plant surface microbiology.pdf

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Horizontal gene transfer (HGT) 4, 191 Horizontal growth station 505 Host lectin 505, 513 Hosts 268 Humus 53 Hyaline 593 Hybridization 569 Hybridization analysis 584 Hybridization hypothesis 172 Hydanthocidin 82 Hydrolytic Enzymes 164, 165 Hydrophobin 220 Hydroponics 432 Hydroxamate 90 Hydroxamate siderophores 90 Hydroxyapetite 84 Hymenomycetes 595 Hymenoscyphus ericae 79 Hyperdermium sp. 159 Hyperdermium bertonii 159 Hypertrophied 166 Hypha 238, 269, 593 Hyphal attachment 218 Hyphal tip 311 Hyphosphere 61, 197, 358 Hypocrella sp. 159 H. africana 159 H. gaertneriana 159 H. schizostachyi 159 I Image analysis 526, 544 Immunoelectron microscopy 509, 517 Immunofluorescence labelling 449, 453 Immunofluorescence microscopy 6 In situ gene expression 525, 526 In situ microbial ecology 504, 529, 544 Incubation 251 Indigenous microflora 503, 530, 535 Indirect immunofluorescence microscopy 298 Infection process 504, 529 Infection-related biological activity 505, 516, 520 Inflorescence primordium 166 Inflorescens 248 Inhibitory zone 434 Inoculation 251 Interface 270 Intergenic spacer (IGS) region 462 Intergrin-adhesion-receptor 2 Internal transcribed spacer (ITS) 75 Interhyphal spaces 200 Interwoven 593 Intracellular 238 Intracellular acid phosphatase 606 Intraradical hyphae 335, 337 Introns 567 Ion transport 568 IPTG 576 IRS 1-like protein 590 Isocitrate lyase 580 Isoflavonoids 102 Isolated cuticle 475, 476 Isolation of bacillus 434 Isolation of pseudomonads 433 ITS 551 ITS-RFLP 559 J Juglans sp. 146 Juncaceae 76 Subject Index 621 K Kanamycin resistance 187, 188 Kinases 124 Kinesin 309, 311 Kinetin 170 Klebsiella 83, 89 L Laccaria 395, 410, 412, 414, 416, 421 L. amethystea 212 L. amethystina 260 L. bicolor 201, 581, 590 L. proxima 201 Lactarius delicious 260 L. deterrimus 260 L. necator 260 L. rufus 260 L. subdulcis 200 L. torminosus 260, 597 L. vellereus 200 Lac tonohydrolase 590 Lactose mannose 602 Lambda zap 569 Laminar flow hood 576 Larix decidua 200 LB agar 576 LB/Carbenicllin plates 577 LB/MgSO4 agar 576 LbAut7 590 LCO receptor 112 Leaf <strong>surface</strong> 145, 471
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PLANT SURFACE MICROBIOLOGY
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Professor Dr. Ajit Varma Director A
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VI ology. The basic concepts in pla
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VIII Contents 6.1 Abiotic Factors .
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X Section B Contents 7 The Function
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XII 3 Impact of Genetically Modifie
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XIV 4.9 Arabidopsis thaliana . . .
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XVI Contents 4.1 Diversity of Arbus
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XVIII 6.2 Role and Properties of Gl
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XX Contents 4.1 Isolated Cuticles a
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XXII Contents 6.5 CMEIAS v. 3.0: In
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Contributors Abbott, Lynette K. Sch
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Ghimire, Sita R. Centre for Researc
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Meyer, William Department of Plant
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Tripathi,K.K. Department of Biotech
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2 Ajit Varma et al. technical diffi
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4 Ajit Varma et al. prowazekii with
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6 Ajit Varma et al. parasite on oth
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8 Ajit Varma et al. interaction wit
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10 Ajit Varma et al. mative, quanti
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2 Root Colonisation Following Seed
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Fig. 1. Colonisation tube system (f
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3.4 Seed Inoculation Seeds are plac
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selection using GFP-expressing bact
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plant roots from the sand, these ca
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tant for colonisation, but neither
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6.2 Biotic Factors 2 Root Colonisat
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36 CH 4 Ralf Conrad O 2 CH 4 methan
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38 Ralf Conrad Finally, aquatic pla
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40 Ralf Conrad Fig. 3. Emission of
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42 Ralf Conrad The general coloniza
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44 Ralf Conrad acceptor. However, l
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46 Ralf Conrad Brioukhanov A, Netru
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48 Ralf Conrad King GM, Garey MA (1
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50 Ralf Conrad Yao H, Conrad R (200
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52 Galdino Andrade or the transform
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54 Galdino Andrade and 2-15 % prote
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56 Galdino Andrade organic nitrogen
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58 SO4 Galdino Andrade Assimilatory
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60 Galdino Andrade phosphate compou
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62 Galdino Andrade In our laborator
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64 Galdino Andrade Fig. 9. Bacteria
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66 Galdino Andrade Plants Carbon De
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68 Galdino Andrade organic phosphat
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5 Diversity and Functions of Soil M
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6 Signalling in the Rhizobia-Legume
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acid, ethylene and jasmonates are i
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increases the activity of the bdhA
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which are perhaps intermediates in
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122 Galdino Andrade Some studies ha
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124 Galdino Andrade Nutrient limita
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126 Galdino Andrade significant qua
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128 Galdino Andrade decrease in the
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130 Galdino Andrade References and
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132 Galdino Andrade Smith RA, Couch
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134 Bernard R. Glick and Donna M. P
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146 Lukas Schreiber, Ursula Krimm a
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158 James F. White Jr. et al. endop
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160 James F. White Jr. et al. 4.3 P
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162 James F. White Jr. et al. Fig.
