Coordinated regulation of gene expression by E ... - Jacobs University
Coordinated regulation of gene expression by E ... - Jacobs University
Coordinated regulation of gene expression by E ... - Jacobs University
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APPENDIX I<br />
<strong>gene</strong> blattner ratio p-value Function<br />
A/B<br />
ygbT b2755 0.1586 0.0012 conserved hypothetical protein<br />
ygcG b2778 0.4150 0.0418 putative membrane protein<br />
ygcI b2757 0.0266 0.0000 hypothetical protein<br />
ygcJ b2758 0.4687 0.0197 conserved hypothetical protein<br />
ygcK b2759 0.0180 0.0001 hypothetical protein<br />
ygcL b2760 0.1023 0.0021<br />
hypothetical protein with possible relationship to novobiocin and deoxycholate<br />
resistance<br />
ygdR b2833 0.4092 0.0084 conserved hypothetical protein<br />
ygeQ b2863 0.6468 0.0449 hypothetical protein<br />
ygeW b2870 0.5789 0.0021 putative carbamoyl transferase<br />
yghJ b2973 0.4626 0.0310 predicted inner membrane lipoprotein<br />
yghR b2984 1.2529 0.0320 conserved protein<br />
ygiL b3043 0.0354 0.0001 putative fimbrial-like protein<br />
ygjD b3064 1.4330 0.0151 putative O-sialoglycoprotein endopeptidase<br />
yhaB b3120 0.6588 0.0079 conserved protein<br />
yhcH b3221 1.4678 0.0226 conserved hypothetical protein; <strong>gene</strong> is in sialic acid catabolic operon<br />
yhdH b3253 1.5233 0.0446 putative dehydrogenase<br />
yhfK b3358 0.7711 0.0070 hypothetical protein<br />
yhfL b3369 0.1799 0.0003 hypothetical protein<br />
yhhI b3484 0.1140 0.0042 conserved protein similar to H-repeat-associated proteins<br />
yhiK b3489 0.5909 0.0164 hypothetical protein<br />
yhjB b3520 0.6632 0.0240 putative regulator<br />
yhjH b3525 15.5314 0.0446 protein involved in flagellar function<br />
yhjR b3535 0.3106 0.0149 hypothetical protein<br />
yiaA b3562 0.3589 0.0101 hypothetical protein<br />
yiaJ b3574 1.4560 0.0188 YiaJ transcriptional repressor<br />
yiaN b3578 0.5883 0.0029 YiaMNO Binding Protein-dependent Secondary (TRAP) Transporter<br />
yiaT b3584 0.3441 0.0061 putative outer membrane protein<br />
yiaU b3585 0.3785 0.0049 putative transcriptional regulator LYSR-type<br />
yiaV b3586 0.5890 0.0043 putative membrane protein<br />
yiaW b3587 0.2799 0.0038 hypothetical protein<br />
yibA b3594 0.1903 0.0047 putative lyase<br />
yibJ b3595 0.2186 0.0238 hypothetical protein<br />
yieL b3719 0.5420 0.0231 putative xylanase<br />
yigF b3817 0.2284 0.0094 conserved hypothetical protein<br />
yigZ b3848 1.3342 0.0497 putative elongation factor<br />
yihN b3874 0.4333 0.0156 YihN MFS transporter<br />
yihO b3876 0.6279 0.0411 YihO GPH transporter<br />
yihQ b3878 0.6251 0.0380 putative glycosidase<br />
yiiG b3896 0.2402 0.0073 conserved protein<br />
yiiS b3922 0.2364 0.0157 conserved hypothetical protein<br />
yiiU b3928 1.3852 0.0299 conserved hypothetical protein<br />
yjbE b4026 0.0840 0.0029 conserved hypothetical protein<br />
yjbM b4048 0.4310 0.0137 conserved hypothetical protein<br />
yjeB b4178 1.6962 0.0415 conserved protein with a Winged helix domain<br />
yjeJ b4145 0.3840 0.0307 conserved protein<br />
yjeM b4156 0.2229 0.0057 YjeM APC transporter<br />
yjeN b4157 0.3408 0.0038 conserved hypothetical protein<br />
yjfJ b4182 0.6175 0.0334 conserved protein<br />
yjfK b4183 0.4529 0.0043 conserved hypothetical protein<br />
yjfL b4184 0.5766 0.0073 hypothetical protein<br />
yjfN b4188 1.3712 0.0202 conserved hypothetical protein<br />
yjfZ b4204 0.3394 0.0322 hypothetical protein<br />
yjgM b4256 0.4628 0.0240 putative acyltransferase<br />
yjgN b4257 0.5071 0.0145 putative membrane protein possible involved in transport<br />
yjhB b4279 0.3122 0.0246 YjhB MFS transporter<br />
yjhC b4280 0.3612 0.0064 KpLE2 phage-like element; putative NAD(P)-binding dehydrogenase<br />
177