0350 periplasmic protein; possibly secreted<br />
ycfR b1112 0.3049 0.0045 conserved hypothetical protein<br />
ycgH_1 b1169 0.2603 0.0228 conserved protein; member <strong>of</strong> the Autotransporter family<br />
ycgV b1202 0.1758 0.0031 putative adhesion and penetration protein<br />
yciE b1257 0.5250 0.0110 conserved protein<br />
ycjN b1310 0.4274 0.0070 YcjN/YcjO/YcjP ABC transporter<br />
ycjO b1311 1.4055 0.0364 YcjN/YcjO/YcjP ABC transporter<br />
ycjP b1312 0.5766 0.0237 YcjN/YcjO/YcjP ABC transporter<br />
ycjQ b1313 0.5545 0.0251 putative oxidoreductase<br />
ydbH b1381 1.4568 0.0176 conserved protein<br />
ydcA b1419 0.7482 0.0460 hypothetical protein<br />
yddJ b1470 0.7674 0.0421 hypothetical protein<br />
yddV b1490 0.4204 0.0091 conserved protein<br />
ydeH b1535 0.2575 0.0002 hypothetical protein<br />
ydeI b1536 0.3455 0.0164 conserved hypothetical protein<br />
ydeM b1497 0.7525 0.0152 putative enzyme<br />
ydeO b1499 0.3105 0.0065 putative ARAC-type regulatory protein<br />
ydeP b1501 0.5015 0.0287 acid resistance protein<br />
ydeS b1504 0.4386 0.0418 putative fimbrial-like protein<br />
ydeT b1505 0.5607 0.0195 putative outer membrane protein<br />
ydfJ b1543 1.4099 0.0448 YdfJ<br />
YdgE b1599 0.1355 0.0016 YdgE SMR Protein<br />
YdgF b1600 0.0941 0.0008 YdgF SMR protein; toxin <strong>of</strong> a putative toxin-antitoxin pair<br />
ydgK b1626 0.5783 0.0429 putative oxidoreductase<br />
ydgT b1625 0.3754 0.0341 conserved hypothetical protein<br />
ydhT b1669 0.6822 0.0135 conserved protein<br />
ydhY b1674 0.5117 0.0365 putative oxidoreductase, Fe-S subunit<br />
ydiA b1703 0.4514 0.0302 conserved protein<br />
ydiT b1700 0.5051 0.0079 putative ferredoxin<br />
ydjI b1773 0.5134 0.0380 putative aldolase<br />
ydjJ b1774 0.5684 0.0403 putative oxidoreductase<br />
yeaD b1780 2.3475 0.0375 conserved hypothetical protein<br />
yeaJ b1786 0.3536 0.0274 putative membrane protein<br />
yeaU b1800 0.6621 0.0455 putative tartrate dehydrogenase<br />
yebN b1821 0.3605 0.0299 putative membrane protein, terpenoid synthase-like<br />
yecT b1877 0.7868 0.0119 hypothetical protein<br />
yedL b1932 0.7234 0.0377 putative acyl-CoA N-acyltransferase<br />
yedW b1969 0.2224 0.0277 putative 2-component transcriptional response regulator<br />
yeeP b1999 1.5217 0.0256 putative histone<br />
yeeR b2001 3.3879 0.0270 hypothetical protein<br />
yegI b2070 0.5059 0.0139 putative chaperonin<br />
yegJ b2071 0.4400 0.0002 hypothetical protein<br />
yegZ b2083 0.4459 0.0458 hypothetical protein<br />
yehD b2111 1.2074 0.0153 putative fimbrial-like protein<br />
yehZ b2131 1.4371 0.0308 YehW/YehX/YehY/YehZ ABC transporter<br />
yeiC b2166 0.1058 0.0054 putative kinase<br />
yeiL b2163 0.2356 0.0045 yeiL transcriptional activator<br />
yeiS b2145 0.3579 0.0009 hypothetical protein<br />
yfaO b2251 0.6774 0.0483 putative enzyme (Nudix hydrolase)<br />
yfbE b2253 0.5011 0.0326 UDP-L-Ara4O C-4" transaminase<br />
102