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may contain 2 tables, a plates and a wells table. Clicking on a row in the plates table exposes the well data associated with the selected plate. plate P1002, we click plate 1’s row in the Plates table, and that information is loaded into the Wells table. Administrator Tables are arranged in the data viewer by the hierarchy defined in the assay definition. That is, tables which are higher in the hierarchy are found at the top of the data browser and nested tables are displayed lower. If the number of tables displayed exceeds 4, a button allows you to bring the hidden tables back into view. Changing the selection is a table higher in the hierarchy cascades the change through the child tables. Thus, to see data for plate P1004 instead of NOTE: Data is only editable, and most actions are only available, from the main grid (by default the most detailed table open (found at the bottom of the data viewer)). To bring a table from the top into the main grid, double click on its title bar or click the i icon. Related Plate Data If a plate icon appears in the upper right of the data viewer, a plate view is available for the open table. To view that plate data: 1. Click the plate icon. The Plate viewer appears. 2. Click on the plate barcode associated with the plate you would like to view. Related Graphical Data If a graph icon appears in the upper right of the data viewer, this indicates one or more graphs are available from that table. 108•BioAssay CambridgeSoft Protocols
To view the graph: 1. Click the graph icon. The graph viewer appears. 2. Click on the graph you would like to view. Protocol Definitions The Protocol Definition is accessed by clicking on the Definition tab in the data viewer. This is where the protocol's structure and calculations are defined. The protocol tables must be defined before importing data. For more information about defining tables for a protocol, please see “Defining Tables and Fields” on page 113. When a protocol Definition folder is opened, the protocol structure is displayed in the right frame. The tree in the protocol definition frame groups information in four ways: • Primary Tables • Summary Tables • Additional Tables • File Import Templates • Graph Templates Primary Tables Tables are arranged in levels. A table situated lower in the tree contains rows which hold aggregate data of one row in a higher table. For example, a plate based protocol has at least two tables: Plates and Wells. The Plates table is higher on the tree than the Wells table. This makes sense because each plate contains several wells. The Plates table defines plate attributes such as the barcode while the Wells table holds data associated with a particular well, such as the well ID. Each field falls under the appropriate table in the tree. Clicking on a table name or field name prompts the application to display details about the table or field under the appropriate tab to the right of the tree. Parent Tables Every primary table in a protocol, except the table at the top of the hierarchy, has a parent. The parent table is the table found in the next highest level in the protocol tree. For example, in the image above, the Summary Table is a parent of the WELLS table. Because the Summary table is at the very top of the hierarchy, the Summary table does not have a parent. In this example, and in any parent table example, the parent table holds information summarizing the data in tables below it. For example, the Summary table contains a Compound ID field because all of the data in the WELLS table have a common Compound ID. Child Tables Every table in a protocol, except the table at the bottom of the hierarchy, has a child. Child tables are named as such because their data is summarized in some way by its parent. For example, the WELLS ChemOffice Enterprise Workgroup & Databases 2005 BioAssay • 109 Protocols
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