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164 James F. White Jr. et al. leaf
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166 James F. White Jr. et al. cutic
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168 James F. White Jr. et al. 6.3 M
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170 James F. White Jr. et al. Fig.
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172 James F. White Jr. et al. form
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174 James F. White Jr. et al. itive
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176 James F. White Jr. et al. Clay
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178 James F. White Jr. et al. White
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180 Michael Kaldorf et al. poplar,
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182 Table 1: Studies assessing the
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184 Michael Kaldorf et al. 1995). S
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186 Michael Kaldorf et al. chitinas
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188 Michael Kaldorf et al. resistan
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190 Michael Kaldorf et al. the GPD/
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192 Michael Kaldorf et al. Referenc
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194 Michael Kaldorf et al. Hoffmann
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196 Michael Kaldorf et al. van Rhij
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198 Rüdiger Hampp and Andreas Maie
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212 Ingrid Kottke Fig. 1. Ectomycor
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214 Ingrid Kottke nificant structur
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216 d Ingrid Kottke rcc ph rccw ccw
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218 Ingrid Kottke Fig. 6. Scheme il
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220 Ingrid Kottke Picea mariana Mil
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222 Ingrid Kottke suberin digestion
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224 Ingrid Kottke When dissolving t
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226 Ingrid Kottke Oh KI, Melville L
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228 respect to soral morphology,tel
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230 Robert Bauer and Franz Oberwink
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238 Giang Huong Pham et al. The fun
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240 Giang Huong Pham et al. reactio
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242 Giang Huong Pham et al. Fig. 5.
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244 Giang Huong Pham et al. Fig. 6.
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246 Treated roots were colonized by
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248 Giang Huong Pham et al. Fig. 9a
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250 Giang Huong Pham et al. Fig. 11
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252 Giang Huong Pham et al. 4.6 Tim
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260 Giang Huong Pham et al. longed
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264 Giang Huong Pham et al. Referen
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16 Cellular Basidiomycete-Fungus In
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Fig. 1. Hypha of Colacogloea peniop
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4.2 Fusion-Interaction 16 Cellular
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Fig. 12. Transverse section through
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282 Sita R. Ghimire and Kevin D. Hy
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294 Marjatta Raudaskoski, Mika Tark
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19 Functional Diversity of Arbuscul
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352 José-Miguel Barea et al. 1994)
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354 José-Miguel Barea et al. 1992;
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356 José-Miguel Barea et al. 5 Rea
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358 José-Miguel Barea et al. 1992;
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360 José-Miguel Barea et al. AM-de
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362 José-Miguel Barea et al. pound
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364 José-Miguel Barea et al. Berta
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366 José-Miguel Barea et al. Giani
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368 José-Miguel Barea et al. Lynch
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370 José-Miguel Barea et al. Toro
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21 Carbohydrates and Nitrogen: Nutr
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394 A. Javelle et al. 1.2 Nitrogen
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396 A. Javelle et al. genes were re
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398 A. Javelle et al. gest that myc
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400 A. Javelle et al. 3.3 Isolation
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402 A. Javelle et al. lular Gln amo
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404 A. Javelle et al. In Paxillus i
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406 A. Javelle et al. capabilities
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408 A. Javelle et al. as two other
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410 A. Javelle et al. Glu. Glutamin
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412 A. Javelle et al. Table 1. Rela
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414 A. Javelle et al. catalysed by
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416 A. Javelle et al. GLU2 is expre
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418 A. Javelle et al. gen to plants
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420 A. Javelle et al. (Hoshida et a
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422 A. Javelle et al. Bajwa R, Abua
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424 A. Javelle et al. Garnier A, Be
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426 A. Javelle et al. Limami A, Phi
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428 A. Javelle et al. Ritchie RJ, G
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23 Visualisation of Rhizosphere Int
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5 Microscope Analysis of Infection
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cells by hyphae. No penetration str
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24 Microbial Community Analysis in
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titative data about the community c
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3.5 Community Analysis by Fatty Aci
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472 Contactangle Daniel Knoll and L
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474 Daniel Knoll and Lukas Schreibe
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478 A cuticle B Daniel Knoll and Lu
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26 Quantifying the Impact of ACC De
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27 Applications of Quantitative Mic
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28 Analysis of Microbial Population
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- Primers for ITS amplification: FG
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6 ITS-RFLP analysis 28 Analysis of
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7 Statistical analysis 28 Analysis
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Software requirements - Scoring of
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568 Gopi K. Podila and Luisa Lanfra
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572 Kbp 5.1 - 2 - 1.3 - Gopi K. Pod
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574 Kbp 5.1 - 2 - 0.9 - Gopi K. Pod
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Page 1218: 594 Giang Huong Pham et al. Fig. 1.
Page 1222: 596 Giang Huong Pham et al. Table 1
Page 1226: 598 Giang Huong Pham et al. nucleic
Page 1230: 600 Giang Huong Pham et al. days wi
Page 1234: 602 Giang Huong Pham et al. Table 3
Page 1238: 604 Giang Huong Pham et al. The mor
Page 1242: 606 phatase in addition to the cons
Page 1246: 608 H3BO3 1.55 MnSO . 4 H2O 0.85 Zn
Page 1250: 610 CuSO 4 . 5H2 O 0.25 CoCl 2 . H2
Page 1254: 612 Giang Huong Pham et al. wrinkle
Page 1258: Subject Index A AAD 590 Abies (fir)
Page 1262: Botanophila 171 Bradyrhizobium 73,
Page 1266: Ectendomycorrhizas 76 Ectomycorrhiz
Page 1272: 622 Subject Index Leaf surface colo
Page 1276: 624 Subject Index Penicillium sp. 7
Page 1280: 626 Subject Index Salmon sperm DNA
Page 1284: 628 Subject Index Y Yellow fluoresc
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