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Coordinated regulation of gene expression by E ... - Jacobs University

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INTRODUCTION<br />

Figure 3: Structural pr<strong>of</strong>iles <strong>of</strong> sigma70 and sigma54 promoter regions.<br />

Comparison <strong>of</strong> sigma70 specific promoter regions with sigma54 regions show that sigma70 promoters<br />

have more intrinsic curvature and are also more easily deformable than sigma54 promoters [Pedersen,<br />

2000 ].<br />

1.2.2 Gene promoters respond distinctly to changes <strong>of</strong><br />

supercoiling<br />

One <strong>of</strong> the extrinsic determinants <strong>of</strong> the promoter activity is the superhelical density <strong>of</strong><br />

the DNA. Negative supercoiling <strong>of</strong> the DNA provides the thermodynamic driving force<br />

that is required for unwinding the DNA double helix during the initiation process and it<br />

7

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