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27 Applications of Quantitative Microscopy in Plant Surface Microbiology 543<br />

6.7 CMEIAS v. 3.0: Spatial Scale Analysis of in Situ Quorum Sensing by<br />

Root-Colonizing Bacteria<br />

In the fifth example, CMEIAS is being used to extract information that sheds<br />

new light on the spatial scale at which cell-cell communication of quorum<br />

sensing occurs in situ during bacterial colonization of roots. This work is<br />

being done in a collaboration of the author with Prof. Anton Hartmann,<br />

Stephan Gantner and Christine Duerr in Germany. Confocal fluorescence<br />

images of roots are acquired to locate the positions of the red fluorescent protein<br />

reporter strain of bacteria that produces and secretes the acyl homoserine<br />

lactone quorum signal (source cells) and the green GFP-reporter strain of<br />

bacteria that cannot produce these signal molecules, but is nevertheless activated<br />

by them (sensor cells). The range of distances between each green sensor<br />

cell and its nearest red source cell neighbor then becomes a measure of the<br />

spatial scale at which the cell-to-cell communication of quorum-sensing signal<br />

molecules occurs in situ during root colonization. Early indications are<br />

that this spatial scale is close to the same range found for spatial dependence<br />

in root colonization as described in Fig. 15 above. Figure 17 further illustrates<br />

Fig. 17. CMEIAS/GS+<br />

spatial geostatistical<br />

analysis of in situ<br />

quorum sensing<br />

among neighboring<br />

bacteria colonizing<br />

the root <strong>surface</strong>. A<br />

Dot map indicating<br />

the location of bacteria<br />

that provide the<br />

source of the extracellular<br />

quorum signal<br />

molecule (N-acyl<br />

homoserine lactone).<br />

Scale bar 10 mm. B 2-<br />

D interpolation kriging<br />

map of the predicted<br />

gradients of<br />

the quorum sensing<br />

molecule in situ on<br />

the root <strong>surface</strong> based<br />

on the localized cluster<br />

indices of colonized<br />

bacteria

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